Protein–RNA interactions for Protein: Q9HD45

TM9SF3, Transmembrane 9 superfamily member 3, humanhuman

Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3Q9HD45 AJ009632.2-208ENST00000635525 4123 ntTSL 5 BASIC6.1□□□□□ -1.43
TM9SF3Q9HD45 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
TM9SF3Q9HD45 EIF5AL1-201ENST00000520547 3840 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
TM9SF3Q9HD45 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC6.1□□□□□ -1.43
TM9SF3Q9HD45 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
TM9SF3Q9HD45 ALKBH8-205ENST00000428149 4079 ntAPPRIS P3 TSL 1 (best) BASIC6.09□□□□□ -1.43
TM9SF3Q9HD45 MBNL2-201ENST00000343600 4596 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
TM9SF3Q9HD45 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC6.09□□□□□ -1.43
TM9SF3Q9HD45 AP000432.2-201ENST00000624164 2048 ntBASIC6.09□□□□□ -1.43
TM9SF3Q9HD45 AC009804.2-201ENST00000637566 3032 ntTSL 5 BASIC6.09□□□□□ -1.43
TM9SF3Q9HD45 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
TM9SF3Q9HD45 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC6.09□□□□□ -1.43
TM9SF3Q9HD45 CREM-217ENST00000439705 2306 ntTSL 5 BASIC6.09□□□□□ -1.43
TM9SF3Q9HD45 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
TM9SF3Q9HD45 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC6.09□□□□□ -1.43
TM9SF3Q9HD45 CC2D2B-202ENST00000410012 1792 ntAPPRIS ALT2 TSL 2 BASIC6.09□□□□□ -1.43
TM9SF3Q9HD45 MYPN-204ENST00000540630 5707 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
TM9SF3Q9HD45 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC6.09□□□□□ -1.43
TM9SF3Q9HD45 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC6.09□□□□□ -1.43
TM9SF3Q9HD45 OR2B6-201ENST00000244623 942 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
TM9SF3Q9HD45 ITGB3BP-201ENST00000271002 948 ntAPPRIS P3 TSL 1 (best) BASIC6.09□□□□□ -1.43
TM9SF3Q9HD45 OR2G3-201ENST00000320002 930 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
TM9SF3Q9HD45 RNA5SP478-201ENST00000364657 115 ntBASIC6.09□□□□□ -1.43
TM9SF3Q9HD45 AL445238.1-204ENST00000400311 463 ntBASIC6.09□□□□□ -1.43
TM9SF3Q9HD45 AL096711.1-201ENST00000404780 554 ntBASIC6.09□□□□□ -1.43
TM9SF3Q9HD45 CYP2AC1P-201ENST00000407830 1173 ntBASIC6.09□□□□□ -1.43
TM9SF3Q9HD45 MIR1203-201ENST00000408812 85 ntBASIC6.09□□□□□ -1.43
TM9SF3Q9HD45 Z68694.1-201ENST00000413929 841 ntBASIC6.09□□□□□ -1.43
TM9SF3Q9HD45 HMGA1P8-201ENST00000414130 321 ntBASIC6.09□□□□□ -1.43
TM9SF3Q9HD45 AC117434.1-201ENST00000419971 836 ntBASIC6.09□□□□□ -1.43
TM9SF3Q9HD45 AL035660.1-201ENST00000422041 222 ntBASIC6.09□□□□□ -1.43
TM9SF3Q9HD45 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC6.09□□□□□ -1.43
TM9SF3Q9HD45 PCBP2P1-201ENST00000437262 977 ntBASIC6.09□□□□□ -1.43
TM9SF3Q9HD45 VN1R110P-201ENST00000438988 971 ntBASIC6.09□□□□□ -1.43
TM9SF3Q9HD45 GAPDHP23-201ENST00000444823 993 ntBASIC6.09□□□□□ -1.43
TM9SF3Q9HD45 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC6.09□□□□□ -1.43
TM9SF3Q9HD45 HMGN1P36-201ENST00000446623 298 ntBASIC6.09□□□□□ -1.43
TM9SF3Q9HD45 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC6.09□□□□□ -1.43
TM9SF3Q9HD45 AC074386.1-201ENST00000476560 767 ntBASIC6.09□□□□□ -1.43
TM9SF3Q9HD45 AC092865.4-201ENST00000477936 615 ntBASIC6.09□□□□□ -1.43
TM9SF3Q9HD45 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
TM9SF3Q9HD45 TNFRSF17-201ENST00000053243 994 ntAPPRIS P2 TSL 1 (best) BASIC6.09□□□□□ -1.43
TM9SF3Q9HD45 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC6.09□□□□□ -1.43
TM9SF3Q9HD45 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC6.09□□□□□ -1.43
TM9SF3Q9HD45 AL133166.1-205ENST00000548306 569 ntTSL 4 BASIC6.09□□□□□ -1.43
TM9SF3Q9HD45 AC079600.1-201ENST00000550326 297 ntBASIC6.09□□□□□ -1.43
TM9SF3Q9HD45 AC135626.1-201ENST00000556983 435 ntBASIC6.09□□□□□ -1.43
TM9SF3Q9HD45 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC6.09□□□□□ -1.43
TM9SF3Q9HD45 AC233702.7-202ENST00000582941 211 ntBASIC6.09□□□□□ -1.43
