Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 USP46-201ENST00000441222 7954 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
FOXP3Q9BZS1 ZNF19-206ENST00000565100 2087 ntTSL 5 BASIC7.07□□□□□ -1.28
FOXP3Q9BZS1 BROX-201ENST00000340934 4124 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
FOXP3Q9BZS1 HPS5-205ENST00000438420 4147 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
FOXP3Q9BZS1 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC7.07□□□□□ -1.28
FOXP3Q9BZS1 AMD1-203ENST00000368882 3059 ntTSL 2 BASIC7.07□□□□□ -1.28
FOXP3Q9BZS1 ZC3H11A-201ENST00000332127 5015 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
FOXP3Q9BZS1 LY86-AS1-202ENST00000435641 2819 ntTSL 2 BASIC7.06□□□□□ -1.28
FOXP3Q9BZS1 GJB6-205ENST00000636852 1840 ntAPPRIS P1 TSL 4 BASIC7.06□□□□□ -1.28
FOXP3Q9BZS1 PBX1-221ENST00000612123 6062 ntTSL 5 BASIC7.06□□□□□ -1.28
FOXP3Q9BZS1 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
FOXP3Q9BZS1 MED23-201ENST00000354577 4581 ntAPPRIS ALT1 TSL 1 (best) BASIC7.06□□□□□ -1.28
FOXP3Q9BZS1 LINC00922-203ENST00000569736 1760 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
FOXP3Q9BZS1 EMC2-201ENST00000220853 1243 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
FOXP3Q9BZS1 PCYT1B-201ENST00000356768 1289 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
FOXP3Q9BZS1 RNU6-697P-201ENST00000363348 107 ntBASIC7.06□□□□□ -1.28
FOXP3Q9BZS1 S100A7L2-201ENST00000368725 339 ntAPPRIS P1 TSL 5 BASIC7.06□□□□□ -1.28
FOXP3Q9BZS1 RNU6-796P-201ENST00000391086 107 ntBASIC7.06□□□□□ -1.28
FOXP3Q9BZS1 AL589994.1-201ENST00000404962 340 ntBASIC7.06□□□□□ -1.28
FOXP3Q9BZS1 FCF1P5-201ENST00000406490 482 ntBASIC7.06□□□□□ -1.28
FOXP3Q9BZS1 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC7.06□□□□□ -1.28
FOXP3Q9BZS1 AC023469.1-201ENST00000409243 469 ntTSL 3 BASIC7.06□□□□□ -1.28
FOXP3Q9BZS1 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC7.06□□□□□ -1.28
FOXP3Q9BZS1 AC002511.2-201ENST00000413796 450 ntTSL 2 BASIC7.06□□□□□ -1.28
FOXP3Q9BZS1 AL158825.1-201ENST00000414735 521 ntBASIC7.06□□□□□ -1.28
FOXP3Q9BZS1 AL157698.1-201ENST00000415190 1011 ntBASIC7.06□□□□□ -1.28
FOXP3Q9BZS1 OFD1P11Y-201ENST00000418213 1177 ntBASIC7.06□□□□□ -1.28
FOXP3Q9BZS1 AC016716.2-201ENST00000418621 486 ntTSL 3 BASIC7.06□□□□□ -1.28
FOXP3Q9BZS1 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC7.06□□□□□ -1.28
FOXP3Q9BZS1 GTF2IP3-201ENST00000433887 494 ntBASIC7.06□□□□□ -1.28
FOXP3Q9BZS1 SLC6A13-202ENST00000436453 1101 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
FOXP3Q9BZS1 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC7.06□□□□□ -1.28
