Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC6.38□□□□□ -1.39
SHISA3A0PJX4 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
SHISA3A0PJX4 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC6.38□□□□□ -1.39
SHISA3A0PJX4 SRSF5-209ENST00000555349 565 ntTSL 4 BASIC6.38□□□□□ -1.39
SHISA3A0PJX4 LINC02310-201ENST00000556762 572 ntTSL 4 BASIC6.38□□□□□ -1.39
SHISA3A0PJX4 ZNF519P3-201ENST00000557158 1032 ntBASIC6.38□□□□□ -1.39
SHISA3A0PJX4 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC6.38□□□□□ -1.39
SHISA3A0PJX4 SAXO2-204ENST00000565432 811 ntAPPRIS ALT2 TSL 4 BASIC6.38□□□□□ -1.39
SHISA3A0PJX4 AC092325.1-201ENST00000566449 554 ntBASIC6.38□□□□□ -1.39
SHISA3A0PJX4 PPIAP14-201ENST00000577627 496 ntBASIC6.38□□□□□ -1.39
SHISA3A0PJX4 ANKRD20A5P-203ENST00000580200 566 ntTSL 5 BASIC6.38□□□□□ -1.39
SHISA3A0PJX4 OR4K7P-201ENST00000580232 945 ntBASIC6.38□□□□□ -1.39
SHISA3A0PJX4 RN7SL237P-201ENST00000580912 287 ntBASIC6.38□□□□□ -1.39
SHISA3A0PJX4 KCTD2-206ENST00000581589 993 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
SHISA3A0PJX4 AC091946.2-201ENST00000606105 291 ntBASIC6.38□□□□□ -1.39
SHISA3A0PJX4 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC6.38□□□□□ -1.39
SHISA3A0PJX4 MIR6737-201ENST00000617385 70 ntBASIC6.38□□□□□ -1.39
SHISA3A0PJX4 AC074029.3-201ENST00000618623 312 ntBASIC6.38□□□□□ -1.39
SHISA3A0PJX4 LINC02086-204ENST00000628006 786 ntTSL 5 BASIC6.38□□□□□ -1.39
SHISA3A0PJX4 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC6.38□□□□□ -1.39
SHISA3A0PJX4 AC116618.1-201ENST00000634617 774 ntBASIC6.38□□□□□ -1.39
SHISA3A0PJX4 ADI1-202ENST00000382093 3870 ntTSL 2 BASIC6.38□□□□□ -1.39
SHISA3A0PJX4 AL512604.2-201ENST00000426946 1314 ntTSL 5 BASIC6.38□□□□□ -1.39
SHISA3A0PJX4 PIGN-238ENST00000639758 4239 ntTSL 5 BASIC6.38□□□□□ -1.39
SHISA3A0PJX4 DPYD-202ENST00000370192 4412 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
SHISA3A0PJX4 ZNF763-202ENST00000358987 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
SHISA3A0PJX4 ATP8A2P3-201ENST00000426792 1536 ntBASIC6.38□□□□□ -1.39
SHISA3A0PJX4 AL450426.1-201ENST00000635678 1602 ntTSL 5 BASIC6.38□□□□□ -1.39
SHISA3A0PJX4 CCNC-204ENST00000482541 1704 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
SHISA3A0PJX4 ZNF790-206ENST00000613249 2183 ntAPPRIS P1 TSL 4 BASIC6.38□□□□□ -1.39
SHISA3A0PJX4 IL31RA-201ENST00000297015 2695 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
SHISA3A0PJX4 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC6.38□□□□□ -1.39
SHISA3A0PJX4 GABRR1-206ENST00000611484 3259 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
SHISA3A0PJX4 SGK3-201ENST00000345714 4055 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
SHISA3A0PJX4 BDNF-209ENST00000420794 4176 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
SHISA3A0PJX4 LINC01630-208ENST00000635680 4363 ntTSL 5 BASIC6.38□□□□□ -1.39
SHISA3A0PJX4 FRMD5-211ENST00000618556 5059 ntTSL 5 BASIC6.38□□□□□ -1.39
SHISA3A0PJX4 EZH1-201ENST00000415827 4608 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
SHISA3A0PJX4 EZH1-202ENST00000428826 4623 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
SHISA3A0PJX4 UBAP2-201ENST00000360802 4284 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
SHISA3A0PJX4 SLC14A1-201ENST00000321925 3971 ntAPPRIS P3 TSL 1 (best) BASIC6.37□□□□□ -1.39
SHISA3A0PJX4 FLRT3-201ENST00000341420 3971 ntAPPRIS P1 TSL 2 BASIC6.37□□□□□ -1.39
SHISA3A0PJX4 PAICS-208ENST00000514888 3340 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
SHISA3A0PJX4 ANKFN1-201ENST00000318698 2426 ntAPPRIS P2 TSL 2 BASIC6.37□□□□□ -1.39
SHISA3A0PJX4 CDY1-201ENST00000306609 2321 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
SHISA3A0PJX4 CDY1B-201ENST00000306882 2321 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
SHISA3A0PJX4 THRB-IT1-201ENST00000425296 1754 ntTSL 2 BASIC6.37□□□□□ -1.39
SHISA3A0PJX4 TTTY15-202ENST00000440408 5284 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
