Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 HNRNPA1P18-201ENST00000433537 927 ntBASIC7.06□□□□□ -1.28
CLIP2Q9UDT6 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC7.06□□□□□ -1.28
CLIP2Q9UDT6 C1orf140-201ENST00000434398 645 ntTSL 3 BASIC7.06□□□□□ -1.28
CLIP2Q9UDT6 PCBP2P1-201ENST00000437262 977 ntBASIC7.06□□□□□ -1.28
CLIP2Q9UDT6 AL390879.1-201ENST00000439143 386 ntBASIC7.06□□□□□ -1.28
CLIP2Q9UDT6 AL512605.1-202ENST00000441919 381 ntBASIC7.06□□□□□ -1.28
CLIP2Q9UDT6 CASP5-205ENST00000444749 1237 ntAPPRIS P1 TSL 2 BASIC7.06□□□□□ -1.28
CLIP2Q9UDT6 AL359955.2-201ENST00000445380 353 ntBASIC7.06□□□□□ -1.28
CLIP2Q9UDT6 AC004870.2-201ENST00000445615 831 ntTSL 3 BASIC7.06□□□□□ -1.28
CLIP2Q9UDT6 RPL23AP60-201ENST00000450011 454 ntBASIC7.06□□□□□ -1.28
CLIP2Q9UDT6 AC117386.1-201ENST00000474444 606 ntTSL 4 BASIC7.06□□□□□ -1.28
CLIP2Q9UDT6 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC7.06□□□□□ -1.28
CLIP2Q9UDT6 LINC02218-202ENST00000504998 582 ntTSL 4 BASIC7.06□□□□□ -1.28
CLIP2Q9UDT6 SETP21-201ENST00000514799 892 ntBASIC7.06□□□□□ -1.28
CLIP2Q9UDT6 SNORD46.2-201ENST00000516021 102 ntBASIC7.06□□□□□ -1.28
CLIP2Q9UDT6 AC022826.1-201ENST00000519383 805 ntBASIC7.06□□□□□ -1.28
CLIP2Q9UDT6 AC110056.1-201ENST00000525759 911 ntBASIC7.06□□□□□ -1.28
CLIP2Q9UDT6 CASP5-209ENST00000531367 879 ntTSL 5 BASIC7.06□□□□□ -1.28
CLIP2Q9UDT6 AC025419.1-207ENST00000546198 1072 ntTSL 3 BASIC7.06□□□□□ -1.28
CLIP2Q9UDT6 OTX2-203ENST00000554559 715 ntTSL 5 BASIC7.06□□□□□ -1.28
CLIP2Q9UDT6 AC009145.2-201ENST00000562685 377 ntTSL 3 BASIC7.06□□□□□ -1.28
CLIP2Q9UDT6 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC7.06□□□□□ -1.28
CLIP2Q9UDT6 MIR4776-2-201ENST00000580204 80 ntBASIC7.06□□□□□ -1.28
CLIP2Q9UDT6 AL157938.2-202ENST00000588378 875 ntTSL 5 BASIC7.06□□□□□ -1.28
CLIP2Q9UDT6 AC073218.2-202ENST00000605962 617 ntTSL 5 BASIC7.06□□□□□ -1.28
CLIP2Q9UDT6 AL357060.1-201ENST00000638039 977 ntTSL 5 BASIC7.06□□□□□ -1.28
CLIP2Q9UDT6 AC008691.1-209ENST00000642094 814 ntBASIC7.06□□□□□ -1.28
CLIP2Q9UDT6 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC7.06□□□□□ -1.28
CLIP2Q9UDT6 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC7.06□□□□□ -1.28
CLIP2Q9UDT6 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
CLIP2Q9UDT6 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC7.06□□□□□ -1.28
CLIP2Q9UDT6 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
CLIP2Q9UDT6 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC7.06□□□□□ -1.28
CLIP2Q9UDT6 C3orf35-203ENST00000425564 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC7.06□□□□□ -1.28
CLIP2Q9UDT6 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
CLIP2Q9UDT6 AC012254.3-201ENST00000591183 2117 ntBASIC7.06□□□□□ -1.28
CLIP2Q9UDT6 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
CLIP2Q9UDT6 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
CLIP2Q9UDT6 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC7.05□□□□□ -1.28
CLIP2Q9UDT6 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
CLIP2Q9UDT6 SLC38A1-211ENST00000612161 1607 ntTSL 5 BASIC7.05□□□□□ -1.28
CLIP2Q9UDT6 AC005261.2-201ENST00000593427 4258 ntBASIC7.05□□□□□ -1.28
CLIP2Q9UDT6 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
CLIP2Q9UDT6 LRRC49-204ENST00000544974 6605 ntTSL 2 BASIC7.05□□□□□ -1.28
CLIP2Q9UDT6 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
CLIP2Q9UDT6 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
CLIP2Q9UDT6 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
CLIP2Q9UDT6 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC7.05□□□□□ -1.28
CLIP2Q9UDT6 OR10R3P-201ENST00000361688 942 ntBASIC7.05□□□□□ -1.28
CLIP2Q9UDT6 RN7SKP78-201ENST00000364711 318 ntBASIC7.05□□□□□ -1.28
CLIP2Q9UDT6 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC7.05□□□□□ -1.28
