Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC4.96□□□□□ -1.61
KCNIP3Q9Y2W7 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.96□□□□□ -1.61
KCNIP3Q9Y2W7 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC4.96□□□□□ -1.61
KCNIP3Q9Y2W7 ZNF675-201ENST00000359788 2301 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.61
KCNIP3Q9Y2W7 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC4.96□□□□□ -1.62
KCNIP3Q9Y2W7 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
KCNIP3Q9Y2W7 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC4.96□□□□□ -1.62
KCNIP3Q9Y2W7 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC4.96□□□□□ -1.62
KCNIP3Q9Y2W7 OFD1P15Y-201ENST00000411536 1392 ntBASIC4.96□□□□□ -1.62
KCNIP3Q9Y2W7 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC4.96□□□□□ -1.62
KCNIP3Q9Y2W7 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
KCNIP3Q9Y2W7 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
KCNIP3Q9Y2W7 AC087752.1-201ENST00000391360 558 ntBASIC4.96□□□□□ -1.62
KCNIP3Q9Y2W7 AC026310.1-201ENST00000396004 378 ntBASIC4.96□□□□□ -1.62
KCNIP3Q9Y2W7 AC003087.1-201ENST00000412828 499 ntTSL 3 BASIC4.96□□□□□ -1.62
KCNIP3Q9Y2W7 MTND4LP21-201ENST00000415303 295 ntBASIC4.96□□□□□ -1.62
KCNIP3Q9Y2W7 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC4.96□□□□□ -1.62
KCNIP3Q9Y2W7 AC074035.1-201ENST00000420725 1184 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
KCNIP3Q9Y2W7 CDC42P6-201ENST00000421246 576 ntBASIC4.96□□□□□ -1.62
KCNIP3Q9Y2W7 RPS7P14-201ENST00000426405 583 ntBASIC4.96□□□□□ -1.62
KCNIP3Q9Y2W7 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC4.96□□□□□ -1.62
KCNIP3Q9Y2W7 CCNB1IP1P1-201ENST00000428976 839 ntBASIC4.96□□□□□ -1.62
KCNIP3Q9Y2W7 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC4.96□□□□□ -1.62
KCNIP3Q9Y2W7 NPM1P18-201ENST00000434232 732 ntBASIC4.96□□□□□ -1.62
KCNIP3Q9Y2W7 AC099670.2-201ENST00000435130 321 ntBASIC4.96□□□□□ -1.62
KCNIP3Q9Y2W7 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
KCNIP3Q9Y2W7 AL139135.2-201ENST00000445040 433 ntBASIC4.96□□□□□ -1.62
KCNIP3Q9Y2W7 AL355483.3-201ENST00000446686 752 ntTSL 3 BASIC4.96□□□□□ -1.62
KCNIP3Q9Y2W7 FRG2FP-204ENST00000453982 852 ntBASIC4.96□□□□□ -1.62
KCNIP3Q9Y2W7 AL603882.1-201ENST00000463059 681 ntBASIC4.96□□□□□ -1.62
KCNIP3Q9Y2W7 MRPS33-203ENST00000467334 622 ntTSL 2 BASIC4.96□□□□□ -1.62
KCNIP3Q9Y2W7 RN7SL70P-201ENST00000478322 302 ntBASIC4.96□□□□□ -1.62
KCNIP3Q9Y2W7 RPL12P31-201ENST00000478433 450 ntBASIC4.96□□□□□ -1.62
KCNIP3Q9Y2W7 RN7SL413P-201ENST00000482700 297 ntBASIC4.96□□□□□ -1.62
KCNIP3Q9Y2W7 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC4.96□□□□□ -1.62
KCNIP3Q9Y2W7 AC114956.3-202ENST00000505645 482 ntTSL 5 BASIC4.96□□□□□ -1.62
KCNIP3Q9Y2W7 AC010409.2-201ENST00000505780 478 ntBASIC4.96□□□□□ -1.62
KCNIP3Q9Y2W7 LINC02503-201ENST00000510505 812 ntTSL 2 BASIC4.96□□□□□ -1.62
KCNIP3Q9Y2W7 CFI-204ENST00000510800 667 ntTSL 2 BASIC4.96□□□□□ -1.62
KCNIP3Q9Y2W7 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC4.96□□□□□ -1.62
KCNIP3Q9Y2W7 AP000426.1-201ENST00000518749 361 ntTSL 3 BASIC4.96□□□□□ -1.62
KCNIP3Q9Y2W7 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
KCNIP3Q9Y2W7 AC008601.1-201ENST00000519892 527 ntTSL 4 BASIC4.96□□□□□ -1.62
KCNIP3Q9Y2W7 AC023866.2-201ENST00000521378 387 ntTSL 3 BASIC4.96□□□□□ -1.62
KCNIP3Q9Y2W7 AC022616.2-201ENST00000523185 300 ntBASIC4.96□□□□□ -1.62
KCNIP3Q9Y2W7 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC4.96□□□□□ -1.62
KCNIP3Q9Y2W7 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC4.96□□□□□ -1.62
KCNIP3Q9Y2W7 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC4.96□□□□□ -1.62
KCNIP3Q9Y2W7 SETP1-201ENST00000556014 845 ntBASIC4.96□□□□□ -1.62
KCNIP3Q9Y2W7 AC025430.1-201ENST00000561324 498 ntTSL 3 BASIC4.96□□□□□ -1.62
