Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 U3.10-201ENST00000364459 214 ntBASIC4.41□□□□□ -1.7
AP1S3Q96PC3 MYL6P5-201ENST00000412707 459 ntBASIC4.41□□□□□ -1.7
AP1S3Q96PC3 NPM1P40-201ENST00000412758 733 ntBASIC4.41□□□□□ -1.7
AP1S3Q96PC3 AC002127.1-201ENST00000421305 225 ntBASIC4.41□□□□□ -1.7
AP1S3Q96PC3 AL353751.1-203ENST00000437032 603 ntTSL 3 BASIC4.41□□□□□ -1.7
AP1S3Q96PC3 AL138767.3-201ENST00000438082 495 ntTSL 3 BASIC4.41□□□□□ -1.7
AP1S3Q96PC3 OR3D1P-201ENST00000438288 955 ntBASIC4.41□□□□□ -1.7
AP1S3Q96PC3 SOCS5P1-201ENST00000440415 949 ntBASIC4.41□□□□□ -1.7
AP1S3Q96PC3 AC100823.1-201ENST00000442274 480 ntTSL 3 BASIC4.41□□□□□ -1.7
AP1S3Q96PC3 AL356133.1-201ENST00000444762 372 ntBASIC4.41□□□□□ -1.7
AP1S3Q96PC3 AL355472.1-201ENST00000451795 575 ntTSL 5 BASIC4.41□□□□□ -1.7
AP1S3Q96PC3 RBMY2EP-202ENST00000456360 940 ntBASIC4.41□□□□□ -1.7
AP1S3Q96PC3 AC139769.1-201ENST00000471224 1001 ntTSL 3 BASIC4.41□□□□□ -1.7
AP1S3Q96PC3 RPS10P28-201ENST00000480396 498 ntBASIC4.41□□□□□ -1.7
AP1S3Q96PC3 PFN2-209ENST00000481275 560 ntTSL 4 BASIC4.41□□□□□ -1.7
AP1S3Q96PC3 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC4.41□□□□□ -1.7
AP1S3Q96PC3 RN7SL591P-201ENST00000496150 292 ntBASIC4.41□□□□□ -1.7
AP1S3Q96PC3 CCDC11P1-201ENST00000503137 1162 ntBASIC4.41□□□□□ -1.7
AP1S3Q96PC3 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC4.41□□□□□ -1.7
AP1S3Q96PC3 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC4.41□□□□□ -1.7
AP1S3Q96PC3 TOMM22P4-201ENST00000511318 336 ntBASIC4.41□□□□□ -1.7
AP1S3Q96PC3 AC008601.1-201ENST00000519892 527 ntTSL 4 BASIC4.41□□□□□ -1.7
AP1S3Q96PC3 VPS37A-208ENST00000521005 479 ntTSL 3 BASIC4.41□□□□□ -1.7
AP1S3Q96PC3 PATE4-203ENST00000534411 897 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
AP1S3Q96PC3 CSAG2-201ENST00000535353 237 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
AP1S3Q96PC3 AP001858.2-201ENST00000536213 601 ntBASIC4.41□□□□□ -1.7
AP1S3Q96PC3 RERGL-202ENST00000536890 367 ntTSL 3 BASIC4.41□□□□□ -1.7
AP1S3Q96PC3 AL163952.1-202ENST00000569625 600 ntBASIC4.41□□□□□ -1.7
AP1S3Q96PC3 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC4.41□□□□□ -1.7
AP1S3Q96PC3 AC009121.2-202ENST00000572706 505 ntTSL 3 BASIC4.41□□□□□ -1.7
AP1S3Q96PC3 RNU4ATAC-201ENST00000580972 127 ntBASIC4.41□□□□□ -1.7
AP1S3Q96PC3 AC008507.3-201ENST00000585753 472 ntBASIC4.41□□□□□ -1.7
AP1S3Q96PC3 LINC01198-204ENST00000594153 552 ntTSL 3 BASIC4.41□□□□□ -1.7
AP1S3Q96PC3 RPARP-AS1-204ENST00000594818 445 ntTSL 3 BASIC4.41□□□□□ -1.7
AP1S3Q96PC3 COX6CP7-201ENST00000597056 208 ntBASIC4.41□□□□□ -1.7
AP1S3Q96PC3 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC4.41□□□□□ -1.7
AP1S3Q96PC3 AL353807.4-201ENST00000604995 257 ntBASIC4.41□□□□□ -1.7
AP1S3Q96PC3 AC008555.7-201ENST00000605008 583 ntBASIC4.41□□□□□ -1.7
AP1S3Q96PC3 CCL23-203ENST00000615050 624 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
AP1S3Q96PC3 ZNHIT3-208ENST00000619730 926 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
AP1S3Q96PC3 AC018558.4-201ENST00000622153 281 ntBASIC4.41□□□□□ -1.7
AP1S3Q96PC3 LINC01676-209ENST00000623043 896 ntTSL 4 BASIC4.41□□□□□ -1.7
AP1S3Q96PC3 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC4.41□□□□□ -1.7
AP1S3Q96PC3 OR10R2-202ENST00000641067 1132 ntAPPRIS ALT2 BASIC4.41□□□□□ -1.7
AP1S3Q96PC3 OR10R2-203ENST00000641400 975 ntAPPRIS ALT2 BASIC4.41□□□□□ -1.7
AP1S3Q96PC3 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
AP1S3Q96PC3 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.41□□□□□ -1.7
AP1S3Q96PC3 ZNF675-201ENST00000359788 2301 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
AP1S3Q96PC3 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
AP1S3Q96PC3 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
