Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC6.91□□□□□ -1.3
PPARGC1AQ9UBK2 CCDC58P3-201ENST00000590792 430 ntBASIC6.91□□□□□ -1.3
PPARGC1AQ9UBK2 AL161457.2-206ENST00000592778 802 ntTSL 5 BASIC6.91□□□□□ -1.3
PPARGC1AQ9UBK2 AC068790.2-201ENST00000602601 557 ntBASIC6.91□□□□□ -1.3
PPARGC1AQ9UBK2 AC241377.1-201ENST00000619797 406 ntBASIC6.91□□□□□ -1.3
PPARGC1AQ9UBK2 FRYL-202ENST00000358350 11706 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
PPARGC1AQ9UBK2 ZNF329-204ENST00000598312 3410 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
PPARGC1AQ9UBK2 TLR10-201ENST00000308973 3958 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
PPARGC1AQ9UBK2 AC119674.1-202ENST00000641333 1860 ntBASIC6.91□□□□□ -1.3
PPARGC1AQ9UBK2 ZNF227-202ENST00000391961 2993 ntTSL 4 BASIC6.91□□□□□ -1.3
PPARGC1AQ9UBK2 CDH12-208ENST00000522262 3028 ntTSL 2 BASIC6.91□□□□□ -1.3
PPARGC1AQ9UBK2 OR52N1-202ENST00000641645 2545 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
PPARGC1AQ9UBK2 AC113146.2-201ENST00000560743 1961 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
PPARGC1AQ9UBK2 AC062029.1-202ENST00000606164 3651 ntBASIC6.91□□□□□ -1.3
PPARGC1AQ9UBK2 MEPE-203ENST00000424957 2022 ntAPPRIS P3 TSL 2 BASIC6.91□□□□□ -1.3
PPARGC1AQ9UBK2 AC011815.2-201ENST00000618230 2021 ntBASIC6.91□□□□□ -1.3
PPARGC1AQ9UBK2 APOL4-203ENST00000352371 3227 ntAPPRIS P4 TSL 1 (best) BASIC6.91□□□□□ -1.3
PPARGC1AQ9UBK2 AL391261.1-201ENST00000555712 1479 ntBASIC6.91□□□□□ -1.3
PPARGC1AQ9UBK2 TCF12-213ENST00000559703 1544 ntTSL 5 BASIC6.91□□□□□ -1.3
PPARGC1AQ9UBK2 MCFD2-206ENST00000409800 3955 ntTSL 4 BASIC6.91□□□□□ -1.3
PPARGC1AQ9UBK2 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
PPARGC1AQ9UBK2 LGI1-219ENST00000636155 1618 ntTSL 5 BASIC6.9□□□□□ -1.3
PPARGC1AQ9UBK2 AL139384.2-201ENST00000613809 3590 ntBASIC6.9□□□□□ -1.3
PPARGC1AQ9UBK2 PARD3B-213ENST00000614500 7538 ntTSL 5 BASIC6.9□□□□□ -1.3
PPARGC1AQ9UBK2 SOX5-205ENST00000451604 4261 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
PPARGC1AQ9UBK2 PRKAR1A-204ENST00000536854 3697 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
PPARGC1AQ9UBK2 RFTN2-201ENST00000295049 5827 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
PPARGC1AQ9UBK2 ACPP-201ENST00000336375 3125 ntAPPRIS P3 TSL 1 (best) BASIC6.9□□□□□ -1.3
PPARGC1AQ9UBK2 TMEM161B-211ENST00000512429 1796 ntTSL 2 BASIC6.9□□□□□ -1.3
PPARGC1AQ9UBK2 CSNK1G1-202ENST00000561349 1756 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
PPARGC1AQ9UBK2 SORCS1-209ENST00000612154 6862 ntTSL 5 BASIC6.9□□□□□ -1.3
PPARGC1AQ9UBK2 MTND5P11-201ENST00000511037 1812 ntBASIC6.9□□□□□ -1.3
PPARGC1AQ9UBK2 ZNF229-203ENST00000613197 4835 ntAPPRIS ALT2 TSL 1 (best) BASIC6.9□□□□□ -1.3
