Protein–RNA interactions for Protein: Q96JG6

VPS50, Syndetin, humanhuman

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50Q96JG6 MTATP6P9-201ENST00000515039 680 ntBASIC6.22□□□□□ -1.41
VPS50Q96JG6 ATP6V0E1-202ENST00000517669 502 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
VPS50Q96JG6 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC6.22□□□□□ -1.41
VPS50Q96JG6 AC022973.4-201ENST00000524100 917 ntTSL 2 BASIC6.22□□□□□ -1.41
VPS50Q96JG6 OPCML-IT2-201ENST00000533260 398 ntTSL 4 BASIC6.22□□□□□ -1.41
VPS50Q96JG6 KLRK1-204ENST00000540818 951 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
VPS50Q96JG6 LINC00944-204ENST00000544499 366 ntTSL 5 BASIC6.22□□□□□ -1.41
VPS50Q96JG6 AC074029.2-201ENST00000551045 634 ntBASIC6.22□□□□□ -1.41
VPS50Q96JG6 AC107958.1-201ENST00000556576 290 ntBASIC6.22□□□□□ -1.41
VPS50Q96JG6 AL157871.4-201ENST00000557226 385 ntTSL 2 BASIC6.22□□□□□ -1.41
VPS50Q96JG6 AC023968.1-201ENST00000560719 475 ntBASIC6.22□□□□□ -1.41
VPS50Q96JG6 AC106785.4-201ENST00000569492 412 ntBASIC6.22□□□□□ -1.41
VPS50Q96JG6 AC010547.7-201ENST00000570323 333 ntBASIC6.22□□□□□ -1.41
VPS50Q96JG6 AC027281.1-201ENST00000574178 758 ntBASIC6.22□□□□□ -1.41
VPS50Q96JG6 AC015911.5-201ENST00000587076 451 ntBASIC6.22□□□□□ -1.41
VPS50Q96JG6 RPL29P33-201ENST00000587474 316 ntBASIC6.22□□□□□ -1.41
VPS50Q96JG6 SNORA74.4-201ENST00000607595 199 ntBASIC6.22□□□□□ -1.41
VPS50Q96JG6 Metazoa_SRP.66-201ENST00000615609 282 ntBASIC6.22□□□□□ -1.41
VPS50Q96JG6 AL356752.1-201ENST00000615844 593 ntBASIC6.22□□□□□ -1.41
VPS50Q96JG6 AC015574.1-202ENST00000616588 456 ntTSL 5 BASIC6.22□□□□□ -1.41
VPS50Q96JG6 AC010872.1-201ENST00000624225 675 ntBASIC6.22□□□□□ -1.41
VPS50Q96JG6 AC087516.1-201ENST00000561236 2428 ntBASIC6.22□□□□□ -1.41
VPS50Q96JG6 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
VPS50Q96JG6 DEUP1-209ENST00000531792 1656 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
VPS50Q96JG6 GABRA3-204ENST00000535043 1697 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
VPS50Q96JG6 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC6.22□□□□□ -1.41
VPS50Q96JG6 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
VPS50Q96JG6 AC005480.1-202ENST00000555916 3548 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
VPS50Q96JG6 MEPE-209ENST00000560249 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
VPS50Q96JG6 ROR1-AS1-201ENST00000412349 1574 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
VPS50Q96JG6 LINC01415-201ENST00000587320 4071 ntTSL 2 BASIC6.22□□□□□ -1.41
VPS50Q96JG6 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC6.22□□□□□ -1.41
VPS50Q96JG6 CDC7-201ENST00000234626 3173 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
VPS50Q96JG6 EEF1A1P12-201ENST00000443590 1346 ntBASIC6.22□□□□□ -1.41
VPS50Q96JG6 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
VPS50Q96JG6 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC6.22□□□□□ -1.41
VPS50Q96JG6 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC6.22□□□□□ -1.41
VPS50Q96JG6 PLEKHA1-205ENST00000433307 3704 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
VPS50Q96JG6 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC6.21□□□□□ -1.41
VPS50Q96JG6 GPR1-209ENST00000612892 2565 ntAPPRIS P1 TSL 4 BASIC6.21□□□□□ -1.41
VPS50Q96JG6 AC005674.2-201ENST00000561486 3510 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
VPS50Q96JG6 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC6.21□□□□□ -1.41
VPS50Q96JG6 USP16-201ENST00000334352 3004 ntAPPRIS P3 TSL 5 BASIC6.21□□□□□ -1.41
VPS50Q96JG6 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC6.21□□□□□ -1.41
VPS50Q96JG6 KIF20A-205ENST00000508792 2935 ntTSL 2 BASIC6.21□□□□□ -1.42
VPS50Q96JG6 MIR421-201ENST00000365696 85 ntBASIC6.21□□□□□ -1.42
VPS50Q96JG6 PRR9-201ENST00000368744 1229 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
VPS50Q96JG6 FCGR1B-202ENST00000369383 570 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
