Protein–RNA interactions for Protein: Q9UBP4

DKK3, Dickkopf-related protein 3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DKK3Q9UBP4 CASC8-203ENST00000502082 1420 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
DKK3Q9UBP4 AP004243.1-201ENST00000529108 1433 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
DKK3Q9UBP4 AC026523.2-201ENST00000625039 7739 ntBASIC6.42□□□□□ -1.38
DKK3Q9UBP4 SMAD5-211ENST00000545279 7012 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
DKK3Q9UBP4 RACGAP1-203ENST00000454520 3080 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
DKK3Q9UBP4 AC125793.1-201ENST00000565238 1493 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
DKK3Q9UBP4 NBPF12-205ENST00000617614 4630 ntTSL 5 BASIC6.42□□□□□ -1.38
DKK3Q9UBP4 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC6.42□□□□□ -1.38
DKK3Q9UBP4 MIPOL1-201ENST00000327441 7185 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
DKK3Q9UBP4 CHEK1-216ENST00000534070 3513 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
DKK3Q9UBP4 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
DKK3Q9UBP4 GPR174-201ENST00000276077 1258 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
DKK3Q9UBP4 ODF3-202ENST00000342593 386 ntTSL 5 BASIC6.42□□□□□ -1.38
DKK3Q9UBP4 POU1F1-201ENST00000344265 1149 ntTSL 5 BASIC6.42□□□□□ -1.38
DKK3Q9UBP4 MYL12B-202ENST00000400175 1025 ntAPPRIS P1 TSL 3 BASIC6.42□□□□□ -1.38
DKK3Q9UBP4 ATP5F1P6-201ENST00000402768 767 ntBASIC6.42□□□□□ -1.38
DKK3Q9UBP4 AC019205.1-201ENST00000421830 730 ntBASIC6.42□□□□□ -1.38
DKK3Q9UBP4 MTCO2P17-201ENST00000424336 677 ntBASIC6.42□□□□□ -1.38
DKK3Q9UBP4 NAP1L4P2-201ENST00000425958 899 ntBASIC6.42□□□□□ -1.38
DKK3Q9UBP4 AC017019.1-201ENST00000426129 261 ntBASIC6.42□□□□□ -1.38
DKK3Q9UBP4 AL133465.1-201ENST00000432942 512 ntTSL 3 BASIC6.42□□□□□ -1.38
DKK3Q9UBP4 AL358074.1-201ENST00000444800 509 ntTSL 2 BASIC6.42□□□□□ -1.38
DKK3Q9UBP4 AC093166.3-201ENST00000448785 303 ntBASIC6.42□□□□□ -1.38
DKK3Q9UBP4 OFD1P3Y-201ENST00000453312 783 ntBASIC6.42□□□□□ -1.38
DKK3Q9UBP4 AL031275.1-201ENST00000457405 418 ntTSL 3 BASIC6.42□□□□□ -1.38
DKK3Q9UBP4 AC108751.3-201ENST00000461814 1020 ntBASIC6.42□□□□□ -1.38
DKK3Q9UBP4 OR7E22P-201ENST00000478335 1035 ntBASIC6.42□□□□□ -1.38
DKK3Q9UBP4 AC106864.2-201ENST00000505632 740 ntTSL 2 BASIC6.42□□□□□ -1.38
DKK3Q9UBP4 C5orf64-204ENST00000507461 535 ntTSL 4 BASIC6.42□□□□□ -1.38
DKK3Q9UBP4 UGT2A3P7-201ENST00000510485 734 ntBASIC6.42□□□□□ -1.38
DKK3Q9UBP4 MAST4-IT1-201ENST00000514241 658 ntBASIC6.42□□□□□ -1.38
DKK3Q9UBP4 Vault.2-201ENST00000516519 98 ntBASIC6.42□□□□□ -1.38
DKK3Q9UBP4 LACTB2-AS1-203ENST00000518553 817 ntTSL 5 BASIC6.42□□□□□ -1.38
DKK3Q9UBP4 AC027117.1-201ENST00000520646 667 ntTSL 5 BASIC6.42□□□□□ -1.38
DKK3Q9UBP4 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
DKK3Q9UBP4 AC009729.1-201ENST00000548873 1133 ntBASIC6.42□□□□□ -1.38
DKK3Q9UBP4 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC6.42□□□□□ -1.38
DKK3Q9UBP4 MIR3154-201ENST00000577829 84 ntBASIC6.42□□□□□ -1.38
DKK3Q9UBP4 NPM1P45-201ENST00000583151 559 ntBASIC6.42□□□□□ -1.38
DKK3Q9UBP4 AL353811.1-202ENST00000602614 618 ntTSL 3 BASIC6.42□□□□□ -1.38
DKK3Q9UBP4 SMIM12P1-201ENST00000603004 274 ntBASIC6.42□□□□□ -1.38
DKK3Q9UBP4 AC135983.2-201ENST00000604301 628 ntTSL 5 BASIC6.42□□□□□ -1.38
DKK3Q9UBP4 SMAGP-208ENST00000605627 577 ntTSL 5 BASIC6.42□□□□□ -1.38
DKK3Q9UBP4 AL662797.2-201ENST00000607333 527 ntTSL 2 BASIC6.42□□□□□ -1.38
DKK3Q9UBP4 AL135999.3-201ENST00000610501 812 ntBASIC6.42□□□□□ -1.38
DKK3Q9UBP4 Metazoa_SRP.38-201ENST00000615981 254 ntBASIC6.42□□□□□ -1.38
DKK3Q9UBP4 MIR6071-201ENST00000616741 78 ntBASIC6.42□□□□□ -1.38
DKK3Q9UBP4 AL390964.1-201ENST00000622486 845 ntTSL 3 BASIC6.42□□□□□ -1.38
DKK3Q9UBP4 AL138955.1-201ENST00000622881 1040 ntBASIC6.42□□□□□ -1.38
DKK3Q9UBP4 AC097655.1-201ENST00000635075 318 ntBASIC6.42□□□□□ -1.38
DKK3Q9UBP4 OR8G5-202ENST00000641707 1156 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
