Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
COL21A1Q96P44 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
COL21A1Q96P44 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
COL21A1Q96P44 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
COL21A1Q96P44 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
COL21A1Q96P44 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC5.6□□□□□ -1.51
COL21A1Q96P44 AL161756.3-201ENST00000641216 2071 ntBASIC5.6□□□□□ -1.51
COL21A1Q96P44 PCAT19-201ENST00000588495 3472 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
COL21A1Q96P44 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC5.6□□□□□ -1.51
COL21A1Q96P44 ING3-204ENST00000431467 1447 ntTSL 2 BASIC5.6□□□□□ -1.51
COL21A1Q96P44 PMS2-203ENST00000382321 1386 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
COL21A1Q96P44 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
COL21A1Q96P44 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
COL21A1Q96P44 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
COL21A1Q96P44 TRAV1-2-201ENST00000390423 402 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
COL21A1Q96P44 KRTAP3-1-201ENST00000391588 594 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
COL21A1Q96P44 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
COL21A1Q96P44 PPP1R7-203ENST00000401987 820 ntTSL 3 BASIC5.6□□□□□ -1.51
COL21A1Q96P44 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC5.6□□□□□ -1.51
COL21A1Q96P44 RPL24P2-201ENST00000421023 475 ntBASIC5.6□□□□□ -1.51
COL21A1Q96P44 LINC01114-201ENST00000421071 482 ntTSL 3 BASIC5.6□□□□□ -1.51
COL21A1Q96P44 MRPS21P2-201ENST00000424704 264 ntBASIC5.6□□□□□ -1.51
COL21A1Q96P44 AC007679.3-201ENST00000434035 414 ntBASIC5.6□□□□□ -1.51
COL21A1Q96P44 PNKDP1-201ENST00000435914 430 ntBASIC5.6□□□□□ -1.51
COL21A1Q96P44 ZNF619P1-201ENST00000446539 752 ntBASIC5.6□□□□□ -1.51
COL21A1Q96P44 RN7SL170P-201ENST00000487098 295 ntBASIC5.6□□□□□ -1.51
COL21A1Q96P44 AC083795.1-201ENST00000491760 320 ntBASIC5.6□□□□□ -1.51
COL21A1Q96P44 ZCCHC10-203ENST00000504170 325 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
COL21A1Q96P44 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC5.6□□□□□ -1.51
COL21A1Q96P44 AC022441.2-201ENST00000514113 382 ntTSL 3 BASIC5.6□□□□□ -1.51
COL21A1Q96P44 RN7SKP288-201ENST00000516227 268 ntBASIC5.6□□□□□ -1.51
COL21A1Q96P44 RN7SKP35-201ENST00000517210 151 ntBASIC5.6□□□□□ -1.51
COL21A1Q96P44 C3orf14-207ENST00000542214 768 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
COL21A1Q96P44 MED21-206ENST00000546323 575 ntTSL 3 BASIC5.6□□□□□ -1.51
COL21A1Q96P44 AL135838.1-201ENST00000556080 235 ntTSL 3 BASIC5.6□□□□□ -1.51
COL21A1Q96P44 AC107958.1-201ENST00000556576 290 ntBASIC5.6□□□□□ -1.51
COL21A1Q96P44 LINC02310-201ENST00000556762 572 ntTSL 4 BASIC5.6□□□□□ -1.51
COL21A1Q96P44 STARD6-202ENST00000577499 696 ntTSL 2 BASIC5.6□□□□□ -1.51
COL21A1Q96P44 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC5.6□□□□□ -1.51
COL21A1Q96P44 AC090227.1-201ENST00000590532 936 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
COL21A1Q96P44 AC119403.2-201ENST00000590960 598 ntBASIC5.6□□□□□ -1.51
COL21A1Q96P44 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC5.6□□□□□ -1.51
COL21A1Q96P44 AL034374.2-201ENST00000605281 548 ntBASIC5.6□□□□□ -1.51
COL21A1Q96P44 AP001437.1-201ENST00000608783 456 ntBASIC5.6□□□□□ -1.51
COL21A1Q96P44 AC104836.2-201ENST00000609675 1293 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
COL21A1Q96P44 AL589745.2-201ENST00000616366 555 ntTSL 4 BASIC5.6□□□□□ -1.51
COL21A1Q96P44 AC096861.1-201ENST00000616652 240 ntBASIC5.6□□□□□ -1.51
COL21A1Q96P44 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
COL21A1Q96P44 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC5.6□□□□□ -1.51
COL21A1Q96P44 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC5.6□□□□□ -1.51