PPARGC1AQ9UBK2 GFPT1-202ENST00000361060 8632 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
PPARGC1AQ9UBK2 CYP2C8-201ENST00000371270 1923 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
PPARGC1AQ9UBK2 AADACL3-201ENST00000359318 3662 ntAPPRIS P1 TSL 3 BASIC6.9□□□□□ -1.3
PPARGC1AQ9UBK2 CSDE1-204ENST00000369530 3774 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
PPARGC1AQ9UBK2 AC010894.1-201ENST00000313760 361 ntBASIC6.9□□□□□ -1.3
PPARGC1AQ9UBK2 MTHFD2P5-201ENST00000320415 844 ntBASIC6.9□□□□□ -1.3
PPARGC1AQ9UBK2 RNFT1P3-201ENST00000340898 1052 ntBASIC6.9□□□□□ -1.3
PPARGC1AQ9UBK2 RNU1-5P-201ENST00000362684 144 ntBASIC6.9□□□□□ -1.3
PPARGC1AQ9UBK2 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC6.9□□□□□ -1.3
PPARGC1AQ9UBK2 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC6.9□□□□□ -1.3
PPARGC1AQ9UBK2 RN7SKP97-201ENST00000410966 333 ntBASIC6.9□□□□□ -1.3
PPARGC1AQ9UBK2 Z68694.1-201ENST00000413929 841 ntBASIC6.9□□□□□ -1.3
PPARGC1AQ9UBK2 TEX38-202ENST00000415500 566 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
PPARGC1AQ9UBK2 AL713922.1-201ENST00000416477 747 ntBASIC6.9□□□□□ -1.3
PPARGC1AQ9UBK2 AL391811.1-201ENST00000416908 423 ntTSL 3 BASIC6.9□□□□□ -1.3
PPARGC1AQ9UBK2 AL359962.1-201ENST00000417969 303 ntTSL 5 BASIC6.9□□□□□ -1.3
PPARGC1AQ9UBK2 CDC42P6-201ENST00000421246 576 ntBASIC6.9□□□□□ -1.3
PPARGC1AQ9UBK2 AC007966.1-201ENST00000421998 1179 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
PPARGC1AQ9UBK2 PMS2P3-203ENST00000422064 567 ntTSL 5 BASIC6.9□□□□□ -1.3
PPARGC1AQ9UBK2 BX119904.4-201ENST00000424402 301 ntBASIC6.9□□□□□ -1.3
PPARGC1AQ9UBK2 UBE2V1P1-201ENST00000430836 445 ntBASIC6.9□□□□□ -1.3
PPARGC1AQ9UBK2 AL022324.2-201ENST00000434827 780 ntBASIC6.9□□□□□ -1.3
PPARGC1AQ9UBK2 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC6.9□□□□□ -1.3
PPARGC1AQ9UBK2 AC234771.4-201ENST00000441416 730 ntBASIC6.9□□□□□ -1.3
PPARGC1AQ9UBK2 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC6.9□□□□□ -1.3
PPARGC1AQ9UBK2 AL122008.4-201ENST00000446433 388 ntTSL 3 BASIC6.9□□□□□ -1.3
PPARGC1AQ9UBK2 LIX1L-AS1-206ENST00000447686 846 ntTSL 2 BASIC6.9□□□□□ -1.3
PPARGC1AQ9UBK2 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC6.9□□□□□ -1.3
PPARGC1AQ9UBK2 NPM1P9-201ENST00000453156 844 ntBASIC6.9□□□□□ -1.3
PPARGC1AQ9UBK2 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC6.9□□□□□ -1.3
PPARGC1AQ9UBK2 RN7SL70P-201ENST00000478322 302 ntBASIC6.9□□□□□ -1.3
PPARGC1AQ9UBK2 RPS4XP17-201ENST00000479057 754 ntBASIC6.9□□□□□ -1.3
PPARGC1AQ9UBK2 EIF4E2P2-201ENST00000492033 736 ntBASIC6.9□□□□□ -1.3
PPARGC1AQ9UBK2 SCG5-207ENST00000497208 949 ntTSL 5 BASIC6.9□□□□□ -1.3