FOXP3Q9BZS1 AC019117.1-202ENST00000439046 589 ntTSL 3 BASIC7.06□□□□□ -1.28
FOXP3Q9BZS1 UBQLN1P1-207ENST00000441056 1169 ntBASIC7.06□□□□□ -1.28
FOXP3Q9BZS1 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC7.06□□□□□ -1.28
FOXP3Q9BZS1 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC7.06□□□□□ -1.28
FOXP3Q9BZS1 ZNF286A-205ENST00000472486 827 ntTSL 2 BASIC7.06□□□□□ -1.28
FOXP3Q9BZS1 STRADBP1-201ENST00000478954 1281 ntBASIC7.06□□□□□ -1.28
FOXP3Q9BZS1 RPS12P31-201ENST00000491419 398 ntBASIC7.06□□□□□ -1.28
FOXP3Q9BZS1 RN7SL518P-201ENST00000491887 280 ntBASIC7.06□□□□□ -1.28
FOXP3Q9BZS1 SPTSSB-202ENST00000497137 880 ntAPPRIS P1 TSL 3 BASIC7.06□□□□□ -1.28
FOXP3Q9BZS1 AC112184.1-201ENST00000505179 312 ntBASIC7.06□□□□□ -1.28
FOXP3Q9BZS1 AC002401.2-201ENST00000511361 430 ntTSL 3 BASIC7.06□□□□□ -1.28
FOXP3Q9BZS1 MTND1P5-201ENST00000517906 940 ntBASIC7.06□□□□□ -1.28
FOXP3Q9BZS1 TEK-204ENST00000519097 3836 ntTSL 2 BASIC7.06□□□□□ -1.28
FOXP3Q9BZS1 HMGB1P1-201ENST00000522557 636 ntBASIC7.06□□□□□ -1.28
FOXP3Q9BZS1 AP003461.1-201ENST00000528866 78 ntBASIC7.06□□□□□ -1.28
FOXP3Q9BZS1 AP001107.4-201ENST00000533576 539 ntTSL 3 BASIC7.06□□□□□ -1.28
FOXP3Q9BZS1 AC092865.1-201ENST00000544395 1023 ntBASIC7.06□□□□□ -1.28
FOXP3Q9BZS1 AC023161.2-201ENST00000551218 780 ntBASIC7.06□□□□□ -1.28
FOXP3Q9BZS1 AL391156.1-201ENST00000554965 554 ntBASIC7.06□□□□□ -1.28
FOXP3Q9BZS1 AL356017.1-201ENST00000556796 594 ntTSL 4 BASIC7.06□□□□□ -1.28
FOXP3Q9BZS1 TRIM69-204ENST00000558329 1211 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
FOXP3Q9BZS1 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC7.06□□□□□ -1.28
FOXP3Q9BZS1 AC008752.2-201ENST00000591174 750 ntTSL 3 BASIC7.06□□□□□ -1.28
FOXP3Q9BZS1 RPARP-AS1-204ENST00000594818 445 ntTSL 3 BASIC7.06□□□□□ -1.28
FOXP3Q9BZS1 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC7.06□□□□□ -1.28
FOXP3Q9BZS1 AC092960.1-201ENST00000604762 351 ntBASIC7.06□□□□□ -1.28
FOXP3Q9BZS1 C5orf63-208ENST00000607731 478 ntTSL 5 BASIC7.06□□□□□ -1.28
FOXP3Q9BZS1 AC245297.2-201ENST00000610119 565 ntBASIC7.06□□□□□ -1.28
FOXP3Q9BZS1 HTR1DP1-201ENST00000616500 888 ntBASIC7.06□□□□□ -1.28
FOXP3Q9BZS1 AC244100.1-201ENST00000618141 407 ntTSL 5 BASIC7.06□□□□□ -1.28
FOXP3Q9BZS1 Metazoa_SRP.81-201ENST00000618466 316 ntBASIC7.06□□□□□ -1.28
FOXP3Q9BZS1 AC022079.2-201ENST00000619739 566 ntBASIC7.06□□□□□ -1.28
FOXP3Q9BZS1 AL031667.3-201ENST00000620124 655 ntBASIC7.06□□□□□ -1.28
FOXP3Q9BZS1 UGP2-231ENST00000627474 264 ntTSL 5 BASIC7.06□□□□□ -1.28
FOXP3Q9BZS1 AC135068.11-201ENST00000636378 921 ntBASIC7.06□□□□□ -1.28
FOXP3Q9BZS1 AC103706.2-201ENST00000638080 240 ntBASIC7.06□□□□□ -1.28
