Protein–RNA interactions for Protein: Q8NFH5

NUP35, Nucleoporin NUP53, humanhuman

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP35Q8NFH5 AC009283.1-201ENST00000615852 645 ntBASIC4.35□□□□□ -1.71
NUP35Q8NFH5 OXSM-209ENST00000626005 309 ntTSL 3 BASIC4.35□□□□□ -1.71
NUP35Q8NFH5 PSMD10P2-203ENST00000627340 914 ntTSL 5 BASIC4.35□□□□□ -1.71
NUP35Q8NFH5 FRG1EP-201ENST00000634469 770 ntBASIC4.35□□□□□ -1.71
NUP35Q8NFH5 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC4.35□□□□□ -1.71
NUP35Q8NFH5 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
NUP35Q8NFH5 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
NUP35Q8NFH5 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
NUP35Q8NFH5 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC4.35□□□□□ -1.71
NUP35Q8NFH5 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
NUP35Q8NFH5 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC4.35□□□□□ -1.71
NUP35Q8NFH5 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
NUP35Q8NFH5 USP40-202ENST00000409945 1946 ntTSL 2 BASIC4.34□□□□□ -1.71
NUP35Q8NFH5 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC4.34□□□□□ -1.71
NUP35Q8NFH5 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC4.34□□□□□ -1.71
NUP35Q8NFH5 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
NUP35Q8NFH5 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC4.34□□□□□ -1.71
NUP35Q8NFH5 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC4.34□□□□□ -1.71
NUP35Q8NFH5 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
NUP35Q8NFH5 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC4.34□□□□□ -1.71
NUP35Q8NFH5 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
NUP35Q8NFH5 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC4.34□□□□□ -1.71
NUP35Q8NFH5 IMPA1-202ENST00000311489 1106 ntTSL 2 BASIC4.34□□□□□ -1.71
NUP35Q8NFH5 NAP1L4P1-201ENST00000319092 1157 ntBASIC4.34□□□□□ -1.71
NUP35Q8NFH5 RNU1-146P-201ENST00000364015 165 ntBASIC4.34□□□□□ -1.71
NUP35Q8NFH5 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
NUP35Q8NFH5 U3.28-201ENST00000391249 210 ntBASIC4.34□□□□□ -1.71
NUP35Q8NFH5 SDHC-203ENST00000392169 369 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
NUP35Q8NFH5 AC019178.1-201ENST00000392337 440 ntBASIC4.34□□□□□ -1.71
NUP35Q8NFH5 RN7SKP117-201ENST00000410175 264 ntBASIC4.34□□□□□ -1.71
NUP35Q8NFH5 AL096829.1-201ENST00000413677 457 ntBASIC4.34□□□□□ -1.71
NUP35Q8NFH5 RPS14P4-201ENST00000415880 418 ntBASIC4.34□□□□□ -1.71
NUP35Q8NFH5 AL161742.1-201ENST00000418154 584 ntBASIC4.34□□□□□ -1.71
NUP35Q8NFH5 AC099677.3-201ENST00000427081 395 ntBASIC4.34□□□□□ -1.71
NUP35Q8NFH5 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC4.34□□□□□ -1.71
NUP35Q8NFH5 RPS7P4-201ENST00000444127 582 ntBASIC4.34□□□□□ -1.71
NUP35Q8NFH5 LINC02210-201ENST00000444561 288 ntBASIC4.34□□□□□ -1.71
NUP35Q8NFH5 AC019186.1-201ENST00000447019 545 ntTSL 3 BASIC4.34□□□□□ -1.71
NUP35Q8NFH5 HIGD1AP16-201ENST00000450986 258 ntBASIC4.34□□□□□ -1.71
NUP35Q8NFH5 RNU1-88P-201ENST00000459274 128 ntBASIC4.34□□□□□ -1.71
NUP35Q8NFH5 SNORD125-201ENST00000459538 96 ntBASIC4.34□□□□□ -1.71
NUP35Q8NFH5 RPS10P28-201ENST00000480396 498 ntBASIC4.34□□□□□ -1.71
NUP35Q8NFH5 AC010655.2-201ENST00000493710 662 ntTSL 3 BASIC4.34□□□□□ -1.71
NUP35Q8NFH5 ENSA-211ENST00000503345 793 ntTSL 3 BASIC4.34□□□□□ -1.71
NUP35Q8NFH5 SPINK13-202ENST00000511106 661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
NUP35Q8NFH5 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC4.34□□□□□ -1.71
NUP35Q8NFH5 AC114940.1-201ENST00000512162 1265 ntBASIC4.34□□□□□ -1.71
NUP35Q8NFH5 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC4.34□□□□□ -1.71
NUP35Q8NFH5 AC008055.1-201ENST00000547032 609 ntBASIC4.34□□□□□ -1.71
NUP35Q8NFH5 TMEM106C-215ENST00000550552 776 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