AP1S3Q96PC3 LYPD6B-202ENST00000409029 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
AP1S3Q96PC3 RUNX1T1-234ENST00000521553 1346 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
AP1S3Q96PC3 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
AP1S3Q96PC3 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC4.41□□□□□ -1.7
AP1S3Q96PC3 AC005224.3-201ENST00000584683 2140 ntBASIC4.4□□□□□ -1.7
AP1S3Q96PC3 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC4.4□□□□□ -1.7
AP1S3Q96PC3 HMBOX1-206ENST00000519047 1551 ntTSL 5 BASIC4.4□□□□□ -1.7
AP1S3Q96PC3 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
AP1S3Q96PC3 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
AP1S3Q96PC3 AC024587.1-201ENST00000505925 2157 ntBASIC4.4□□□□□ -1.7
AP1S3Q96PC3 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
AP1S3Q96PC3 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC4.4□□□□□ -1.7
AP1S3Q96PC3 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC4.4□□□□□ -1.7
AP1S3Q96PC3 SPP1-202ENST00000360804 1196 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
AP1S3Q96PC3 AC026310.1-201ENST00000396004 378 ntBASIC4.4□□□□□ -1.71
AP1S3Q96PC3 VIM2P-201ENST00000402383 1294 ntBASIC4.4□□□□□ -1.71
AP1S3Q96PC3 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.71
AP1S3Q96PC3 SNORA77.2-201ENST00000408571 112 ntBASIC4.4□□□□□ -1.71
AP1S3Q96PC3 PTCD2P2-201ENST00000415579 1095 ntBASIC4.4□□□□□ -1.71
AP1S3Q96PC3 RPL21P50-201ENST00000417698 477 ntBASIC4.4□□□□□ -1.71
AP1S3Q96PC3 RPL6P21-201ENST00000418672 846 ntBASIC4.4□□□□□ -1.71
AP1S3Q96PC3 AC096669.1-201ENST00000422203 648 ntTSL 5 BASIC4.4□□□□□ -1.71
AP1S3Q96PC3 AL451047.1-201ENST00000424451 814 ntTSL 3 BASIC4.4□□□□□ -1.71
AP1S3Q96PC3 BMS1P11-201ENST00000442351 885 ntBASIC4.4□□□□□ -1.71
AP1S3Q96PC3 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC4.4□□□□□ -1.71
AP1S3Q96PC3 MED28P3-201ENST00000444288 531 ntBASIC4.4□□□□□ -1.71
AP1S3Q96PC3 LINC01105-205ENST00000450794 580 ntTSL 4 BASIC4.4□□□□□ -1.71
AP1S3Q96PC3 BMS1P9-201ENST00000457640 885 ntBASIC4.4□□□□□ -1.71
AP1S3Q96PC3 AC073486.1-202ENST00000458437 489 ntTSL 3 BASIC4.4□□□□□ -1.71
AP1S3Q96PC3 RN7SL372P-201ENST00000461982 298 ntBASIC4.4□□□□□ -1.71
AP1S3Q96PC3 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC4.4□□□□□ -1.71
AP1S3Q96PC3 OR4D12P-201ENST00000509361 911 ntBASIC4.4□□□□□ -1.71
AP1S3Q96PC3 RN7SKP288-201ENST00000516227 268 ntBASIC4.4□□□□□ -1.71
AP1S3Q96PC3 Y_RNA.710-201ENST00000516975 110 ntBASIC4.4□□□□□ -1.71
AP1S3Q96PC3 ATP6V0E1-202ENST00000517669 502 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
AP1S3Q96PC3 AZIN1-AS1-208ENST00000519257 619 ntTSL 3 BASIC4.4□□□□□ -1.71
AP1S3Q96PC3 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC4.4□□□□□ -1.71
AP1S3Q96PC3 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC4.4□□□□□ -1.71
AP1S3Q96PC3 AC084824.2-201ENST00000548906 345 ntBASIC4.4□□□□□ -1.71
AP1S3Q96PC3 AC012038.2-201ENST00000553006 256 ntTSL 3 BASIC4.4□□□□□ -1.71
AP1S3Q96PC3 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.71
AP1S3Q96PC3 DAAM1-208ENST00000556135 582 ntTSL 3 BASIC4.4□□□□□ -1.71
AP1S3Q96PC3 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC4.4□□□□□ -1.71
AP1S3Q96PC3 AC007346.2-201ENST00000564816 892 ntBASIC4.4□□□□□ -1.71
AP1S3Q96PC3 AC010266.1-201ENST00000568962 442 ntTSL 5 BASIC4.4□□□□□ -1.71
AP1S3Q96PC3 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC4.4□□□□□ -1.71
AP1S3Q96PC3 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC4.4□□□□□ -1.71
AP1S3Q96PC3 AC141002.1-201ENST00000607025 279 ntBASIC4.4□□□□□ -1.71
AP1S3Q96PC3 AC004921.1-201ENST00000608884 733 ntTSL 5 BASIC4.4□□□□□ -1.71
AP1S3Q96PC3 RN7SL261P-201ENST00000613441 282 ntBASIC4.4□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 97.2 ms