Protein–RNA interactions for Protein: Q99909

SSX3, Protein SSX3, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3Q99909 AC133552.4-201ENST00000576103 676 ntBASIC5.28□□□□□ -1.56
SSX3Q99909 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC5.28□□□□□ -1.56
SSX3Q99909 RN7SL230P-201ENST00000580835 303 ntBASIC5.28□□□□□ -1.56
SSX3Q99909 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC5.28□□□□□ -1.56
SSX3Q99909 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC5.28□□□□□ -1.56
SSX3Q99909 AC063977.7-201ENST00000594454 337 ntBASIC5.28□□□□□ -1.56
SSX3Q99909 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC5.28□□□□□ -1.56
SSX3Q99909 RMDN2-AS1-203ENST00000601029 613 ntTSL 5 BASIC5.28□□□□□ -1.56
SSX3Q99909 AL356986.1-201ENST00000604085 341 ntBASIC5.28□□□□□ -1.56
SSX3Q99909 IGKV2OR2-10-201ENST00000613976 311 ntBASIC5.28□□□□□ -1.56
SSX3Q99909 MMP2-AS1-203ENST00000620495 625 ntTSL 3 BASIC5.28□□□□□ -1.56
SSX3Q99909 LINC00836-201ENST00000625325 582 ntTSL 4 BASIC5.28□□□□□ -1.56
SSX3Q99909 AL513283.1-203ENST00000640010 891 ntTSL 5 BASIC5.28□□□□□ -1.56
SSX3Q99909 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
SSX3Q99909 ING3-204ENST00000431467 1447 ntTSL 2 BASIC5.28□□□□□ -1.56
SSX3Q99909 AC005702.3-201ENST00000585345 1447 ntBASIC5.28□□□□□ -1.56
SSX3Q99909 TEX11-202ENST00000374320 2224 ntTSL 2 BASIC5.28□□□□□ -1.56
SSX3Q99909 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC5.28□□□□□ -1.56
SSX3Q99909 RAD54B-201ENST00000297592 1879 ntTSL 2 BASIC5.28□□□□□ -1.56
SSX3Q99909 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
SSX3Q99909 SULT1C2-205ENST00000437390 1359 ntTSL 2 BASIC5.28□□□□□ -1.56
SSX3Q99909 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC5.28□□□□□ -1.56
SSX3Q99909 ZNF675-201ENST00000359788 2301 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
SSX3Q99909 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
SSX3Q99909 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
SSX3Q99909 AC022613.3-201ENST00000560740 1346 ntBASIC5.27□□□□□ -1.57
SSX3Q99909 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
SSX3Q99909 GLYATL1P1-201ENST00000528297 1607 ntBASIC5.27□□□□□ -1.57
SSX3Q99909 FASTKD1-204ENST00000453153 2967 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
SSX3Q99909 EMC2-201ENST00000220853 1243 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
SSX3Q99909 SPATA9-201ENST00000274432 1100 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
SSX3Q99909 FASLG-201ENST00000340030 917 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
SSX3Q99909 RNU4-23P-201ENST00000362839 140 ntBASIC5.27□□□□□ -1.57
SSX3Q99909 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC5.27□□□□□ -1.57
SSX3Q99909 C1orf194-202ENST00000369945 534 ntTSL 5 BASIC5.27□□□□□ -1.57
SSX3Q99909 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC5.27□□□□□ -1.57
SSX3Q99909 PRPS1-202ENST00000372419 628 ntTSL 2 BASIC5.27□□□□□ -1.57
SSX3Q99909 EEF1AKMT1-201ENST00000382754 875 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
SSX3Q99909 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC5.27□□□□□ -1.57
SSX3Q99909 RPS20P25-201ENST00000412447 352 ntBASIC5.27□□□□□ -1.57
SSX3Q99909 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC5.27□□□□□ -1.57
SSX3Q99909 RPS17P17-201ENST00000419392 409 ntBASIC5.27□□□□□ -1.57
SSX3Q99909 RPL24P2-201ENST00000421023 475 ntBASIC5.27□□□□□ -1.57
SSX3Q99909 ARAFP1-201ENST00000422172 605 ntBASIC5.27□□□□□ -1.57
SSX3Q99909 AL139158.1-201ENST00000424719 340 ntBASIC5.27□□□□□ -1.57
SSX3Q99909 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC5.27□□□□□ -1.57
SSX3Q99909 GTF3AP6-201ENST00000432585 986 ntBASIC5.27□□□□□ -1.57
SSX3Q99909 AC003991.1-210ENST00000434733 1048 ntTSL 3 BASIC5.27□□□□□ -1.57
SSX3Q99909 TIMM8BP2-201ENST00000445940 251 ntBASIC5.27□□□□□ -1.57
SSX3Q99909 EEF1B2P3-201ENST00000447718 678 ntBASIC5.27□□□□□ -1.57
