Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC8.95□□□□□ -0.98
VPS8Q8N3P4 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
VPS8Q8N3P4 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
VPS8Q8N3P4 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
VPS8Q8N3P4 TRRAP-201ENST00000355540 12590 ntAPPRIS P3 TSL 1 (best) BASIC8.94□□□□□ -0.98
VPS8Q8N3P4 AC140479.2-201ENST00000421567 3130 ntBASIC8.94□□□□□ -0.98
VPS8Q8N3P4 AP004607.3-201ENST00000530354 3915 ntBASIC8.94□□□□□ -0.98
VPS8Q8N3P4 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
VPS8Q8N3P4 AC114786.1-201ENST00000512892 1415 ntBASIC8.94□□□□□ -0.98
VPS8Q8N3P4 RIPK1-202ENST00000380409 3864 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
VPS8Q8N3P4 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
VPS8Q8N3P4 GAPDHP24-201ENST00000328713 983 ntBASIC8.94□□□□□ -0.98
VPS8Q8N3P4 VN1R21P-201ENST00000426703 765 ntBASIC8.94□□□□□ -0.98
VPS8Q8N3P4 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC8.94□□□□□ -0.98
VPS8Q8N3P4 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
VPS8Q8N3P4 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC8.94□□□□□ -0.98
VPS8Q8N3P4 LINC01456-201ENST00000453902 708 ntTSL 3 BASIC8.94□□□□□ -0.98
VPS8Q8N3P4 RPS23P2-201ENST00000463671 415 ntBASIC8.94□□□□□ -0.98
VPS8Q8N3P4 AC087672.1-201ENST00000479876 766 ntBASIC8.94□□□□□ -0.98
VPS8Q8N3P4 RN7SL466P-201ENST00000497546 295 ntBASIC8.94□□□□□ -0.98
VPS8Q8N3P4 RPS17P5-201ENST00000498293 408 ntBASIC8.94□□□□□ -0.98
VPS8Q8N3P4 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC8.94□□□□□ -0.98
VPS8Q8N3P4 AC104212.3-201ENST00000522044 444 ntTSL 3 BASIC8.94□□□□□ -0.98
VPS8Q8N3P4 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC8.94□□□□□ -0.98
VPS8Q8N3P4 AC022404.1-201ENST00000555320 273 ntBASIC8.94□□□□□ -0.98
VPS8Q8N3P4 AL035661.1-201ENST00000620459 1144 ntBASIC8.94□□□□□ -0.98
VPS8Q8N3P4 NEK11-201ENST00000356918 1874 ntAPPRIS ALT2 TSL 5 BASIC8.94□□□□□ -0.98
VPS8Q8N3P4 ZNF292-201ENST00000339907 8287 ntAPPRIS ALT1 TSL 5 BASIC8.94□□□□□ -0.98
VPS8Q8N3P4 AC083899.1-201ENST00000454465 3819 ntBASIC8.94□□□□□ -0.98
VPS8Q8N3P4 SLC12A6-201ENST00000290209 7286 ntAPPRIS P3 TSL 1 (best) BASIC8.94□□□□□ -0.98
VPS8Q8N3P4 GBA3-206ENST00000610628 2154 ntAPPRIS ALT2 TSL 5 BASIC8.93□□□□□ -0.98
VPS8Q8N3P4 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
VPS8Q8N3P4 MCM8-205ENST00000610722 7486 ntAPPRIS P4 TSL 1 (best) BASIC8.93□□□□□ -0.98
VPS8Q8N3P4 VPS53-204ENST00000437048 13106 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
VPS8Q8N3P4 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
VPS8Q8N3P4 OR2AT2P-201ENST00000413438 905 ntBASIC8.93□□□□□ -0.98
VPS8Q8N3P4 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC8.93□□□□□ -0.98
VPS8Q8N3P4 CRIP1P1-201ENST00000427567 185 ntBASIC8.93□□□□□ -0.98
VPS8Q8N3P4 OR6D1P-201ENST00000436165 939 ntBASIC8.93□□□□□ -0.98
VPS8Q8N3P4 BX679664.2-201ENST00000439282 283 ntBASIC8.93□□□□□ -0.98
VPS8Q8N3P4 CYCSP51-201ENST00000443545 318 ntBASIC8.93□□□□□ -0.98
VPS8Q8N3P4 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC8.93□□□□□ -0.98
VPS8Q8N3P4 GPRC5D-AS1-208ENST00000545914 566 ntTSL 3 BASIC8.93□□□□□ -0.98
VPS8Q8N3P4 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC8.93□□□□□ -0.98
VPS8Q8N3P4 AC137800.1-201ENST00000562976 573 ntTSL 4 BASIC8.93□□□□□ -0.98
VPS8Q8N3P4 MIR4505-201ENST00000582238 73 ntBASIC8.93□□□□□ -0.98
VPS8Q8N3P4 AC015574.1-205ENST00000611285 524 ntTSL 5 BASIC8.93□□□□□ -0.98
VPS8Q8N3P4 AL390318.1-201ENST00000624564 687 ntBASIC8.93□□□□□ -0.98
VPS8Q8N3P4 UGP2-232ENST00000640075 567 ntTSL 5 BASIC8.93□□□□□ -0.98
VPS8Q8N3P4 PBX1-221ENST00000612123 6062 ntTSL 5 BASIC8.93□□□□□ -0.98
VPS8Q8N3P4 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC8.93□□□□□ -0.98
