Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 AC005033.1-201ENST00000428904 813 ntBASIC7.49□□□□□ -1.21
DEPDC4Q8N2C3 VDAC1P6-201ENST00000430062 855 ntBASIC7.49□□□□□ -1.21
DEPDC4Q8N2C3 CLUHP1-201ENST00000435012 1190 ntBASIC7.49□□□□□ -1.21
DEPDC4Q8N2C3 OR51R1P-201ENST00000435309 952 ntBASIC7.49□□□□□ -1.21
DEPDC4Q8N2C3 AC112493.1-202ENST00000436019 673 ntTSL 3 BASIC7.49□□□□□ -1.21
DEPDC4Q8N2C3 USP9YP8-201ENST00000441913 500 ntBASIC7.49□□□□□ -1.21
DEPDC4Q8N2C3 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
DEPDC4Q8N2C3 MGAT2P1-201ENST00000449718 797 ntBASIC7.49□□□□□ -1.21
DEPDC4Q8N2C3 AC016722.1-201ENST00000453936 652 ntTSL 5 BASIC7.49□□□□□ -1.21
DEPDC4Q8N2C3 RPL18AP17-201ENST00000455326 198 ntBASIC7.49□□□□□ -1.21
DEPDC4Q8N2C3 RN7SL107P-201ENST00000478127 283 ntBASIC7.49□□□□□ -1.21
DEPDC4Q8N2C3 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC7.49□□□□□ -1.21
DEPDC4Q8N2C3 AC008628.2-201ENST00000502605 298 ntBASIC7.49□□□□□ -1.21
DEPDC4Q8N2C3 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC7.49□□□□□ -1.21
DEPDC4Q8N2C3 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC7.49□□□□□ -1.21
DEPDC4Q8N2C3 AC108078.1-201ENST00000508073 725 ntBASIC7.49□□□□□ -1.21
DEPDC4Q8N2C3 RNU6-885P-201ENST00000516607 104 ntBASIC7.49□□□□□ -1.21
DEPDC4Q8N2C3 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC7.49□□□□□ -1.21
DEPDC4Q8N2C3 LINC01944-201ENST00000517916 416 ntTSL 3 BASIC7.49□□□□□ -1.21
DEPDC4Q8N2C3 IGKV2D-10-201ENST00000520194 281 ntBASIC7.49□□□□□ -1.21
DEPDC4Q8N2C3 AC090150.1-201ENST00000521408 585 ntTSL 4 BASIC7.49□□□□□ -1.21
DEPDC4Q8N2C3 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC7.49□□□□□ -1.21
DEPDC4Q8N2C3 AC019209.3-201ENST00000536949 772 ntTSL 3 BASIC7.49□□□□□ -1.21
DEPDC4Q8N2C3 RAB11AP2-201ENST00000545905 639 ntBASIC7.49□□□□□ -1.21
DEPDC4Q8N2C3 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC7.49□□□□□ -1.21
DEPDC4Q8N2C3 TRAV15-201ENST00000556680 249 ntBASIC7.49□□□□□ -1.21
DEPDC4Q8N2C3 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC7.49□□□□□ -1.21
DEPDC4Q8N2C3 AC061975.4-201ENST00000578466 776 ntTSL 3 BASIC7.49□□□□□ -1.21
DEPDC4Q8N2C3 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC7.49□□□□□ -1.21
DEPDC4Q8N2C3 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC7.49□□□□□ -1.21
DEPDC4Q8N2C3 DUXAP4-201ENST00000603046 613 ntBASIC7.49□□□□□ -1.21
DEPDC4Q8N2C3 TSHZ2-203ENST00000603338 3803 ntTSL 2 BASIC7.49□□□□□ -1.21
DEPDC4Q8N2C3 AC007262.1-201ENST00000604099 321 ntBASIC7.49□□□□□ -1.21
DEPDC4Q8N2C3 AC112187.2-201ENST00000604345 283 ntBASIC7.49□□□□□ -1.21