CLIP2Q9UDT6 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC7.05□□□□□ -1.28
CLIP2Q9UDT6 TRGV5P-201ENST00000419915 354 ntBASIC7.05□□□□□ -1.28
CLIP2Q9UDT6 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC7.05□□□□□ -1.28
CLIP2Q9UDT6 NAP1L4P2-201ENST00000425958 899 ntBASIC7.05□□□□□ -1.28
CLIP2Q9UDT6 TUBB4BP6-201ENST00000437576 479 ntBASIC7.05□□□□□ -1.28
CLIP2Q9UDT6 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC7.05□□□□□ -1.28
CLIP2Q9UDT6 LINC01952-202ENST00000450016 281 ntTSL 3 BASIC7.05□□□□□ -1.28
CLIP2Q9UDT6 AC008080.2-201ENST00000455149 577 ntTSL 4 BASIC7.05□□□□□ -1.28
CLIP2Q9UDT6 RPL7L1P3-201ENST00000455249 689 ntBASIC7.05□□□□□ -1.28
CLIP2Q9UDT6 AC011476.1-201ENST00000466725 307 ntBASIC7.05□□□□□ -1.28
CLIP2Q9UDT6 NDUFB2-210ENST00000475276 539 ntTSL 4 BASIC7.05□□□□□ -1.28
CLIP2Q9UDT6 C5orf64-203ENST00000505642 2970 ntTSL 2 BASIC7.05□□□□□ -1.28
CLIP2Q9UDT6 IGLVIV-64-201ENST00000518581 301 ntBASIC7.05□□□□□ -1.28
CLIP2Q9UDT6 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
CLIP2Q9UDT6 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
CLIP2Q9UDT6 AP003059.1-201ENST00000526206 432 ntTSL 5 BASIC7.05□□□□□ -1.28
CLIP2Q9UDT6 OR9A4-201ENST00000548136 1093 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
CLIP2Q9UDT6 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC7.05□□□□□ -1.28
CLIP2Q9UDT6 LINC00929-203ENST00000556213 713 ntTSL 2 BASIC7.05□□□□□ -1.28
CLIP2Q9UDT6 AC040918.1-201ENST00000560056 632 ntTSL 2 BASIC7.05□□□□□ -1.28
CLIP2Q9UDT6 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC7.05□□□□□ -1.28
CLIP2Q9UDT6 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC7.05□□□□□ -1.28
CLIP2Q9UDT6 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC7.05□□□□□ -1.28
CLIP2Q9UDT6 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC7.05□□□□□ -1.28
CLIP2Q9UDT6 AP001267.4-201ENST00000602598 545 ntBASIC7.05□□□□□ -1.28
CLIP2Q9UDT6 LINC01320-205ENST00000604250 857 ntTSL 5 BASIC7.05□□□□□ -1.28
CLIP2Q9UDT6 AL021918.2-201ENST00000613415 194 ntBASIC7.05□□□□□ -1.28
CLIP2Q9UDT6 AL512356.3-201ENST00000623005 461 ntBASIC7.05□□□□□ -1.28
CLIP2Q9UDT6 AP001153.1-201ENST00000641024 338 ntBASIC7.05□□□□□ -1.28
CLIP2Q9UDT6 OR8S1-202ENST00000641651 939 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
CLIP2Q9UDT6 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
CLIP2Q9UDT6 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
CLIP2Q9UDT6 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
CLIP2Q9UDT6 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
CLIP2Q9UDT6 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
CLIP2Q9UDT6 GLRA2-204ENST00000443437 3182 ntTSL 2 BASIC7.05□□□□□ -1.28
CLIP2Q9UDT6 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
CLIP2Q9UDT6 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
CLIP2Q9UDT6 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC7.05□□□□□ -1.28
CLIP2Q9UDT6 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC7.04□□□□□ -1.28
CLIP2Q9UDT6 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC7.04□□□□□ -1.28
CLIP2Q9UDT6 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
CLIP2Q9UDT6 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC7.04□□□□□ -1.28
CLIP2Q9UDT6 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
CLIP2Q9UDT6 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
CLIP2Q9UDT6 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC7.04□□□□□ -1.28
CLIP2Q9UDT6 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
CLIP2Q9UDT6 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC7.04□□□□□ -1.28
CLIP2Q9UDT6 C14orf105-201ENST00000216445 3082 ntAPPRIS P3 TSL 1 (best) BASIC7.04□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 88.5 ms