PPARGC1AQ9UBK2 AC078788.1-201ENST00000498457 634 ntTSL 3 BASIC6.9□□□□□ -1.3
PPARGC1AQ9UBK2 AC009567.2-201ENST00000502989 349 ntBASIC6.9□□□□□ -1.3
PPARGC1AQ9UBK2 OCIAD1-216ENST00000509122 1204 ntTSL 5 BASIC6.9□□□□□ -1.3
PPARGC1AQ9UBK2 AC139720.1-201ENST00000509497 512 ntTSL 3 BASIC6.9□□□□□ -1.3
PPARGC1AQ9UBK2 AC139713.2-204ENST00000511042 342 ntTSL 5 BASIC6.9□□□□□ -1.3
PPARGC1AQ9UBK2 AC109464.1-201ENST00000511091 819 ntBASIC6.9□□□□□ -1.3
PPARGC1AQ9UBK2 LINC02482-202ENST00000515205 422 ntTSL 2 BASIC6.9□□□□□ -1.3
PPARGC1AQ9UBK2 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC6.9□□□□□ -1.3
PPARGC1AQ9UBK2 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC6.9□□□□□ -1.3
PPARGC1AQ9UBK2 AP000916.1-201ENST00000533869 835 ntBASIC6.9□□□□□ -1.3
PPARGC1AQ9UBK2 PTER-205ENST00000535784 1203 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
PPARGC1AQ9UBK2 AP3S2-214ENST00000560940 519 ntTSL 5 BASIC6.9□□□□□ -1.3
PPARGC1AQ9UBK2 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC6.9□□□□□ -1.3
PPARGC1AQ9UBK2 AL390718.1-201ENST00000566904 506 ntTSL 3 BASIC6.9□□□□□ -1.3
PPARGC1AQ9UBK2 AC040963.1-201ENST00000591900 564 ntTSL 4 BASIC6.9□□□□□ -1.3
PPARGC1AQ9UBK2 AC012213.4-201ENST00000606457 354 ntBASIC6.9□□□□□ -1.3
PPARGC1AQ9UBK2 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC6.9□□□□□ -1.3
PPARGC1AQ9UBK2 AC116165.3-201ENST00000614524 400 ntBASIC6.9□□□□□ -1.3
PPARGC1AQ9UBK2 Six3os1_4.1-201ENST00000615706 324 ntBASIC6.9□□□□□ -1.3
PPARGC1AQ9UBK2 AC009090.3-201ENST00000616553 565 ntBASIC6.9□□□□□ -1.3
PPARGC1AQ9UBK2 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC6.9□□□□□ -1.3
PPARGC1AQ9UBK2 AL121594.5-201ENST00000631724 573 ntBASIC6.9□□□□□ -1.3
PPARGC1AQ9UBK2 AC027559.1-201ENST00000636288 271 ntBASIC6.9□□□□□ -1.3
PPARGC1AQ9UBK2 GRIA3-207ENST00000620443 4943 ntAPPRIS ALT1 TSL 1 (best) BASIC6.9□□□□□ -1.3
PPARGC1AQ9UBK2 AC009779.8-201ENST00000641684 4384 ntBASIC6.9□□□□□ -1.31
PPARGC1AQ9UBK2 SLC41A2-201ENST00000258538 4449 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
PPARGC1AQ9UBK2 AC019117.1-201ENST00000636929 1462 ntTSL 5 BASIC6.9□□□□□ -1.31
PPARGC1AQ9UBK2 AC126755.2-201ENST00000545114 1522 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
PPARGC1AQ9UBK2 AC012668.3-202ENST00000417485 1642 ntTSL 5 BASIC6.9□□□□□ -1.31
PPARGC1AQ9UBK2 ETF1-203ENST00000503014 1736 ntTSL 2 BASIC6.9□□□□□ -1.31
PPARGC1AQ9UBK2 DLG2-230ENST00000532653 2891 ntAPPRIS ALT2 TSL 1 (best) BASIC6.9□□□□□ -1.31
PPARGC1AQ9UBK2 GYPA-214ENST00000641688 1764 ntAPPRIS ALT2 BASIC6.9□□□□□ -1.31
PPARGC1AQ9UBK2 CDKAL1-202ENST00000378610 3115 ntAPPRIS P1 TSL 2 BASIC6.9□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 87.2 ms