DKK3Q9UBP4 RFTN2-201ENST00000295049 5827 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
DKK3Q9UBP4 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC6.42□□□□□ -1.38
DKK3Q9UBP4 CDY5P-201ENST00000411487 1580 ntBASIC6.42□□□□□ -1.38
DKK3Q9UBP4 CDY9P-201ENST00000451397 1580 ntBASIC6.42□□□□□ -1.38
DKK3Q9UBP4 KCNJ10-207ENST00000638868 3883 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
DKK3Q9UBP4 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
DKK3Q9UBP4 STON1-202ENST00000406226 5614 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
DKK3Q9UBP4 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC6.42□□□□□ -1.38
DKK3Q9UBP4 IGF2BP3-201ENST00000258729 4250 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
DKK3Q9UBP4 UGT2B27P-201ENST00000505092 1620 ntBASIC6.42□□□□□ -1.38
DKK3Q9UBP4 ZNF329-204ENST00000598312 3410 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
DKK3Q9UBP4 PLEKHA1-205ENST00000433307 3704 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
DKK3Q9UBP4 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC6.42□□□□□ -1.38
DKK3Q9UBP4 MTPAP-201ENST00000263063 5601 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
DKK3Q9UBP4 FOXJ3-204ENST00000372572 5352 ntAPPRIS P3 TSL 1 (best) BASIC6.42□□□□□ -1.38
DKK3Q9UBP4 STK32A-202ENST00000397936 5393 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
DKK3Q9UBP4 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC6.42□□□□□ -1.38
DKK3Q9UBP4 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC6.42□□□□□ -1.38
DKK3Q9UBP4 AC024651.2-201ENST00000562480 2098 ntBASIC6.41□□□□□ -1.38
DKK3Q9UBP4 BABAM2-206ENST00000379632 1752 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
DKK3Q9UBP4 NLRP3P1-201ENST00000622303 1785 ntBASIC6.41□□□□□ -1.38
DKK3Q9UBP4 NR5A2-203ENST00000367362 5086 ntAPPRIS P3 TSL 1 (best) BASIC6.41□□□□□ -1.38
DKK3Q9UBP4 CBLB-205ENST00000407712 1493 ntTSL 2 BASIC6.41□□□□□ -1.38
DKK3Q9UBP4 ANGPT2-201ENST00000325203 5416 ntAPPRIS P3 TSL 1 (best) BASIC6.41□□□□□ -1.38
DKK3Q9UBP4 GOLT1B-201ENST00000229314 3227 ntAPPRIS P2 TSL 1 (best) BASIC6.41□□□□□ -1.38
DKK3Q9UBP4 PHYHIPL-201ENST00000373878 3569 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
DKK3Q9UBP4 ZNF138-206ENST00000440598 2230 ntTSL 2 BASIC6.41□□□□□ -1.38
DKK3Q9UBP4 IFIT1-202ENST00000546318 4613 ntTSL 3 BASIC6.41□□□□□ -1.38
DKK3Q9UBP4 CYLD-207ENST00000564326 3259 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
DKK3Q9UBP4 ZNF253-201ENST00000355650 2268 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
DKK3Q9UBP4 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
DKK3Q9UBP4 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
DKK3Q9UBP4 RNU1-65P-201ENST00000363919 148 ntBASIC6.41□□□□□ -1.38
DKK3Q9UBP4 GCNT6-201ENST00000379591 934 ntBASIC6.41□□□□□ -1.38
DKK3Q9UBP4 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
DKK3Q9UBP4 AL157702.1-201ENST00000398764 426 ntBASIC6.41□□□□□ -1.38
DKK3Q9UBP4 AL358178.1-201ENST00000407698 397 ntBASIC6.41□□□□□ -1.38
DKK3Q9UBP4 AL445213.1-201ENST00000412589 747 ntBASIC6.41□□□□□ -1.38
DKK3Q9UBP4 VNN3-205ENST00000417437 1117 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
DKK3Q9UBP4 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC6.41□□□□□ -1.38
DKK3Q9UBP4 AC073464.3-201ENST00000422564 712 ntBASIC6.41□□□□□ -1.38
DKK3Q9UBP4 AL049594.1-201ENST00000432834 805 ntTSL 3 BASIC6.41□□□□□ -1.38
DKK3Q9UBP4 MTUS2-AS2-202ENST00000434779 720 ntTSL 3 BASIC6.41□□□□□ -1.38
DKK3Q9UBP4 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC6.41□□□□□ -1.38
DKK3Q9UBP4 OR6C72P-201ENST00000451403 892 ntBASIC6.41□□□□□ -1.38
DKK3Q9UBP4 AC007099.1-201ENST00000451622 1185 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
DKK3Q9UBP4 RABGAP1L-214ENST00000478442 648 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
DKK3Q9UBP4 DEFB109A-201ENST00000482450 265 ntBASIC6.41□□□□□ -1.38
DKK3Q9UBP4 RN7SL714P-201ENST00000487050 298 ntBASIC6.41□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 88.4 ms