TM9SF3Q9HD45 AP000919.2-202ENST00000584431 673 ntTSL 3 BASIC6.09□□□□□ -1.43
TM9SF3Q9HD45 Z98949.1-228ENST00000595093 798 ntTSL 5 BASIC6.09□□□□□ -1.43
TM9SF3Q9HD45 AL353804.2-201ENST00000603360 347 ntTSL 5 BASIC6.09□□□□□ -1.43
TM9SF3Q9HD45 LAPTM4BP2-201ENST00000604542 446 ntBASIC6.09□□□□□ -1.43
TM9SF3Q9HD45 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.43
TM9SF3Q9HD45 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
TM9SF3Q9HD45 CHD6-202ENST00000373222 2477 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
TM9SF3Q9HD45 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC6.09□□□□□ -1.43
TM9SF3Q9HD45 AL353763.1-201ENST00000624467 1628 ntBASIC6.09□□□□□ -1.43
TM9SF3Q9HD45 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC6.09□□□□□ -1.43
TM9SF3Q9HD45 ARCN1-202ENST00000359415 4038 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
TM9SF3Q9HD45 GUCY1B2-204ENST00000531898 1979 ntBASIC6.09□□□□□ -1.43
TM9SF3Q9HD45 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC6.09□□□□□ -1.44
TM9SF3Q9HD45 CYLD-201ENST00000311559 5371 ntTSL 5 BASIC6.08□□□□□ -1.44
TM9SF3Q9HD45 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC6.08□□□□□ -1.44
TM9SF3Q9HD45 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
TM9SF3Q9HD45 AC015689.2-201ENST00000528172 1738 ntBASIC6.08□□□□□ -1.44
TM9SF3Q9HD45 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC6.08□□□□□ -1.44
TM9SF3Q9HD45 POT1-202ENST00000393329 3950 ntTSL 5 BASIC6.08□□□□□ -1.44
TM9SF3Q9HD45 TRPC1-205ENST00000612385 3620 ntAPPRIS P3 TSL 1 (best) BASIC6.08□□□□□ -1.44
TM9SF3Q9HD45 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
TM9SF3Q9HD45 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC6.08□□□□□ -1.44
TM9SF3Q9HD45 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
TM9SF3Q9HD45 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
TM9SF3Q9HD45 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
TM9SF3Q9HD45 RNA5SP242-201ENST00000364171 118 ntBASIC6.08□□□□□ -1.44
TM9SF3Q9HD45 RNU1-59P-201ENST00000364829 162 ntBASIC6.08□□□□□ -1.44
TM9SF3Q9HD45 SNORA43.1-201ENST00000364863 140 ntBASIC6.08□□□□□ -1.44
TM9SF3Q9HD45 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC6.08□□□□□ -1.44
TM9SF3Q9HD45 BX284632.2-201ENST00000421091 399 ntBASIC6.08□□□□□ -1.44
TM9SF3Q9HD45 REREP1Y-201ENST00000422655 198 ntBASIC6.08□□□□□ -1.44
TM9SF3Q9HD45 ICA1L-210ENST00000425178 879 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
TM9SF3Q9HD45 AL356481.1-202ENST00000426704 970 ntTSL 2 BASIC6.08□□□□□ -1.44
TM9SF3Q9HD45 AC108051.1-201ENST00000435291 549 ntTSL 3 BASIC6.08□□□□□ -1.44
TM9SF3Q9HD45 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC6.08□□□□□ -1.44
TM9SF3Q9HD45 REREP2Y-201ENST00000439103 200 ntBASIC6.08□□□□□ -1.44
TM9SF3Q9HD45 AL512605.1-202ENST00000441919 381 ntBASIC6.08□□□□□ -1.44
TM9SF3Q9HD45 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
TM9SF3Q9HD45 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC6.08□□□□□ -1.44
TM9SF3Q9HD45 AL359955.2-201ENST00000445380 353 ntBASIC6.08□□□□□ -1.44
TM9SF3Q9HD45 AC009963.4-201ENST00000448535 339 ntBASIC6.08□□□□□ -1.44
TM9SF3Q9HD45 SNX18P26-201ENST00000458433 740 ntBASIC6.08□□□□□ -1.44
TM9SF3Q9HD45 MRE11-209ENST00000540013 1212 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
TM9SF3Q9HD45 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC6.08□□□□□ -1.44
TM9SF3Q9HD45 ANKRD20A5P-203ENST00000580200 566 ntTSL 5 BASIC6.08□□□□□ -1.44
TM9SF3Q9HD45 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC6.08□□□□□ -1.44
TM9SF3Q9HD45 LSM1P2-201ENST00000604911 322 ntBASIC6.08□□□□□ -1.44
TM9SF3Q9HD45 AC008555.7-201ENST00000605008 583 ntBASIC6.08□□□□□ -1.44
TM9SF3Q9HD45 AL645933.2-201ENST00000606743 1207 ntBASIC6.08□□□□□ -1.44
TM9SF3Q9HD45 U1.25-201ENST00000614085 162 ntBASIC6.08□□□□□ -1.44
TM9SF3Q9HD45 U1.34-201ENST00000618578 162 ntBASIC6.08□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 102.9 ms