Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 ALB-202ENST00000401494 1659 ntTSL 5 BASIC4.51□□□□□ -1.69
HLA-DRB4X5D2U9 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
HLA-DRB4X5D2U9 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC4.51□□□□□ -1.69
HLA-DRB4X5D2U9 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
HLA-DRB4X5D2U9 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC4.51□□□□□ -1.69
HLA-DRB4X5D2U9 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC4.51□□□□□ -1.69
HLA-DRB4X5D2U9 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
HLA-DRB4X5D2U9 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
HLA-DRB4X5D2U9 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC4.5□□□□□ -1.69
HLA-DRB4X5D2U9 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
HLA-DRB4X5D2U9 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
HLA-DRB4X5D2U9 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC4.5□□□□□ -1.69
HLA-DRB4X5D2U9 TAF12-202ENST00000373824 1334 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
HLA-DRB4X5D2U9 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
HLA-DRB4X5D2U9 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
HLA-DRB4X5D2U9 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC4.5□□□□□ -1.69
HLA-DRB4X5D2U9 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
HLA-DRB4X5D2U9 AC016907.2-203ENST00000455424 3563 ntTSL 3 BASIC4.5□□□□□ -1.69
HLA-DRB4X5D2U9 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
HLA-DRB4X5D2U9 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
HLA-DRB4X5D2U9 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
HLA-DRB4X5D2U9 RNU1-134P-201ENST00000362935 165 ntBASIC4.5□□□□□ -1.69
HLA-DRB4X5D2U9 PKIB-203ENST00000368446 556 ntTSL 2 BASIC4.5□□□□□ -1.69
HLA-DRB4X5D2U9 TPT1-204ENST00000379060 764 ntTSL 5 BASIC4.5□□□□□ -1.69
HLA-DRB4X5D2U9 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC4.5□□□□□ -1.69
HLA-DRB4X5D2U9 ZEB2-AS1-203ENST00000428623 436 ntTSL 2 BASIC4.5□□□□□ -1.69
HLA-DRB4X5D2U9 RPSAP65-201ENST00000429660 595 ntBASIC4.5□□□□□ -1.69
HLA-DRB4X5D2U9 OR52I1-201ENST00000450052 1050 ntBASIC4.5□□□□□ -1.69
HLA-DRB4X5D2U9 AC016027.4-201ENST00000450866 277 ntBASIC4.5□□□□□ -1.69
HLA-DRB4X5D2U9 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC4.5□□□□□ -1.69
HLA-DRB4X5D2U9 AC124945.1-201ENST00000485133 188 ntBASIC4.5□□□□□ -1.69
HLA-DRB4X5D2U9 AC083795.1-201ENST00000491760 320 ntBASIC4.5□□□□□ -1.69
HLA-DRB4X5D2U9 AC104779.1-201ENST00000503557 441 ntTSL 3 BASIC4.5□□□□□ -1.69
HLA-DRB4X5D2U9 AC092349.1-201ENST00000504903 310 ntBASIC4.5□□□□□ -1.69
HLA-DRB4X5D2U9 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC4.5□□□□□ -1.69
HLA-DRB4X5D2U9 NPM1P21-201ENST00000513394 762 ntBASIC4.5□□□□□ -1.69
HLA-DRB4X5D2U9 PRMT5P1-201ENST00000514351 598 ntBASIC4.5□□□□□ -1.69
HLA-DRB4X5D2U9 NPIPA8-202ENST00000541810 1131 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
HLA-DRB4X5D2U9 A2MP1-201ENST00000543404 1201 ntTSL 5 BASIC4.5□□□□□ -1.69
HLA-DRB4X5D2U9 NPIPA3-203ENST00000552140 1053 ntTSL 5 BASIC4.5□□□□□ -1.69
HLA-DRB4X5D2U9 NPIPA2-203ENST00000553201 1053 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
HLA-DRB4X5D2U9 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC4.5□□□□□ -1.69
HLA-DRB4X5D2U9 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC4.5□□□□□ -1.69
HLA-DRB4X5D2U9 ZNF174-204ENST00000572544 1002 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
HLA-DRB4X5D2U9 MIR3154-201ENST00000577829 84 ntBASIC4.5□□□□□ -1.69
HLA-DRB4X5D2U9 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC4.5□□□□□ -1.69
HLA-DRB4X5D2U9 AL645933.2-201ENST00000606743 1207 ntBASIC4.5□□□□□ -1.69
HLA-DRB4X5D2U9 AC092681.3-201ENST00000609463 678 ntBASIC4.5□□□□□ -1.69
HLA-DRB4X5D2U9 PROX1-AS1-219ENST00000610094 791 ntTSL 5 BASIC4.5□□□□□ -1.69
HLA-DRB4X5D2U9 AL512652.1-201ENST00000619006 500 ntBASIC4.5□□□□□ -1.69
