Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 DEFA9P-201ENST00000433042 285 ntBASIC6.04□□□□□ -1.44
SHROOM3Q8TF72 AL606490.8-201ENST00000441624 319 ntBASIC6.04□□□□□ -1.44
SHROOM3Q8TF72 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC6.04□□□□□ -1.44
SHROOM3Q8TF72 AC105021.1-201ENST00000455347 590 ntTSL 3 BASIC6.04□□□□□ -1.44
SHROOM3Q8TF72 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC6.04□□□□□ -1.44
SHROOM3Q8TF72 RNU1-88P-201ENST00000459274 128 ntBASIC6.04□□□□□ -1.44
SHROOM3Q8TF72 RPS23P6-201ENST00000466136 431 ntBASIC6.04□□□□□ -1.44
SHROOM3Q8TF72 AC006499.3-201ENST00000506077 748 ntBASIC6.04□□□□□ -1.44
SHROOM3Q8TF72 AC108941.2-201ENST00000506796 716 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
SHROOM3Q8TF72 ULK4P1-201ENST00000564495 875 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
SHROOM3Q8TF72 RNU4ATAC-201ENST00000580972 127 ntBASIC6.04□□□□□ -1.44
SHROOM3Q8TF72 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC6.04□□□□□ -1.44
SHROOM3Q8TF72 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC6.04□□□□□ -1.44
SHROOM3Q8TF72 AL355974.3-201ENST00000617383 467 ntBASIC6.04□□□□□ -1.44
SHROOM3Q8TF72 UBA3-213ENST00000631029 123 ntTSL 5 BASIC6.04□□□□□ -1.44
SHROOM3Q8TF72 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC6.04□□□□□ -1.44
SHROOM3Q8TF72 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC6.04□□□□□ -1.44
SHROOM3Q8TF72 MFSD8-219ENST00000641228 2559 ntBASIC6.04□□□□□ -1.44
SHROOM3Q8TF72 LINC02097-201ENST00000419257 2063 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
SHROOM3Q8TF72 AC130304.1-201ENST00000622942 2385 ntBASIC6.04□□□□□ -1.44
SHROOM3Q8TF72 OR52I2-203ENST00000641896 6591 ntAPPRIS ALT2 BASIC6.04□□□□□ -1.44
SHROOM3Q8TF72 CACNA1E-204ENST00000367567 14757 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
SHROOM3Q8TF72 TRIM6-205ENST00000445329 2951 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
SHROOM3Q8TF72 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC6.04□□□□□ -1.44
SHROOM3Q8TF72 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
SHROOM3Q8TF72 AL359955.1-201ENST00000455242 3275 ntBASIC6.04□□□□□ -1.44
SHROOM3Q8TF72 ZNF630-202ENST00000409324 2455 ntAPPRIS P2 TSL 1 (best) BASIC6.04□□□□□ -1.44
SHROOM3Q8TF72 DICER1-202ENST00000393063 10220 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
SHROOM3Q8TF72 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC6.04□□□□□ -1.44
SHROOM3Q8TF72 SUCLG1-201ENST00000393868 1475 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
SHROOM3Q8TF72 ATP5A1P4-201ENST00000556888 1605 ntBASIC6.04□□□□□ -1.44
SHROOM3Q8TF72 SORCS1-209ENST00000612154 6862 ntTSL 5 BASIC6.04□□□□□ -1.44
SHROOM3Q8TF72 CAMSAP2-201ENST00000236925 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
SHROOM3Q8TF72 CCDC77-201ENST00000239830 2371 ntAPPRIS P3 TSL 2 BASIC6.04□□□□□ -1.44
SHROOM3Q8TF72 MTOR-202ENST00000376838 4017 ntTSL 2 BASIC6.04□□□□□ -1.44
SHROOM3Q8TF72 TMSB4XP2-201ENST00000335179 210 ntBASIC6.04□□□□□ -1.44
SHROOM3Q8TF72 AC090616.2-201ENST00000358484 431 ntTSL 3 BASIC6.04□□□□□ -1.44
SHROOM3Q8TF72 RNA5SP284-201ENST00000384547 118 ntBASIC6.04□□□□□ -1.44
SHROOM3Q8TF72 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC6.04□□□□□ -1.44
SHROOM3Q8TF72 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC6.04□□□□□ -1.44
SHROOM3Q8TF72 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC6.04□□□□□ -1.44
SHROOM3Q8TF72 MYO5BP2-201ENST00000449815 1277 ntBASIC6.04□□□□□ -1.44
SHROOM3Q8TF72 RPL12P39-201ENST00000455456 496 ntBASIC6.04□□□□□ -1.44
SHROOM3Q8TF72 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC6.04□□□□□ -1.44
SHROOM3Q8TF72 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC6.04□□□□□ -1.44
SHROOM3Q8TF72 OR4A6P-201ENST00000534364 970 ntBASIC6.04□□□□□ -1.44
SHROOM3Q8TF72 OTX2-203ENST00000554559 715 ntTSL 5 BASIC6.04□□□□□ -1.44
SHROOM3Q8TF72 AC006530.1-201ENST00000555980 571 ntBASIC6.04□□□□□ -1.44
SHROOM3Q8TF72 AC103808.4-201ENST00000577258 391 ntTSL 3 BASIC6.04□□□□□ -1.44
SHROOM3Q8TF72 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC6.04□□□□□ -1.44