VPS50Q96JG6 PPARG-204ENST00000397000 1122 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
VPS50Q96JG6 SERHL2-204ENST00000407614 521 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
VPS50Q96JG6 RN7SKP129-201ENST00000410288 299 ntBASIC6.21□□□□□ -1.42
VPS50Q96JG6 AL359092.1-201ENST00000417156 265 ntBASIC6.21□□□□□ -1.42
VPS50Q96JG6 AL121823.1-201ENST00000418369 741 ntTSL 3 BASIC6.21□□□□□ -1.42
VPS50Q96JG6 RPL7AP51-201ENST00000422016 760 ntBASIC6.21□□□□□ -1.42
VPS50Q96JG6 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC6.21□□□□□ -1.42
VPS50Q96JG6 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC6.21□□□□□ -1.42
VPS50Q96JG6 AC108727.2-201ENST00000512277 392 ntTSL 3 BASIC6.21□□□□□ -1.42
VPS50Q96JG6 SNORA74.1-201ENST00000516320 180 ntBASIC6.21□□□□□ -1.42
VPS50Q96JG6 LACTB2-AS1-203ENST00000518553 817 ntTSL 5 BASIC6.21□□□□□ -1.42
VPS50Q96JG6 BCAS2P1-201ENST00000528022 632 ntBASIC6.21□□□□□ -1.42
VPS50Q96JG6 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
VPS50Q96JG6 AC024145.1-201ENST00000535324 775 ntTSL 3 BASIC6.21□□□□□ -1.42
VPS50Q96JG6 AC084880.3-201ENST00000535921 541 ntTSL 4 BASIC6.21□□□□□ -1.42
VPS50Q96JG6 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC6.21□□□□□ -1.42
VPS50Q96JG6 AL158211.1-201ENST00000566763 763 ntBASIC6.21□□□□□ -1.42
VPS50Q96JG6 AP003774.2-201ENST00000569737 558 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
VPS50Q96JG6 MIR3154-201ENST00000577829 84 ntBASIC6.21□□□□□ -1.42
VPS50Q96JG6 RN7SL208P-201ENST00000577964 296 ntBASIC6.21□□□□□ -1.42
VPS50Q96JG6 AC011921.2-201ENST00000589465 152 ntBASIC6.21□□□□□ -1.42
VPS50Q96JG6 AC005828.7-201ENST00000607331 556 ntBASIC6.21□□□□□ -1.42
VPS50Q96JG6 AC017076.1-201ENST00000607613 578 ntBASIC6.21□□□□□ -1.42
VPS50Q96JG6 AC120053.1-201ENST00000607706 736 ntBASIC6.21□□□□□ -1.42
VPS50Q96JG6 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC6.21□□□□□ -1.42
VPS50Q96JG6 AC092902.3-201ENST00000610060 373 ntTSL 3 BASIC6.21□□□□□ -1.42
VPS50Q96JG6 Z99755.2-201ENST00000610215 364 ntTSL 3 BASIC6.21□□□□□ -1.42
VPS50Q96JG6 Metazoa_SRP.35-201ENST00000611402 288 ntBASIC6.21□□□□□ -1.42
VPS50Q96JG6 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC6.21□□□□□ -1.42
VPS50Q96JG6 AC089999.3-201ENST00000622440 577 ntBASIC6.21□□□□□ -1.42
VPS50Q96JG6 AC061999.1-201ENST00000624454 177 ntBASIC6.21□□□□□ -1.42
VPS50Q96JG6 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
VPS50Q96JG6 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
VPS50Q96JG6 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
VPS50Q96JG6 AL929601.4-201ENST00000613011 1341 ntBASIC6.21□□□□□ -1.42
VPS50Q96JG6 PPP1R11-206ENST00000376773 1640 ntTSL 3 BASIC6.21□□□□□ -1.42
VPS50Q96JG6 AC087565.3-202ENST00000642085 1603 ntBASIC6.21□□□□□ -1.42
VPS50Q96JG6 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
VPS50Q96JG6 RRN3P1-201ENST00000514813 3645 ntTSL 2 BASIC6.2□□□□□ -1.42
VPS50Q96JG6 DDX18P6-201ENST00000450119 1997 ntBASIC6.2□□□□□ -1.42
VPS50Q96JG6 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC6.2□□□□□ -1.42
VPS50Q96JG6 CCDC190-202ENST00000367911 1395 ntAPPRIS P2 TSL 3 BASIC6.2□□□□□ -1.42
VPS50Q96JG6 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
VPS50Q96JG6 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC6.2□□□□□ -1.42
VPS50Q96JG6 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC6.2□□□□□ -1.42
VPS50Q96JG6 C5orf64-203ENST00000505642 2970 ntTSL 2 BASIC6.2□□□□□ -1.42
VPS50Q96JG6 ADAL-201ENST00000389651 1559 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
VPS50Q96JG6 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
VPS50Q96JG6 RXFP2-201ENST00000298386 3319 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
VPS50Q96JG6 CASC8-203ENST00000502082 1420 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
VPS50Q96JG6 ZNF211-205ENST00000391703 2239 ntTSL 2 BASIC6.2□□□□□ -1.42
VPS50Q96JG6 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 88 ms