HLA-DRB4X5D2U9 AC048341.3-201ENST00000619323 491 ntBASIC4.5□□□□□ -1.69
HLA-DRB4X5D2U9 AC138965.3-201ENST00000623875 498 ntBASIC4.5□□□□□ -1.69
HLA-DRB4X5D2U9 AC073488.6-201ENST00000632293 754 ntBASIC4.5□□□□□ -1.69
HLA-DRB4X5D2U9 OR2AK2-202ENST00000641852 1008 ntAPPRIS P2 BASIC4.5□□□□□ -1.69
HLA-DRB4X5D2U9 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC4.5□□□□□ -1.69
HLA-DRB4X5D2U9 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC4.5□□□□□ -1.69
HLA-DRB4X5D2U9 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC4.5□□□□□ -1.69
HLA-DRB4X5D2U9 AL020995.1-201ENST00000427524 1680 ntTSL 2 BASIC4.5□□□□□ -1.69
HLA-DRB4X5D2U9 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
HLA-DRB4X5D2U9 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC4.5□□□□□ -1.69
HLA-DRB4X5D2U9 PAK3-202ENST00000360648 2241 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
HLA-DRB4X5D2U9 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC4.5□□□□□ -1.69
HLA-DRB4X5D2U9 MTCO1P28-201ENST00000574177 1528 ntBASIC4.5□□□□□ -1.69
HLA-DRB4X5D2U9 AC027279.4-201ENST00000624371 2072 ntBASIC4.5□□□□□ -1.69
HLA-DRB4X5D2U9 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC4.5□□□□□ -1.69
HLA-DRB4X5D2U9 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC4.5□□□□□ -1.69
HLA-DRB4X5D2U9 P2RY14-202ENST00000424796 1780 ntAPPRIS P1 TSL 2 BASIC4.5□□□□□ -1.69
HLA-DRB4X5D2U9 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
HLA-DRB4X5D2U9 LINC00320-204ENST00000437238 2004 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
HLA-DRB4X5D2U9 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
HLA-DRB4X5D2U9 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
HLA-DRB4X5D2U9 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
HLA-DRB4X5D2U9 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
HLA-DRB4X5D2U9 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
HLA-DRB4X5D2U9 SSXP3-201ENST00000442971 1300 ntBASIC4.49□□□□□ -1.69
HLA-DRB4X5D2U9 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC4.49□□□□□ -1.69
HLA-DRB4X5D2U9 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC4.49□□□□□ -1.69
HLA-DRB4X5D2U9 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
HLA-DRB4X5D2U9 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
HLA-DRB4X5D2U9 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
HLA-DRB4X5D2U9 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
HLA-DRB4X5D2U9 LINC02019-201ENST00000608605 2060 ntBASIC4.49□□□□□ -1.69
HLA-DRB4X5D2U9 SNW1-204ENST00000554775 1687 ntTSL 5 BASIC4.49□□□□□ -1.69
HLA-DRB4X5D2U9 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
HLA-DRB4X5D2U9 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC4.49□□□□□ -1.69
HLA-DRB4X5D2U9 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC4.49□□□□□ -1.69
HLA-DRB4X5D2U9 OR10R3P-201ENST00000361688 942 ntBASIC4.49□□□□□ -1.69
HLA-DRB4X5D2U9 IFNB1-201ENST00000380232 859 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
HLA-DRB4X5D2U9 AC117402.1-202ENST00000383686 820 ntTSL 2 BASIC4.49□□□□□ -1.69
HLA-DRB4X5D2U9 TOMM6-202ENST00000398884 637 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
HLA-DRB4X5D2U9 AL096829.1-201ENST00000413677 457 ntBASIC4.49□□□□□ -1.69
HLA-DRB4X5D2U9 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC4.49□□□□□ -1.69
HLA-DRB4X5D2U9 HMGN2P27-201ENST00000427352 270 ntBASIC4.49□□□□□ -1.69
HLA-DRB4X5D2U9 AL160004.1-201ENST00000434311 478 ntTSL 3 BASIC4.49□□□□□ -1.69
HLA-DRB4X5D2U9 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
HLA-DRB4X5D2U9 AC099670.2-201ENST00000435130 321 ntBASIC4.49□□□□□ -1.69
HLA-DRB4X5D2U9 AL353751.1-203ENST00000437032 603 ntTSL 3 BASIC4.49□□□□□ -1.69
HLA-DRB4X5D2U9 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC4.49□□□□□ -1.69
HLA-DRB4X5D2U9 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC4.49□□□□□ -1.69
HLA-DRB4X5D2U9 CYCSP51-201ENST00000443545 318 ntBASIC4.49□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 92.8 ms