DEPDC4Q8N2C3 AC007038.2-201ENST00000608095 740 ntBASIC7.49□□□□□ -1.21
DEPDC4Q8N2C3 AC092681.3-201ENST00000609463 678 ntBASIC7.49□□□□□ -1.21
DEPDC4Q8N2C3 FRG2MP-201ENST00000613317 856 ntBASIC7.49□□□□□ -1.21
DEPDC4Q8N2C3 AP001506.1-201ENST00000615444 211 ntBASIC7.49□□□□□ -1.21
DEPDC4Q8N2C3 AC136475.10-201ENST00000620253 385 ntBASIC7.49□□□□□ -1.21
DEPDC4Q8N2C3 AL022318.4-202ENST00000622217 591 ntTSL 5 BASIC7.49□□□□□ -1.21
DEPDC4Q8N2C3 C2orf83-204ENST00000641422 291 ntAPPRIS ALT2 BASIC7.49□□□□□ -1.21
DEPDC4Q8N2C3 AC087885.1-201ENST00000641910 848 ntBASIC7.49□□□□□ -1.21
DEPDC4Q8N2C3 TPMT-201ENST00000309983 3181 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
DEPDC4Q8N2C3 PSG9-205ENST00000443718 1421 ntTSL 2 BASIC7.49□□□□□ -1.21
DEPDC4Q8N2C3 TDRKH-201ENST00000368822 3093 ntAPPRIS P2 TSL 5 BASIC7.49□□□□□ -1.21
DEPDC4Q8N2C3 MLLT3-203ENST00000380338 6772 ntAPPRIS P3 TSL 1 (best) BASIC7.49□□□□□ -1.21
DEPDC4Q8N2C3 RIF1-201ENST00000243326 15003 ntAPPRIS P3 TSL 1 (best) BASIC7.49□□□□□ -1.21
DEPDC4Q8N2C3 LRTOMT-210ENST00000447974 2007 ntTSL 2 BASIC7.49□□□□□ -1.21
DEPDC4Q8N2C3 RNASE9-209ENST00000557068 2703 ntAPPRIS P3 TSL 2 BASIC7.49□□□□□ -1.21
DEPDC4Q8N2C3 CD46-204ENST00000357714 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC7.49□□□□□ -1.21
DEPDC4Q8N2C3 METTL8-217ENST00000612742 8132 ntAPPRIS P1 TSL 2 BASIC7.49□□□□□ -1.21
DEPDC4Q8N2C3 SEM1-215ENST00000615352 2637 ntTSL 5 BASIC7.48□□□□□ -1.21
DEPDC4Q8N2C3 AL137918.1-201ENST00000624542 1922 ntBASIC7.48□□□□□ -1.21
DEPDC4Q8N2C3 RNASEL-201ENST00000367559 4238 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
DEPDC4Q8N2C3 AC092828.1-201ENST00000501211 5391 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
DEPDC4Q8N2C3 AC092111.1-201ENST00000618256 3358 ntBASIC7.48□□□□□ -1.21
DEPDC4Q8N2C3 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC7.48□□□□□ -1.21
DEPDC4Q8N2C3 NBPF26-204ENST00000615145 2656 ntTSL 5 BASIC7.48□□□□□ -1.21
DEPDC4Q8N2C3 EIF4B-201ENST00000262056 4148 ntAPPRIS P3 TSL 1 (best) BASIC7.48□□□□□ -1.21
DEPDC4Q8N2C3 AC138627.1-203ENST00000641872 1680 ntBASIC7.48□□□□□ -1.21
DEPDC4Q8N2C3 PHLDB2-201ENST00000393923 5673 ntTSL 2 BASIC7.48□□□□□ -1.21
DEPDC4Q8N2C3 KIAA1210-201ENST00000402510 7824 ntAPPRIS P1 TSL 5 BASIC7.48□□□□□ -1.21
DEPDC4Q8N2C3 FO393411.1-201ENST00000325612 420 ntBASIC7.48□□□□□ -1.21
DEPDC4Q8N2C3 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC7.48□□□□□ -1.21
DEPDC4Q8N2C3 DPH5-201ENST00000342173 1143 ntAPPRIS ALT1 TSL 1 (best) BASIC7.48□□□□□ -1.21
DEPDC4Q8N2C3 IGSF11-201ENST00000354673 3206 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
