Protein–RNA interactions for Protein: Q92889

ERCC4, DNA repair endonuclease XPF, humanhuman

Predicted RBP Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4Q92889 SH3BGRL-201ENST00000373212 1923 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
ERCC4Q92889 AF121898.1-201ENST00000440763 1860 ntTSL 5 BASIC7.13□□□□□ -1.27
ERCC4Q92889 AC009220.2-201ENST00000489759 1751 ntBASIC7.13□□□□□ -1.27
ERCC4Q92889 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC7.13□□□□□ -1.27
ERCC4Q92889 GTF3C3-202ENST00000409364 1736 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
ERCC4Q92889 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
ERCC4Q92889 RNASE13-201ENST00000382951 1607 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
ERCC4Q92889 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC7.12□□□□□ -1.27
ERCC4Q92889 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC7.12□□□□□ -1.27
ERCC4Q92889 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
ERCC4Q92889 CAP1P2-201ENST00000417455 1409 ntBASIC7.12□□□□□ -1.27
ERCC4Q92889 AC005702.3-201ENST00000585345 1447 ntBASIC7.12□□□□□ -1.27
ERCC4Q92889 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC7.12□□□□□ -1.27
ERCC4Q92889 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
ERCC4Q92889 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
ERCC4Q92889 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
ERCC4Q92889 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
ERCC4Q92889 FBXW12-204ENST00000445170 1379 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
ERCC4Q92889 AC007255.1-201ENST00000450540 1376 ntTSL 3 BASIC7.12□□□□□ -1.27
ERCC4Q92889 LALBA-201ENST00000301046 728 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
ERCC4Q92889 OR4F17-201ENST00000318050 1054 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
ERCC4Q92889 OR4F5-201ENST00000335137 1054 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
ERCC4Q92889 ZNF28-201ENST00000339844 650 ntTSL 4 BASIC7.12□□□□□ -1.27
ERCC4Q92889 RNU6-792P-201ENST00000363490 107 ntBASIC7.12□□□□□ -1.27
ERCC4Q92889 AL353625.1-202ENST00000366273 571 ntBASIC7.12□□□□□ -1.27
ERCC4Q92889 AL024507.1-201ENST00000412741 274 ntBASIC7.12□□□□□ -1.27
ERCC4Q92889 AC007562.1-201ENST00000421819 517 ntBASIC7.12□□□□□ -1.27
ERCC4Q92889 AC083862.1-201ENST00000427378 1242 ntBASIC7.12□□□□□ -1.27
ERCC4Q92889 ZNF965P-201ENST00000432501 817 ntBASIC7.12□□□□□ -1.27
ERCC4Q92889 FBXW12-203ENST00000436231 1117 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
ERCC4Q92889 AL138767.3-201ENST00000438082 495 ntTSL 3 BASIC7.12□□□□□ -1.27
ERCC4Q92889 AC023274.2-201ENST00000445264 521 ntBASIC7.12□□□□□ -1.27
ERCC4Q92889 AL445307.1-201ENST00000446476 602 ntTSL 3 BASIC7.12□□□□□ -1.27
ERCC4Q92889 AC092164.1-201ENST00000452212 726 ntTSL 2 BASIC7.12□□□□□ -1.27
ERCC4Q92889 AKR1D1P1-201ENST00000457236 936 ntBASIC7.12□□□□□ -1.27
ERCC4Q92889 TNS3-209ENST00000458317 1156 ntTSL 5 BASIC7.12□□□□□ -1.27
ERCC4Q92889 TFP1-201ENST00000460564 572 ntTSL 4 BASIC7.12□□□□□ -1.27
ERCC4Q92889 RN7SL372P-201ENST00000461982 298 ntBASIC7.12□□□□□ -1.27
ERCC4Q92889 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC7.12□□□□□ -1.27
ERCC4Q92889 TFP1-203ENST00000490470 561 ntTSL 4 BASIC7.12□□□□□ -1.27
ERCC4Q92889 LINC02492-201ENST00000502952 564 ntTSL 5 BASIC7.12□□□□□ -1.27
ERCC4Q92889 NAMPTP2-201ENST00000505629 1115 ntBASIC7.12□□□□□ -1.27
ERCC4Q92889 AC131392.1-201ENST00000506490 633 ntBASIC7.12□□□□□ -1.27
ERCC4Q92889 AC139713.2-204ENST00000511042 342 ntTSL 5 BASIC7.12□□□□□ -1.27
ERCC4Q92889 MTCO3P27-201ENST00000514397 196 ntBASIC7.12□□□□□ -1.27
ERCC4Q92889 AC016550.3-201ENST00000515706 767 ntBASIC7.12□□□□□ -1.27
ERCC4Q92889 ATP6V0E1-202ENST00000517669 502 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
ERCC4Q92889 COX6B1P4-201ENST00000519826 484 ntBASIC7.12□□□□□ -1.27
ERCC4Q92889 AL133399.1-201ENST00000527476 298 ntBASIC7.12□□□□□ -1.27
