Protein–RNA interactions for Protein: Q9Y5X1

SNX9, Sorting nexin-9, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9Q9Y5X1 AL096712.1-201ENST00000614561 159 ntBASIC6.43□□□□□ -1.38
SNX9Q9Y5X1 AP001153.1-201ENST00000641024 338 ntBASIC6.43□□□□□ -1.38
SNX9Q9Y5X1 MFSD8-201ENST00000296468 4516 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
SNX9Q9Y5X1 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC6.43□□□□□ -1.38
SNX9Q9Y5X1 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
SNX9Q9Y5X1 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
SNX9Q9Y5X1 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC6.43□□□□□ -1.38
SNX9Q9Y5X1 ZNF311-203ENST00000377179 2730 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
SNX9Q9Y5X1 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
SNX9Q9Y5X1 CREM-203ENST00000344351 1625 ntTSL 2 BASIC6.43□□□□□ -1.38
SNX9Q9Y5X1 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
SNX9Q9Y5X1 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
SNX9Q9Y5X1 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC6.43□□□□□ -1.38
SNX9Q9Y5X1 AC005225.5-201ENST00000623547 2225 ntBASIC6.42□□□□□ -1.38
SNX9Q9Y5X1 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC6.42□□□□□ -1.38
SNX9Q9Y5X1 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC6.42□□□□□ -1.38
SNX9Q9Y5X1 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC6.42□□□□□ -1.38
SNX9Q9Y5X1 ZEB2-244ENST00000638007 9140 ntTSL 5 BASIC6.42□□□□□ -1.38
SNX9Q9Y5X1 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC6.42□□□□□ -1.38
SNX9Q9Y5X1 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC6.42□□□□□ -1.38
SNX9Q9Y5X1 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
SNX9Q9Y5X1 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
SNX9Q9Y5X1 TAF13-201ENST00000338366 813 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
SNX9Q9Y5X1 IFNB1-201ENST00000380232 859 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
SNX9Q9Y5X1 AL360271.1-201ENST00000395679 510 ntBASIC6.42□□□□□ -1.38
SNX9Q9Y5X1 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC6.42□□□□□ -1.38
SNX9Q9Y5X1 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC6.42□□□□□ -1.38
SNX9Q9Y5X1 AC012668.2-201ENST00000431727 503 ntTSL 3 BASIC6.42□□□□□ -1.38
SNX9Q9Y5X1 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC6.42□□□□□ -1.38
SNX9Q9Y5X1 ACA64.1-201ENST00000459171 127 ntBASIC6.42□□□□□ -1.38
SNX9Q9Y5X1 AC104164.1-201ENST00000460282 590 ntBASIC6.42□□□□□ -1.38
SNX9Q9Y5X1 AC023245.1-201ENST00000468501 517 ntBASIC6.42□□□□□ -1.38
SNX9Q9Y5X1 AC090589.1-201ENST00000473109 362 ntBASIC6.42□□□□□ -1.38
SNX9Q9Y5X1 AC008629.2-201ENST00000503783 483 ntBASIC6.42□□□□□ -1.38
SNX9Q9Y5X1 AC114781.3-201ENST00000512083 142 ntBASIC6.42□□□□□ -1.38
SNX9Q9Y5X1 CYP4F27P-201ENST00000514557 494 ntBASIC6.42□□□□□ -1.38
SNX9Q9Y5X1 SETP21-201ENST00000514799 892 ntBASIC6.42□□□□□ -1.38
SNX9Q9Y5X1 WBP1LP3-201ENST00000523033 208 ntBASIC6.42□□□□□ -1.38
SNX9Q9Y5X1 AP005436.1-201ENST00000531454 488 ntTSL 2 BASIC6.42□□□□□ -1.38
SNX9Q9Y5X1 NANOGNBP2-201ENST00000544753 553 ntBASIC6.42□□□□□ -1.38
SNX9Q9Y5X1 AC012555.2-201ENST00000549448 413 ntTSL 3 BASIC6.42□□□□□ -1.38
SNX9Q9Y5X1 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC6.42□□□□□ -1.38
SNX9Q9Y5X1 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC6.42□□□□□ -1.38
SNX9Q9Y5X1 AC090518.1-202ENST00000568246 578 ntTSL 4 BASIC6.42□□□□□ -1.38
SNX9Q9Y5X1 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC6.42□□□□□ -1.38
SNX9Q9Y5X1 MIR132-201ENST00000591554 101 ntBASIC6.42□□□□□ -1.38
SNX9Q9Y5X1 AC004890.3-201ENST00000605566 1095 ntBASIC6.42□□□□□ -1.38
SNX9Q9Y5X1 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC6.42□□□□□ -1.38
SNX9Q9Y5X1 RBMS3-AS2-206ENST00000629296 438 ntTSL 5 BASIC6.42□□□□□ -1.38
SNX9Q9Y5X1 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