SSX3Q99909 AC097359.1-201ENST00000447946 463 ntBASIC5.27□□□□□ -1.57
SSX3Q99909 AC078785.2-201ENST00000462010 1253 ntTSL 3 BASIC5.27□□□□□ -1.57
SSX3Q99909 AC105918.1-201ENST00000474399 838 ntBASIC5.27□□□□□ -1.57
SSX3Q99909 AC131392.1-201ENST00000506490 633 ntBASIC5.27□□□□□ -1.57
SSX3Q99909 GUSBP9-201ENST00000510138 584 ntBASIC5.27□□□□□ -1.57
SSX3Q99909 CSNK1A1-207ENST00000515768 1098 ntAPPRIS P4 TSL 5 BASIC5.27□□□□□ -1.57
SSX3Q99909 AP005639.1-201ENST00000526939 192 ntBASIC5.27□□□□□ -1.57
SSX3Q99909 AC135983.3-201ENST00000528049 1226 ntBASIC5.27□□□□□ -1.57
SSX3Q99909 AC105243.1-201ENST00000563172 1165 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
SSX3Q99909 AC211486.2-201ENST00000576046 280 ntTSL 3 BASIC5.27□□□□□ -1.57
SSX3Q99909 MIR4675-201ENST00000577898 77 ntBASIC5.27□□□□□ -1.57
SSX3Q99909 AC010326.3-201ENST00000597780 679 ntTSL 5 BASIC5.27□□□□□ -1.57
SSX3Q99909 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC5.27□□□□□ -1.57
SSX3Q99909 AL589765.6-201ENST00000601909 549 ntBASIC5.27□□□□□ -1.57
SSX3Q99909 AC091167.5-201ENST00000605689 894 ntBASIC5.27□□□□□ -1.57
SSX3Q99909 PCGEM1-202ENST00000606314 759 ntTSL 5 BASIC5.27□□□□□ -1.57
SSX3Q99909 AC004241.3-201ENST00000611728 517 ntBASIC5.27□□□□□ -1.57
SSX3Q99909 OSTC-205ENST00000613215 876 ntTSL 2 BASIC5.27□□□□□ -1.57
SSX3Q99909 MIR6085-201ENST00000618314 110 ntBASIC5.27□□□□□ -1.57
SSX3Q99909 AC006840.1-201ENST00000623069 542 ntBASIC5.27□□□□□ -1.57
SSX3Q99909 AC138965.3-201ENST00000623875 498 ntBASIC5.27□□□□□ -1.57
SSX3Q99909 AL355860.1-201ENST00000636087 1229 ntAPPRIS P1 TSL 2 BASIC5.27□□□□□ -1.57
SSX3Q99909 OR8G5-203ENST00000641992 1560 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
SSX3Q99909 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC5.27□□□□□ -1.57
SSX3Q99909 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
SSX3Q99909 LINC01741-201ENST00000427173 1666 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
SSX3Q99909 GABRA3-204ENST00000535043 1697 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
SSX3Q99909 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC5.27□□□□□ -1.57
SSX3Q99909 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
SSX3Q99909 MYBPC1-223ENST00000553190 3777 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
SSX3Q99909 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
SSX3Q99909 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
SSX3Q99909 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
SSX3Q99909 SOHLH2-202ENST00000379881 2193 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
SSX3Q99909 AL355488.2-201ENST00000609909 2850 ntBASIC5.26□□□□□ -1.57
SSX3Q99909 SOS1-201ENST00000395038 4123 ntAPPRIS ALT2 TSL 5 BASIC5.26□□□□□ -1.57
SSX3Q99909 MGC4859-201ENST00000634803 3118 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
SSX3Q99909 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
SSX3Q99909 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
SSX3Q99909 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
SSX3Q99909 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
SSX3Q99909 LUZP2-201ENST00000336930 3553 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
SSX3Q99909 MEPE-209ENST00000560249 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
SSX3Q99909 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
SSX3Q99909 PSMA6-201ENST00000261479 1029 ntAPPRIS P2 TSL 1 (best) BASIC5.26□□□□□ -1.57
SSX3Q99909 RPL23AP17-201ENST00000401064 499 ntBASIC5.26□□□□□ -1.57
SSX3Q99909 ATF2-205ENST00000409499 801 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
SSX3Q99909 SULT1C2-204ENST00000409880 1206 ntTSL 3 BASIC5.26□□□□□ -1.57
SSX3Q99909 ABCA12-203ENST00000412081 485 ntTSL 2 BASIC5.26□□□□□ -1.57
SSX3Q99909 MRPS21P5-201ENST00000417885 231 ntBASIC5.26□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 124.5 ms