ERCC4Q92889 EBF2-204ENST00000535548 1017 ntTSL 2 BASIC7.12□□□□□ -1.27
ERCC4Q92889 VBP1-203ENST00000535916 944 ntTSL 2 BASIC7.12□□□□□ -1.27
ERCC4Q92889 AC089984.3-201ENST00000552838 363 ntBASIC7.12□□□□□ -1.27
ERCC4Q92889 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC7.12□□□□□ -1.27
ERCC4Q92889 LINC00640-204ENST00000557295 708 ntTSL 5 BASIC7.12□□□□□ -1.27
ERCC4Q92889 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC7.12□□□□□ -1.27
ERCC4Q92889 AC010809.1-201ENST00000560268 562 ntTSL 3 BASIC7.12□□□□□ -1.27
ERCC4Q92889 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC7.12□□□□□ -1.27
ERCC4Q92889 AC106730.2-201ENST00000566641 540 ntBASIC7.12□□□□□ -1.27
ERCC4Q92889 AC010266.1-201ENST00000568962 442 ntTSL 5 BASIC7.12□□□□□ -1.27
ERCC4Q92889 AC027281.1-201ENST00000574178 758 ntBASIC7.12□□□□□ -1.27
ERCC4Q92889 AC027229.1-201ENST00000583887 253 ntBASIC7.12□□□□□ -1.27
ERCC4Q92889 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
ERCC4Q92889 AL445435.1-201ENST00000604232 665 ntBASIC7.12□□□□□ -1.27
ERCC4Q92889 AL021368.3-201ENST00000607119 578 ntBASIC7.12□□□□□ -1.27
ERCC4Q92889 ASNSD1-208ENST00000607690 535 ntTSL 2 BASIC7.12□□□□□ -1.27
ERCC4Q92889 ASNSD1-209ENST00000607829 581 ntTSL 2 BASIC7.12□□□□□ -1.27
ERCC4Q92889 U91328.4-201ENST00000608919 517 ntBASIC7.12□□□□□ -1.27
ERCC4Q92889 AC004477.3-201ENST00000614061 590 ntBASIC7.12□□□□□ -1.27
ERCC4Q92889 AC245389.2-201ENST00000616023 576 ntBASIC7.12□□□□□ -1.27
ERCC4Q92889 MIR6085-201ENST00000618314 110 ntBASIC7.12□□□□□ -1.27
ERCC4Q92889 AC242843.1-201ENST00000618702 573 ntBASIC7.12□□□□□ -1.27
ERCC4Q92889 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC7.12□□□□□ -1.27
ERCC4Q92889 MBD5-221ENST00000637159 902 ntTSL 5 BASIC7.12□□□□□ -1.27
ERCC4Q92889 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC7.12□□□□□ -1.27
ERCC4Q92889 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC7.12□□□□□ -1.27
ERCC4Q92889 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC7.12□□□□□ -1.27
ERCC4Q92889 ADCY10-205ENST00000545172 4966 ntTSL 2 BASIC7.12□□□□□ -1.27
ERCC4Q92889 AC087565.3-202ENST00000642085 1603 ntBASIC7.12□□□□□ -1.27
ERCC4Q92889 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC7.12□□□□□ -1.27
ERCC4Q92889 NBPF12-205ENST00000617614 4630 ntTSL 5 BASIC7.12□□□□□ -1.27
ERCC4Q92889 TXNRD1-212ENST00000526390 3808 ntTSL 5 BASIC7.11□□□□□ -1.27
ERCC4Q92889 NAT1-208ENST00000520546 1446 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
ERCC4Q92889 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC7.11□□□□□ -1.27
ERCC4Q92889 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC7.11□□□□□ -1.27
ERCC4Q92889 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
ERCC4Q92889 AC022164.1-201ENST00000568767 2673 ntBASIC7.11□□□□□ -1.27
ERCC4Q92889 LINC02318-201ENST00000553785 1334 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
ERCC4Q92889 AC004023.1-201ENST00000561473 1744 ntBASIC7.11□□□□□ -1.27
ERCC4Q92889 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC7.11□□□□□ -1.27
ERCC4Q92889 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
ERCC4Q92889 PSMA6-201ENST00000261479 1029 ntAPPRIS P2 TSL 1 (best) BASIC7.11□□□□□ -1.27
ERCC4Q92889 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
ERCC4Q92889 RN7SKP74-201ENST00000362849 309 ntBASIC7.11□□□□□ -1.27
ERCC4Q92889 SNORD115-48-201ENST00000364764 76 ntBASIC7.11□□□□□ -1.27
ERCC4Q92889 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
ERCC4Q92889 ATP5EP2-201ENST00000381026 385 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
ERCC4Q92889 MRPS6P2-201ENST00000381143 370 ntBASIC7.11□□□□□ -1.27
ERCC4Q92889 RFPL3S-201ENST00000382084 1117 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
ERCC4Q92889 CAV1-204ENST00000393470 598 ntTSL 4 BASIC7.11□□□□□ -1.27
ERCC4Q92889 SMARCE1P6-201ENST00000398372 1216 ntBASIC7.11□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 66.5 ms