DEPDC4Q8N2C3 Metazoa_SRP.2-201ENST00000359385 269 ntBASIC7.48□□□□□ -1.21
DEPDC4Q8N2C3 RNU6-492P-201ENST00000363035 104 ntBASIC7.48□□□□□ -1.21
DEPDC4Q8N2C3 RNU6-216P-201ENST00000363282 104 ntBASIC7.48□□□□□ -1.21
DEPDC4Q8N2C3 STAMBPL1-201ENST00000371922 1899 ntTSL 2 BASIC7.48□□□□□ -1.21
DEPDC4Q8N2C3 ARR3-202ENST00000374495 1298 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
DEPDC4Q8N2C3 Y_RNA.402-201ENST00000383972 102 ntBASIC7.48□□□□□ -1.21
DEPDC4Q8N2C3 SNORA14B-201ENST00000384452 135 ntBASIC7.48□□□□□ -1.21
DEPDC4Q8N2C3 TRBV7-4-201ENST00000390369 347 ntAPPRIS P1 BASIC7.48□□□□□ -1.21
DEPDC4Q8N2C3 TRBV7-7-201ENST00000390377 347 ntAPPRIS P1 BASIC7.48□□□□□ -1.21
DEPDC4Q8N2C3 IGHV4-59-201ENST00000390629 495 ntAPPRIS P1 BASIC7.48□□□□□ -1.21
DEPDC4Q8N2C3 SEC61G-202ENST00000395535 459 ntAPPRIS P1 TSL 2 BASIC7.48□□□□□ -1.21
DEPDC4Q8N2C3 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC7.48□□□□□ -1.21
DEPDC4Q8N2C3 RPS24P12-201ENST00000402084 394 ntBASIC7.48□□□□□ -1.21
DEPDC4Q8N2C3 AL590143.1-201ENST00000405071 138 ntBASIC7.48□□□□□ -1.21
DEPDC4Q8N2C3 MIR1296-201ENST00000408136 92 ntBASIC7.48□□□□□ -1.21
DEPDC4Q8N2C3 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC7.48□□□□□ -1.21
DEPDC4Q8N2C3 HMGB1P11-201ENST00000413899 637 ntBASIC7.48□□□□□ -1.21
DEPDC4Q8N2C3 MYB-206ENST00000420123 1051 ntTSL 5 BASIC7.48□□□□□ -1.21
DEPDC4Q8N2C3 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC7.48□□□□□ -1.21
DEPDC4Q8N2C3 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC7.48□□□□□ -1.21
DEPDC4Q8N2C3 AL807761.3-201ENST00000427833 329 ntTSL 3 BASIC7.48□□□□□ -1.21
DEPDC4Q8N2C3 RPL7P56-201ENST00000429441 717 ntBASIC7.48□□□□□ -1.21
DEPDC4Q8N2C3 RPL7P4-203ENST00000430239 730 ntBASIC7.48□□□□□ -1.21
DEPDC4Q8N2C3 AL354761.1-201ENST00000434190 526 ntBASIC7.48□□□□□ -1.21
DEPDC4Q8N2C3 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC7.48□□□□□ -1.21
DEPDC4Q8N2C3 RPS10P3-201ENST00000439253 494 ntBASIC7.48□□□□□ -1.21
DEPDC4Q8N2C3 AP000474.1-201ENST00000441465 680 ntTSL 3 BASIC7.48□□□□□ -1.21
DEPDC4Q8N2C3 AC092809.1-201ENST00000441469 474 ntBASIC7.48□□□□□ -1.21
DEPDC4Q8N2C3 AC092431.2-201ENST00000441658 318 ntBASIC7.48□□□□□ -1.21
DEPDC4Q8N2C3 AP1B1P1-202ENST00000448124 191 ntBASIC7.48□□□□□ -1.21
DEPDC4Q8N2C3 NPM1P39-201ENST00000449818 867 ntBASIC7.48□□□□□ -1.21
DEPDC4Q8N2C3 CASK-AS1-201ENST00000451126 515 ntTSL 2 BASIC7.48□□□□□ -1.21
DEPDC4Q8N2C3 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC7.48□□□□□ -1.21
DEPDC4Q8N2C3 OR5S1P-201ENST00000453063 951 ntBASIC7.48□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 91.3 ms