SHROOM3Q8TF72 AL353729.2-201ENST00000605859 1249 ntBASIC6.04□□□□□ -1.44
SHROOM3Q8TF72 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
SHROOM3Q8TF72 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC6.04□□□□□ -1.44
SHROOM3Q8TF72 AL355377.1-201ENST00000621125 1653 ntBASIC6.03□□□□□ -1.44
SHROOM3Q8TF72 ZNF19-206ENST00000565100 2087 ntTSL 5 BASIC6.03□□□□□ -1.44
SHROOM3Q8TF72 AC009404.1-201ENST00000420330 3090 ntTSL 3 BASIC6.03□□□□□ -1.44
SHROOM3Q8TF72 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC6.03□□□□□ -1.44
SHROOM3Q8TF72 ZNF227-201ENST00000313040 3043 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
SHROOM3Q8TF72 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC6.03□□□□□ -1.44
SHROOM3Q8TF72 CCDC125-201ENST00000383374 2006 ntTSL 5 BASIC6.03□□□□□ -1.44
SHROOM3Q8TF72 LINC00102-201ENST00000445785 1340 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
SHROOM3Q8TF72 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
SHROOM3Q8TF72 BTRC-204ENST00000408038 5982 ntAPPRIS ALT1 TSL 1 (best) BASIC6.03□□□□□ -1.44
SHROOM3Q8TF72 UTP14C-201ENST00000521776 5529 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
SHROOM3Q8TF72 ING3-204ENST00000431467 1447 ntTSL 2 BASIC6.03□□□□□ -1.44
SHROOM3Q8TF72 LINC01268-201ENST00000434296 2755 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
SHROOM3Q8TF72 MED12L-206ENST00000474524 10744 ntAPPRIS P2 TSL 1 (best) BASIC6.03□□□□□ -1.44
SHROOM3Q8TF72 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC6.03□□□□□ -1.44
SHROOM3Q8TF72 RNU6-171P-201ENST00000384354 107 ntBASIC6.03□□□□□ -1.44
SHROOM3Q8TF72 PCBP2P1-201ENST00000437262 977 ntBASIC6.03□□□□□ -1.44
SHROOM3Q8TF72 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC6.03□□□□□ -1.44
SHROOM3Q8TF72 HCG14-201ENST00000444986 413 ntTSL 2 BASIC6.03□□□□□ -1.44
SHROOM3Q8TF72 AL590399.3-202ENST00000448491 495 ntTSL 5 BASIC6.03□□□□□ -1.44
SHROOM3Q8TF72 RPL32P33-201ENST00000487023 394 ntBASIC6.03□□□□□ -1.44
SHROOM3Q8TF72 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC6.03□□□□□ -1.44
SHROOM3Q8TF72 AC010230.1-201ENST00000514115 443 ntTSL 3 BASIC6.03□□□□□ -1.44
SHROOM3Q8TF72 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC6.03□□□□□ -1.44
SHROOM3Q8TF72 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC6.03□□□□□ -1.44
SHROOM3Q8TF72 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC6.03□□□□□ -1.44
SHROOM3Q8TF72 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC6.03□□□□□ -1.44
SHROOM3Q8TF72 AC108673.3-201ENST00000609183 335 ntBASIC6.03□□□□□ -1.44
SHROOM3Q8TF72 ATM-229ENST00000639953 587 ntTSL 5 BASIC6.03□□□□□ -1.44
SHROOM3Q8TF72 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC6.03□□□□□ -1.44
SHROOM3Q8TF72 IL22RA2-203ENST00000349184 2801 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
SHROOM3Q8TF72 FGG-205ENST00000407946 1636 ntTSL 5 BASIC6.03□□□□□ -1.44
SHROOM3Q8TF72 RALYL-206ENST00000521376 1457 ntTSL 5 BASIC6.03□□□□□ -1.44
SHROOM3Q8TF72 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC6.03□□□□□ -1.44
SHROOM3Q8TF72 PBX1-221ENST00000612123 6062 ntTSL 5 BASIC6.03□□□□□ -1.44
SHROOM3Q8TF72 ALPK2-201ENST00000361673 7303 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
SHROOM3Q8TF72 APOOL-202ENST00000613473 6445 ntAPPRIS ALT1 TSL 5 BASIC6.03□□□□□ -1.44
SHROOM3Q8TF72 CADM2-202ENST00000405615 1314 ntAPPRIS P3 TSL 1 (best) BASIC6.03□□□□□ -1.44
SHROOM3Q8TF72 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC6.02□□□□□ -1.44
SHROOM3Q8TF72 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC6.02□□□□□ -1.45
SHROOM3Q8TF72 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC6.02□□□□□ -1.45
SHROOM3Q8TF72 OR10R3P-201ENST00000361688 942 ntBASIC6.02□□□□□ -1.45
SHROOM3Q8TF72 ERG-202ENST00000398897 4651 ntTSL 5 BASIC6.02□□□□□ -1.45
SHROOM3Q8TF72 MIR1203-201ENST00000408812 85 ntBASIC6.02□□□□□ -1.45
SHROOM3Q8TF72 AL731534.1-201ENST00000434711 269 ntBASIC6.02□□□□□ -1.45
SHROOM3Q8TF72 AL445928.1-201ENST00000435545 222 ntBASIC6.02□□□□□ -1.45
SHROOM3Q8TF72 NENFP3-201ENST00000503735 313 ntBASIC6.02□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 126 ms