VPS8Q8N3P4 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC8.92□□□□□ -0.98
VPS8Q8N3P4 LCP2-201ENST00000046794 4678 ntAPPRIS P2 TSL 1 (best) BASIC8.92□□□□□ -0.98
VPS8Q8N3P4 ELOC-201ENST00000284811 683 ntAPPRIS P1 TSL 3 BASIC8.92□□□□□ -0.98
VPS8Q8N3P4 CDC123-202ENST00000378900 933 ntTSL 5 BASIC8.92□□□□□ -0.98
VPS8Q8N3P4 AL133173.1-201ENST00000423458 397 ntBASIC8.92□□□□□ -0.98
VPS8Q8N3P4 AC016994.1-201ENST00000425419 552 ntTSL 4 BASIC8.92□□□□□ -0.98
VPS8Q8N3P4 RPL12P16-201ENST00000431098 498 ntBASIC8.92□□□□□ -0.98
VPS8Q8N3P4 LINC01780-202ENST00000457683 391 ntTSL 3 BASIC8.92□□□□□ -0.98
VPS8Q8N3P4 RPS7P6-201ENST00000485777 579 ntBASIC8.92□□□□□ -0.98
VPS8Q8N3P4 AC007370.1-201ENST00000503163 316 ntTSL 2 BASIC8.92□□□□□ -0.98
VPS8Q8N3P4 SNORA81.2-201ENST00000516868 170 ntBASIC8.92□□□□□ -0.98
VPS8Q8N3P4 MAL2-207ENST00000522828 603 ntTSL 3 BASIC8.92□□□□□ -0.98
VPS8Q8N3P4 MINCR-206ENST00000524335 499 ntTSL 2 BASIC8.92□□□□□ -0.98
VPS8Q8N3P4 ULK4P1-201ENST00000564495 875 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
VPS8Q8N3P4 ULK4P2-204ENST00000569682 798 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
VPS8Q8N3P4 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC8.92□□□□□ -0.98
VPS8Q8N3P4 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC8.92□□□□□ -0.98
VPS8Q8N3P4 AL118522.2-201ENST00000616045 615 ntBASIC8.92□□□□□ -0.98
VPS8Q8N3P4 AC007683.2-201ENST00000624681 714 ntBASIC8.92□□□□□ -0.98
VPS8Q8N3P4 SLF1-201ENST00000265140 5905 ntAPPRIS P1 TSL 2 BASIC8.92□□□□□ -0.98
VPS8Q8N3P4 UNC13B-209ENST00000635942 14550 ntAPPRIS ALT2 TSL 5 BASIC8.92□□□□□ -0.98
VPS8Q8N3P4 NOL4-203ENST00000538587 1979 ntTSL 2 BASIC8.92□□□□□ -0.98
VPS8Q8N3P4 ARFGEF3-201ENST00000251691 14877 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
VPS8Q8N3P4 MDM4-207ENST00000454264 9926 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
VPS8Q8N3P4 OR5A2-201ENST00000302040 6318 ntAPPRIS P1 BASIC8.92□□□□□ -0.98
VPS8Q8N3P4 CNOT1-216ENST00000569240 7660 ntAPPRIS ALT1 TSL 1 (best) BASIC8.92□□□□□ -0.98
VPS8Q8N3P4 MFAP3L-203ENST00000393704 5827 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
VPS8Q8N3P4 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC8.91□□□□□ -0.98
VPS8Q8N3P4 STK3-216ENST00000523601 3107 ntTSL 2 BASIC8.91□□□□□ -0.98
VPS8Q8N3P4 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC8.91□□□□□ -0.98
VPS8Q8N3P4 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
VPS8Q8N3P4 MIR323A-201ENST00000362199 86 ntBASIC8.91□□□□□ -0.98
VPS8Q8N3P4 RNA5SP326-201ENST00000363209 110 ntBASIC8.91□□□□□ -0.98
VPS8Q8N3P4 RN7SKP124-201ENST00000364730 341 ntBASIC8.91□□□□□ -0.98
VPS8Q8N3P4 MIR143-201ENST00000385300 106 ntBASIC8.91□□□□□ -0.98
VPS8Q8N3P4 PIGP-204ENST00000399102 688 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
VPS8Q8N3P4 EIF4A1P7-201ENST00000421800 1220 ntBASIC8.91□□□□□ -0.98
VPS8Q8N3P4 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC8.91□□□□□ -0.98
VPS8Q8N3P4 AL390119.1-201ENST00000440329 312 ntBASIC8.91□□□□□ -0.98
VPS8Q8N3P4 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC8.91□□□□□ -0.98
VPS8Q8N3P4 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC8.91□□□□□ -0.98
VPS8Q8N3P4 PDCL3P4-201ENST00000489621 720 ntBASIC8.91□□□□□ -0.98
VPS8Q8N3P4 ST13P12-201ENST00000508958 1094 ntBASIC8.91□□□□□ -0.98
VPS8Q8N3P4 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC8.91□□□□□ -0.98
VPS8Q8N3P4 AC103810.5-201ENST00000581622 560 ntTSL 5 BASIC8.91□□□□□ -0.98
VPS8Q8N3P4 AC012616.1-201ENST00000600294 197 ntBASIC8.91□□□□□ -0.98
VPS8Q8N3P4 AL513327.3-201ENST00000602618 469 ntBASIC8.91□□□□□ -0.98
VPS8Q8N3P4 FO393422.1-201ENST00000603908 708 ntBASIC8.91□□□□□ -0.98
VPS8Q8N3P4 AC090607.5-201ENST00000615692 224 ntBASIC8.91□□□□□ -0.98
Retrieved 100 of 98,524 protein–RNA pairs in 67.3 ms