NUP35Q8NFH5 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC4.34□□□□□ -1.71
NUP35Q8NFH5 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC4.34□□□□□ -1.71
NUP35Q8NFH5 AC040918.1-201ENST00000560056 632 ntTSL 2 BASIC4.34□□□□□ -1.71
NUP35Q8NFH5 AC021483.1-201ENST00000560760 539 ntTSL 3 BASIC4.34□□□□□ -1.71
NUP35Q8NFH5 AC136285.2-201ENST00000562873 378 ntTSL 3 BASIC4.34□□□□□ -1.71
NUP35Q8NFH5 AC135050.4-201ENST00000568708 504 ntTSL 5 BASIC4.34□□□□□ -1.71
NUP35Q8NFH5 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC4.34□□□□□ -1.71
NUP35Q8NFH5 RN7SL426P-201ENST00000579106 295 ntBASIC4.34□□□□□ -1.71
NUP35Q8NFH5 AC012254.2-203ENST00000588705 561 ntAPPRIS P5 TSL 2 BASIC4.34□□□□□ -1.71
NUP35Q8NFH5 AC011483.2-201ENST00000594512 536 ntTSL 4 BASIC4.34□□□□□ -1.71
NUP35Q8NFH5 AL353807.4-201ENST00000604995 257 ntBASIC4.34□□□□□ -1.71
NUP35Q8NFH5 AL669942.1-206ENST00000610473 783 ntTSL 3 BASIC4.34□□□□□ -1.71
NUP35Q8NFH5 MIR6736-201ENST00000616799 59 ntBASIC4.34□□□□□ -1.71
NUP35Q8NFH5 AC103564.3-201ENST00000621194 220 ntBASIC4.34□□□□□ -1.71
NUP35Q8NFH5 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
NUP35Q8NFH5 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC4.34□□□□□ -1.71
NUP35Q8NFH5 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC4.34□□□□□ -1.71
NUP35Q8NFH5 AC093849.1-201ENST00000563631 2209 ntBASIC4.34□□□□□ -1.72
NUP35Q8NFH5 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.72
NUP35Q8NFH5 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC4.34□□□□□ -1.72
NUP35Q8NFH5 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
NUP35Q8NFH5 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
NUP35Q8NFH5 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC4.33□□□□□ -1.72
NUP35Q8NFH5 AC119674.1-202ENST00000641333 1860 ntBASIC4.33□□□□□ -1.72
NUP35Q8NFH5 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
NUP35Q8NFH5 AC011503.1-201ENST00000596326 1585 ntTSL 2 BASIC4.33□□□□□ -1.72
NUP35Q8NFH5 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC4.33□□□□□ -1.72
NUP35Q8NFH5 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
NUP35Q8NFH5 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC4.33□□□□□ -1.72
NUP35Q8NFH5 C11orf1-203ENST00000529270 1437 ntTSL 2 BASIC4.33□□□□□ -1.72
NUP35Q8NFH5 RUNX1T1-234ENST00000521553 1346 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
NUP35Q8NFH5 CEACAM1-213ENST00000599389 1342 ntTSL 5 BASIC4.33□□□□□ -1.72
NUP35Q8NFH5 AP004607.3-201ENST00000530354 3915 ntBASIC4.33□□□□□ -1.72
NUP35Q8NFH5 OR8H3-201ENST00000313472 939 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
NUP35Q8NFH5 OR4F21-201ENST00000320901 995 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
NUP35Q8NFH5 OR1D2-201ENST00000331459 939 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
NUP35Q8NFH5 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC4.33□□□□□ -1.72
NUP35Q8NFH5 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC4.33□□□□□ -1.72
NUP35Q8NFH5 OR51B4-201ENST00000380224 933 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
NUP35Q8NFH5 TRAV35-201ENST00000390462 330 ntBASIC4.33□□□□□ -1.72
NUP35Q8NFH5 AL139100.1-201ENST00000408001 498 ntBASIC4.33□□□□□ -1.72
NUP35Q8NFH5 DHFRP2-201ENST00000414224 547 ntBASIC4.33□□□□□ -1.72
NUP35Q8NFH5 AC078883.1-203ENST00000416080 654 ntTSL 3 BASIC4.33□□□□□ -1.72
NUP35Q8NFH5 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC4.33□□□□□ -1.72
NUP35Q8NFH5 AC108051.1-201ENST00000435291 549 ntTSL 3 BASIC4.33□□□□□ -1.72
NUP35Q8NFH5 TCEA1P3-201ENST00000443005 880 ntBASIC4.33□□□□□ -1.72
NUP35Q8NFH5 AC010240.2-201ENST00000445363 1205 ntBASIC4.33□□□□□ -1.72
NUP35Q8NFH5 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC4.33□□□□□ -1.72
NUP35Q8NFH5 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC4.33□□□□□ -1.72
NUP35Q8NFH5 AL133351.3-201ENST00000454998 193 ntBASIC4.33□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 69 ms