KCNIP3Q9Y2W7 AC006305.2-201ENST00000589617 552 ntTSL 4 BASIC4.96□□□□□ -1.62
KCNIP3Q9Y2W7 COX6CP7-201ENST00000597056 208 ntBASIC4.96□□□□□ -1.62
KCNIP3Q9Y2W7 AC004921.1-201ENST00000608884 733 ntTSL 5 BASIC4.96□□□□□ -1.62
KCNIP3Q9Y2W7 GAPDHP41-201ENST00000613707 975 ntBASIC4.96□□□□□ -1.62
KCNIP3Q9Y2W7 AL139407.1-201ENST00000613826 1175 ntBASIC4.96□□□□□ -1.62
KCNIP3Q9Y2W7 CKLF-CMTM1-206ENST00000616804 678 ntAPPRIS ALT2 TSL 2 BASIC4.96□□□□□ -1.62
KCNIP3Q9Y2W7 BRCC3-209ENST00000620502 882 ntAPPRIS ALT2 TSL 5 BASIC4.96□□□□□ -1.62
KCNIP3Q9Y2W7 Z83818.2-201ENST00000635331 433 ntTSL 3 BASIC4.96□□□□□ -1.62
KCNIP3Q9Y2W7 AL049767.1-201ENST00000636811 514 ntTSL 5 BASIC4.96□□□□□ -1.62
KCNIP3Q9Y2W7 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
KCNIP3Q9Y2W7 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC4.96□□□□□ -1.62
KCNIP3Q9Y2W7 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.62
KCNIP3Q9Y2W7 AC083899.1-201ENST00000454465 3819 ntBASIC4.96□□□□□ -1.62
KCNIP3Q9Y2W7 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
KCNIP3Q9Y2W7 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
KCNIP3Q9Y2W7 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
KCNIP3Q9Y2W7 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
KCNIP3Q9Y2W7 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC4.96□□□□□ -1.62
KCNIP3Q9Y2W7 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC4.96□□□□□ -1.62
KCNIP3Q9Y2W7 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
KCNIP3Q9Y2W7 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
KCNIP3Q9Y2W7 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC4.95□□□□□ -1.62
KCNIP3Q9Y2W7 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
KCNIP3Q9Y2W7 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC4.95□□□□□ -1.62
KCNIP3Q9Y2W7 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
KCNIP3Q9Y2W7 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
KCNIP3Q9Y2W7 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
KCNIP3Q9Y2W7 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC4.95□□□□□ -1.62
KCNIP3Q9Y2W7 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC4.95□□□□□ -1.62
KCNIP3Q9Y2W7 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
KCNIP3Q9Y2W7 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
KCNIP3Q9Y2W7 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC4.95□□□□□ -1.62
KCNIP3Q9Y2W7 CROT-204ENST00000442291 1993 ntTSL 5 BASIC4.95□□□□□ -1.62
KCNIP3Q9Y2W7 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
KCNIP3Q9Y2W7 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
KCNIP3Q9Y2W7 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
KCNIP3Q9Y2W7 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
KCNIP3Q9Y2W7 RNA5SP429-201ENST00000363688 109 ntBASIC4.95□□□□□ -1.62
KCNIP3Q9Y2W7 OR10R2-201ENST00000368152 1008 ntAPPRIS P2 BASIC4.95□□□□□ -1.62
KCNIP3Q9Y2W7 TOMM6-202ENST00000398884 637 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
KCNIP3Q9Y2W7 MIR1231-201ENST00000408101 92 ntBASIC4.95□□□□□ -1.62
KCNIP3Q9Y2W7 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC4.95□□□□□ -1.62
KCNIP3Q9Y2W7 RPS7P8-201ENST00000418311 581 ntBASIC4.95□□□□□ -1.62
KCNIP3Q9Y2W7 RPS15AP30-201ENST00000420976 390 ntBASIC4.95□□□□□ -1.62
KCNIP3Q9Y2W7 AL672212.1-201ENST00000422246 400 ntBASIC4.95□□□□□ -1.62
KCNIP3Q9Y2W7 E2F6P1-201ENST00000428850 745 ntBASIC4.95□□□□□ -1.62
KCNIP3Q9Y2W7 CENPN-204ENST00000428963 971 ntTSL 2 BASIC4.95□□□□□ -1.62
KCNIP3Q9Y2W7 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC4.95□□□□□ -1.62
KCNIP3Q9Y2W7 AC096632.2-201ENST00000438139 1239 ntBASIC4.95□□□□□ -1.62
KCNIP3Q9Y2W7 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC4.95□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 82 ms