COL21A1Q96P44 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
COL21A1Q96P44 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
COL21A1Q96P44 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC5.6□□□□□ -1.51
COL21A1Q96P44 GJA9-202ENST00000360786 1901 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
COL21A1Q96P44 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
COL21A1Q96P44 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC5.59□□□□□ -1.51
COL21A1Q96P44 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
COL21A1Q96P44 THAP12P9-201ENST00000503971 2360 ntBASIC5.59□□□□□ -1.51
COL21A1Q96P44 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC5.59□□□□□ -1.51
COL21A1Q96P44 AMN1-208ENST00000537562 1538 ntTSL 5 BASIC5.59□□□□□ -1.51
COL21A1Q96P44 RBMY1HP-201ENST00000382759 1389 ntBASIC5.59□□□□□ -1.51
COL21A1Q96P44 ATP6V1A-201ENST00000273398 4591 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
COL21A1Q96P44 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
COL21A1Q96P44 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
COL21A1Q96P44 MIR133A2-201ENST00000347538 102 ntBASIC5.59□□□□□ -1.51
COL21A1Q96P44 AC107977.1-201ENST00000355745 939 ntBASIC5.59□□□□□ -1.51
COL21A1Q96P44 U3.10-201ENST00000364459 214 ntBASIC5.59□□□□□ -1.51
COL21A1Q96P44 TPT1-204ENST00000379060 764 ntTSL 5 BASIC5.59□□□□□ -1.51
COL21A1Q96P44 SNORA51.9-201ENST00000384295 124 ntBASIC5.59□□□□□ -1.51
COL21A1Q96P44 RAB5CP1-201ENST00000395972 580 ntBASIC5.59□□□□□ -1.51
COL21A1Q96P44 VN1R12P-201ENST00000403778 876 ntBASIC5.59□□□□□ -1.51
COL21A1Q96P44 MYL6P5-201ENST00000412707 459 ntBASIC5.59□□□□□ -1.51
COL21A1Q96P44 AC245096.1-201ENST00000413104 546 ntBASIC5.59□□□□□ -1.51
COL21A1Q96P44 AL354766.1-201ENST00000423396 542 ntBASIC5.59□□□□□ -1.51
COL21A1Q96P44 BX276092.6-201ENST00000430476 250 ntBASIC5.59□□□□□ -1.51
COL21A1Q96P44 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC5.59□□□□□ -1.51
COL21A1Q96P44 AL359636.1-201ENST00000433572 522 ntTSL 3 BASIC5.59□□□□□ -1.51
COL21A1Q96P44 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC5.59□□□□□ -1.51
COL21A1Q96P44 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC5.59□□□□□ -1.51
COL21A1Q96P44 AC016027.4-201ENST00000450866 277 ntBASIC5.59□□□□□ -1.51
COL21A1Q96P44 BX276092.8-201ENST00000455722 250 ntBASIC5.59□□□□□ -1.51
COL21A1Q96P44 AC068196.1-201ENST00000456895 833 ntTSL 3 BASIC5.59□□□□□ -1.51
COL21A1Q96P44 AC098847.1-201ENST00000473094 348 ntBASIC5.59□□□□□ -1.51
COL21A1Q96P44 AC116634.1-201ENST00000506926 447 ntTSL 5 BASIC5.59□□□□□ -1.51
COL21A1Q96P44 AC008957.1-202ENST00000512329 681 ntTSL 3 BASIC5.59□□□□□ -1.51
COL21A1Q96P44 HAND2-AS1-233ENST00000515345 797 ntTSL 3 BASIC5.59□□□□□ -1.51
COL21A1Q96P44 FAU-203ENST00000525297 355 ntTSL 5 BASIC5.59□□□□□ -1.51
COL21A1Q96P44 AP003031.2-204ENST00000527219 567 ntTSL 4 BASIC5.59□□□□□ -1.51
COL21A1Q96P44 ALG9-IT1-201ENST00000531305 684 ntTSL 3 BASIC5.59□□□□□ -1.51
COL21A1Q96P44 LRTOMT-215ENST00000538478 814 ntTSL 2 BASIC5.59□□□□□ -1.51
COL21A1Q96P44 AL671883.2-201ENST00000539514 536 ntTSL 4 BASIC5.59□□□□□ -1.51
COL21A1Q96P44 AC093524.1-201ENST00000564266 1094 ntBASIC5.59□□□□□ -1.51
COL21A1Q96P44 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC5.59□□□□□ -1.51
COL21A1Q96P44 LINC00907-202ENST00000585639 915 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
COL21A1Q96P44 ZNF235-204ENST00000589799 955 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
COL21A1Q96P44 LINC01198-204ENST00000594153 552 ntTSL 3 BASIC5.59□□□□□ -1.51
COL21A1Q96P44 Z98949.1-228ENST00000595093 798 ntTSL 5 BASIC5.59□□□□□ -1.51
COL21A1Q96P44 AC010271.1-201ENST00000599050 558 ntTSL 4 BASIC5.59□□□□□ -1.51
COL21A1Q96P44 AC092266.1-201ENST00000610958 165 ntBASIC5.59□□□□□ -1.51
COL21A1Q96P44 Metazoa_SRP.38-201ENST00000615981 254 ntBASIC5.59□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 89.1 ms