FOXP3Q9BZS1 KIF1B-204ENST00000377086 10669 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
FOXP3Q9BZS1 MAT2B-201ENST00000280969 2226 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
FOXP3Q9BZS1 RBPJP6-201ENST00000411556 1431 ntBASIC7.06□□□□□ -1.28
FOXP3Q9BZS1 FASTKD2-203ENST00000403094 2344 ntAPPRIS P1 TSL 5 BASIC7.06□□□□□ -1.28
FOXP3Q9BZS1 NLRP4-203ENST00000587891 3201 ntTSL 2 BASIC7.06□□□□□ -1.28
FOXP3Q9BZS1 USP1-202ENST00000371146 3507 ntAPPRIS P1 TSL 5 BASIC7.06□□□□□ -1.28
FOXP3Q9BZS1 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC7.06□□□□□ -1.28
FOXP3Q9BZS1 AC025263.3-201ENST00000622965 1396 ntBASIC7.06□□□□□ -1.28
FOXP3Q9BZS1 CMAHP-202ENST00000377993 1681 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
FOXP3Q9BZS1 ETFBKMT-201ENST00000357721 6128 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
FOXP3Q9BZS1 AL161901.1-201ENST00000624954 3425 ntBASIC7.05□□□□□ -1.28
FOXP3Q9BZS1 MDGA2-201ENST00000357362 2965 ntTSL 5 BASIC7.05□□□□□ -1.28
FOXP3Q9BZS1 OR4G1P-202ENST00000641173 1788 ntBASIC7.05□□□□□ -1.28
FOXP3Q9BZS1 LGI1-219ENST00000636155 1618 ntTSL 5 BASIC7.05□□□□□ -1.28
FOXP3Q9BZS1 PHF11-201ENST00000357596 1471 ntAPPRIS ALT2 TSL 5 BASIC7.05□□□□□ -1.28
FOXP3Q9BZS1 ZNF736P9Y-201ENST00000439586 1345 ntBASIC7.05□□□□□ -1.28
FOXP3Q9BZS1 ANKRD46-201ENST00000335659 2649 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
FOXP3Q9BZS1 OR5M2P-202ENST00000641241 4242 ntBASIC7.05□□□□□ -1.28
FOXP3Q9BZS1 PLCB4-202ENST00000378473 5619 ntAPPRIS ALT1 TSL 1 (best) BASIC7.05□□□□□ -1.28
FOXP3Q9BZS1 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
FOXP3Q9BZS1 AL356479.1-203ENST00000411798 1440 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
FOXP3Q9BZS1 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
FOXP3Q9BZS1 MT1A-201ENST00000290705 396 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
FOXP3Q9BZS1 CEP112-201ENST00000317442 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC7.05□□□□□ -1.28
FOXP3Q9BZS1 MTHFD2P5-201ENST00000320415 844 ntBASIC7.05□□□□□ -1.28
FOXP3Q9BZS1 CCR8-201ENST00000326306 1253 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
FOXP3Q9BZS1 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC7.05□□□□□ -1.28
FOXP3Q9BZS1 RNU5A-2P-201ENST00000384337 116 ntBASIC7.05□□□□□ -1.28
FOXP3Q9BZS1 AL603865.2-201ENST00000401679 213 ntBASIC7.05□□□□□ -1.28
FOXP3Q9BZS1 MTERF4-205ENST00000407095 799 ntTSL 2 BASIC7.05□□□□□ -1.28
FOXP3Q9BZS1 RN7SKP188-201ENST00000410789 317 ntBASIC7.05□□□□□ -1.28
FOXP3Q9BZS1 AL445183.3-201ENST00000414168 502 ntBASIC7.05□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 91 ms