SHISA3A0PJX4 AC107067.1-201ENST00000500009 1654 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
SHISA3A0PJX4 UGT2B27P-201ENST00000505092 1620 ntBASIC6.37□□□□□ -1.39
SHISA3A0PJX4 AL121949.2-201ENST00000403446 1548 ntBASIC6.37□□□□□ -1.39
SHISA3A0PJX4 DTNA-204ENST00000348997 4518 ntAPPRIS P3 TSL 1 (best) BASIC6.37□□□□□ -1.39
SHISA3A0PJX4 SLC6A14-202ENST00000598581 4520 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
SHISA3A0PJX4 OFD1P15Y-201ENST00000411536 1392 ntBASIC6.37□□□□□ -1.39
SHISA3A0PJX4 OR2G3-201ENST00000320002 930 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
SHISA3A0PJX4 RNA5SP463-201ENST00000363030 120 ntBASIC6.37□□□□□ -1.39
SHISA3A0PJX4 SSX6-201ENST00000376932 562 ntBASIC6.37□□□□□ -1.39
SHISA3A0PJX4 AL672167.2-201ENST00000377164 879 ntBASIC6.37□□□□□ -1.39
SHISA3A0PJX4 RNY3P10-201ENST00000384764 102 ntBASIC6.37□□□□□ -1.39
SHISA3A0PJX4 AL353151.1-201ENST00000402406 604 ntBASIC6.37□□□□□ -1.39
SHISA3A0PJX4 ERMN-202ENST00000409216 746 ntTSL 4 BASIC6.37□□□□□ -1.39
SHISA3A0PJX4 AL157698.1-201ENST00000415190 1011 ntBASIC6.37□□□□□ -1.39
SHISA3A0PJX4 AL353651.1-201ENST00000415629 355 ntTSL 5 BASIC6.37□□□□□ -1.39
SHISA3A0PJX4 AC011753.4-201ENST00000417974 311 ntBASIC6.37□□□□□ -1.39
SHISA3A0PJX4 RBM22P7-201ENST00000421321 280 ntBASIC6.37□□□□□ -1.39
SHISA3A0PJX4 AC006017.1-201ENST00000424630 673 ntTSL 3 BASIC6.37□□□□□ -1.39
SHISA3A0PJX4 LINC01811-202ENST00000424786 787 ntTSL 5 BASIC6.37□□□□□ -1.39
SHISA3A0PJX4 PA2G4P6-201ENST00000438325 1197 ntBASIC6.37□□□□□ -1.39
SHISA3A0PJX4 AC122718.1-201ENST00000439448 744 ntBASIC6.37□□□□□ -1.39
SHISA3A0PJX4 AL022157.1-201ENST00000439622 665 ntTSL 2 BASIC6.37□□□□□ -1.39
SHISA3A0PJX4 UBE2V1P7-201ENST00000446395 340 ntBASIC6.37□□□□□ -1.39
SHISA3A0PJX4 WASF1P1-201ENST00000447560 1131 ntBASIC6.37□□□□□ -1.39
SHISA3A0PJX4 AL161646.1-201ENST00000447860 1013 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
SHISA3A0PJX4 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC6.37□□□□□ -1.39
SHISA3A0PJX4 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC6.37□□□□□ -1.39
SHISA3A0PJX4 SSXP1-201ENST00000453640 473 ntBASIC6.37□□□□□ -1.39
SHISA3A0PJX4 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC6.37□□□□□ -1.39
SHISA3A0PJX4 AL603882.1-201ENST00000463059 681 ntBASIC6.37□□□□□ -1.39
SHISA3A0PJX4 FAM133DP-201ENST00000464802 691 ntBASIC6.37□□□□□ -1.39
SHISA3A0PJX4 RN7SL160P-201ENST00000468558 284 ntBASIC6.37□□□□□ -1.39
SHISA3A0PJX4 RN7SL241P-201ENST00000482973 236 ntBASIC6.37□□□□□ -1.39
SHISA3A0PJX4 RPSAP52-201ENST00000489520 1144 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
SHISA3A0PJX4 AC006499.5-201ENST00000505037 514 ntBASIC6.37□□□□□ -1.39
SHISA3A0PJX4 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC6.37□□□□□ -1.39
SHISA3A0PJX4 AC005699.1-204ENST00000509244 747 ntTSL 5 BASIC6.37□□□□□ -1.39
SHISA3A0PJX4 GAPDHP44-201ENST00000513513 1007 ntBASIC6.37□□□□□ -1.39
SHISA3A0PJX4 RPL10P18-201ENST00000519384 309 ntBASIC6.37□□□□□ -1.39
SHISA3A0PJX4 NPM1P6-201ENST00000521088 871 ntBASIC6.37□□□□□ -1.39
SHISA3A0PJX4 GZMB-205ENST00000526004 819 ntTSL 3 BASIC6.37□□□□□ -1.39
SHISA3A0PJX4 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
SHISA3A0PJX4 ZNF503-AS1-205ENST00000530606 549 ntTSL 4 BASIC6.37□□□□□ -1.39
SHISA3A0PJX4 CASP1-216ENST00000534497 825 ntTSL 5 BASIC6.37□□□□□ -1.39
SHISA3A0PJX4 PDCL3P1-201ENST00000534575 734 ntBASIC6.37□□□□□ -1.39
SHISA3A0PJX4 AC022075.2-201ENST00000535911 562 ntTSL 4 BASIC6.37□□□□□ -1.39
SHISA3A0PJX4 AC005832.3-201ENST00000537929 631 ntBASIC6.37□□□□□ -1.39
SHISA3A0PJX4 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC6.37□□□□□ -1.39
SHISA3A0PJX4 BMS1P8-201ENST00000565049 1178 ntBASIC6.37□□□□□ -1.39
SHISA3A0PJX4 AC104581.3-201ENST00000573621 348 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
SHISA3A0PJX4 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC6.37□□□□□ -1.39
SHISA3A0PJX4 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC6.37□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 137.6 ms