SNX9Q9Y5X1 TLR10-208ENST00000622002 3673 ntAPPRIS P1 TSL 3 BASIC6.42□□□□□ -1.38
SNX9Q9Y5X1 NXF3-201ENST00000395065 1938 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
SNX9Q9Y5X1 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC6.42□□□□□ -1.38
SNX9Q9Y5X1 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC6.42□□□□□ -1.38
SNX9Q9Y5X1 ABCB11-201ENST00000263817 4775 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
SNX9Q9Y5X1 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC6.42□□□□□ -1.38
SNX9Q9Y5X1 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
SNX9Q9Y5X1 AC068769.1-201ENST00000474767 2426 ntBASIC6.41□□□□□ -1.38
SNX9Q9Y5X1 CYLD-201ENST00000311559 5371 ntTSL 5 BASIC6.41□□□□□ -1.38
SNX9Q9Y5X1 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC6.41□□□□□ -1.38
SNX9Q9Y5X1 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC6.41□□□□□ -1.38
SNX9Q9Y5X1 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
SNX9Q9Y5X1 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
SNX9Q9Y5X1 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC6.41□□□□□ -1.38
SNX9Q9Y5X1 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC6.41□□□□□ -1.38
SNX9Q9Y5X1 CACNA1E-204ENST00000367567 14757 ntAPPRIS ALT2 TSL 5 BASIC6.41□□□□□ -1.38
SNX9Q9Y5X1 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
SNX9Q9Y5X1 HYAL4-202ENST00000476325 1616 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
SNX9Q9Y5X1 OR2G3-201ENST00000320002 930 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
SNX9Q9Y5X1 OR7E25P-201ENST00000344844 931 ntBASIC6.41□□□□□ -1.38
SNX9Q9Y5X1 CLEC12A-202ENST00000350667 699 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
SNX9Q9Y5X1 OR6C65-201ENST00000379665 1076 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
SNX9Q9Y5X1 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC6.41□□□□□ -1.38
SNX9Q9Y5X1 LYPLA1P3-201ENST00000402650 695 ntBASIC6.41□□□□□ -1.38
SNX9Q9Y5X1 RN7SKP166-201ENST00000410812 305 ntBASIC6.41□□□□□ -1.38
SNX9Q9Y5X1 LINC00446-201ENST00000414743 459 ntTSL 5 BASIC6.41□□□□□ -1.38
SNX9Q9Y5X1 C14orf105-202ENST00000422976 1153 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
SNX9Q9Y5X1 OR5W1P-201ENST00000423705 938 ntBASIC6.41□□□□□ -1.38
SNX9Q9Y5X1 AC016027.5-201ENST00000427227 210 ntBASIC6.41□□□□□ -1.38
SNX9Q9Y5X1 UBE2V2P3-201ENST00000433562 437 ntBASIC6.41□□□□□ -1.38
SNX9Q9Y5X1 NDUFS5P5-201ENST00000437256 321 ntBASIC6.41□□□□□ -1.38
SNX9Q9Y5X1 VN1R110P-201ENST00000438988 971 ntBASIC6.41□□□□□ -1.38
SNX9Q9Y5X1 AC108488.1-202ENST00000439547 482 ntTSL 3 BASIC6.41□□□□□ -1.38
SNX9Q9Y5X1 BMS1P10-201ENST00000443754 1120 ntBASIC6.41□□□□□ -1.38
SNX9Q9Y5X1 AC117386.1-201ENST00000474444 606 ntTSL 4 BASIC6.41□□□□□ -1.38
SNX9Q9Y5X1 AC008945.1-201ENST00000505144 499 ntBASIC6.41□□□□□ -1.38
SNX9Q9Y5X1 AC097110.1-201ENST00000507344 768 ntTSL 2 BASIC6.41□□□□□ -1.38
SNX9Q9Y5X1 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC6.41□□□□□ -1.38
SNX9Q9Y5X1 SPINK9-202ENST00000511717 604 ntAPPRIS ALT2 TSL 5 BASIC6.41□□□□□ -1.38
SNX9Q9Y5X1 RNU6-362P-201ENST00000516736 90 ntBASIC6.41□□□□□ -1.38
SNX9Q9Y5X1 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC6.41□□□□□ -1.38
SNX9Q9Y5X1 AP000619.2-201ENST00000546014 969 ntBASIC6.41□□□□□ -1.38
SNX9Q9Y5X1 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
SNX9Q9Y5X1 LINC01572-205ENST00000570152 360 ntTSL 3 BASIC6.41□□□□□ -1.38
SNX9Q9Y5X1 MIR3908-201ENST00000579798 126 ntBASIC6.41□□□□□ -1.38
SNX9Q9Y5X1 MIR4776-2-201ENST00000580204 80 ntBASIC6.41□□□□□ -1.38
SNX9Q9Y5X1 AC015982.1-201ENST00000608113 465 ntBASIC6.41□□□□□ -1.38
SNX9Q9Y5X1 AC129915.3-201ENST00000634128 948 ntBASIC6.41□□□□□ -1.38
SNX9Q9Y5X1 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
SNX9Q9Y5X1 OR2AT4-204ENST00000641593 8733 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 184.6 ms