Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 AC015849.5-201ENST00000604907 5473 ntTSL 2 BASIC7.58□□□□□ -1.2
NPAS4Q8IUM7 LINC01359-204ENST00000447748 2804 ntTSL 2 BASIC7.58□□□□□ -1.2
NPAS4Q8IUM7 CRNKL1-207ENST00000536226 4009 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
NPAS4Q8IUM7 SCIN-201ENST00000297029 9713 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
NPAS4Q8IUM7 SLFN12L-202ENST00000361112 2752 ntAPPRIS ALT2 TSL 5 BASIC7.58□□□□□ -1.2
NPAS4Q8IUM7 PTPN14-201ENST00000366956 12985 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
NPAS4Q8IUM7 BPIFC-203ENST00000397452 2091 ntAPPRIS P1 TSL 5 BASIC7.58□□□□□ -1.2
NPAS4Q8IUM7 ANGPT1-205ENST00000520052 1523 ntTSL 5 BASIC7.57□□□□□ -1.2
NPAS4Q8IUM7 UNC79-202ENST00000393151 7908 ntTSL 5 BASIC7.57□□□□□ -1.2
NPAS4Q8IUM7 NPIPB5-205ENST00000424340 3801 ntAPPRIS P2 TSL 1 (best) BASIC7.57□□□□□ -1.2
NPAS4Q8IUM7 ZMYND8-211ENST00000446994 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC7.57□□□□□ -1.2
NPAS4Q8IUM7 LYPD6B-202ENST00000409029 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC7.57□□□□□ -1.2
NPAS4Q8IUM7 ZNF736P9Y-201ENST00000439586 1345 ntBASIC7.57□□□□□ -1.2
NPAS4Q8IUM7 RGS22-215ENST00000523437 3975 ntAPPRIS ALT2 TSL 1 (best) BASIC7.57□□□□□ -1.2
NPAS4Q8IUM7 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC7.57□□□□□ -1.2
NPAS4Q8IUM7 AP002478.1-201ENST00000577848 1455 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
NPAS4Q8IUM7 NUP155-207ENST00000513532 4088 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
NPAS4Q8IUM7 AL137100.1-201ENST00000556703 1620 ntBASIC7.57□□□□□ -1.2
NPAS4Q8IUM7 EMX2OS-206ENST00000551288 7280 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
NPAS4Q8IUM7 AC009948.3-201ENST00000603415 1798 ntBASIC7.57□□□□□ -1.2
NPAS4Q8IUM7 OSBPL9-202ENST00000371714 3352 ntAPPRIS ALT1 TSL 2 BASIC7.57□□□□□ -1.2
NPAS4Q8IUM7 TMSB4XP2-201ENST00000335179 210 ntBASIC7.57□□□□□ -1.2
NPAS4Q8IUM7 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC7.57□□□□□ -1.2
NPAS4Q8IUM7 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC7.57□□□□□ -1.2
NPAS4Q8IUM7 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
NPAS4Q8IUM7 PLCG2-201ENST00000359376 3819 ntTSL 5 BASIC7.57□□□□□ -1.2
NPAS4Q8IUM7 RNU6-1339P-201ENST00000363574 91 ntBASIC7.57□□□□□ -1.2
NPAS4Q8IUM7 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC7.57□□□□□ -1.2
NPAS4Q8IUM7 SNORA70G-201ENST00000383923 142 ntBASIC7.57□□□□□ -1.2
NPAS4Q8IUM7 TAF9BP1-201ENST00000396646 746 ntBASIC7.57□□□□□ -1.2
NPAS4Q8IUM7 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC7.57□□□□□ -1.2
NPAS4Q8IUM7 ALDH7A1P4-201ENST00000412255 178 ntBASIC7.57□□□□□ -1.2
NPAS4Q8IUM7 CACYBPP1-201ENST00000438592 684 ntBASIC7.57□□□□□ -1.2
NPAS4Q8IUM7 MTCYBP34-201ENST00000439552 670 ntBASIC7.57□□□□□ -1.2
NPAS4Q8IUM7 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC7.57□□□□□ -1.2
NPAS4Q8IUM7 MTND5P2-201ENST00000442927 1142 ntBASIC7.57□□□□□ -1.2
NPAS4Q8IUM7 AC092601.1-201ENST00000444526 383 ntBASIC7.57□□□□□ -1.2
NPAS4Q8IUM7 SDHCP3-201ENST00000445371 506 ntBASIC7.57□□□□□ -1.2
NPAS4Q8IUM7 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC7.57□□□□□ -1.2
NPAS4Q8IUM7 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC7.57□□□□□ -1.2
NPAS4Q8IUM7 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC7.57□□□□□ -1.2
NPAS4Q8IUM7 AC136489.1-203ENST00000450246 736 ntTSL 5 BASIC7.57□□□□□ -1.2
NPAS4Q8IUM7 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC7.57□□□□□ -1.2
NPAS4Q8IUM7 RPS7P10-201ENST00000464254 603 ntBASIC7.57□□□□□ -1.2
NPAS4Q8IUM7 AC108734.3-201ENST00000481241 1165 ntBASIC7.57□□□□□ -1.2
NPAS4Q8IUM7 RPL29P23-201ENST00000486188 442 ntBASIC7.57□□□□□ -1.2
NPAS4Q8IUM7 RN7SL37P-201ENST00000490461 307 ntBASIC7.57□□□□□ -1.2
NPAS4Q8IUM7 RN7SL568P-201ENST00000493069 298 ntBASIC7.57□□□□□ -1.2
NPAS4Q8IUM7 AC022126.1-201ENST00000502995 593 ntTSL 4 BASIC7.57□□□□□ -1.2
NPAS4Q8IUM7 AC012560.1-203ENST00000510550 595 ntTSL 4 BASIC7.57□□□□□ -1.2
NPAS4Q8IUM7 AC008708.1-201ENST00000517346 474 ntTSL 3 BASIC7.57□□□□□ -1.2
NPAS4Q8IUM7 AC120036.3-201ENST00000517826 292 ntBASIC7.57□□□□□ -1.2
NPAS4Q8IUM7 AC104109.4-202ENST00000518409 1082 ntTSL 2 BASIC7.57□□□□□ -1.2
NPAS4Q8IUM7 PTK2-220ENST00000520151 573 ntTSL 4 BASIC7.57□□□□□ -1.2
NPAS4Q8IUM7 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC7.57□□□□□ -1.2
NPAS4Q8IUM7 AC108471.2-203ENST00000532680 517 ntTSL 5 BASIC7.57□□□□□ -1.2
NPAS4Q8IUM7 ELOCP32-201ENST00000548625 324 ntBASIC7.57□□□□□ -1.2
NPAS4Q8IUM7 GNG2-208ENST00000554875 430 ntTSL 5 BASIC7.57□□□□□ -1.2
NPAS4Q8IUM7 DEFB131E-202ENST00000602581 683 ntBASIC7.57□□□□□ -1.2
NPAS4Q8IUM7 AL031281.1-201ENST00000604049 488 ntBASIC7.57□□□□□ -1.2
NPAS4Q8IUM7 AL031601.1-201ENST00000605702 394 ntBASIC7.57□□□□□ -1.2
NPAS4Q8IUM7 AL513478.2-201ENST00000610400 988 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
NPAS4Q8IUM7 AL390037.1-201ENST00000610918 431 ntTSL 3 BASIC7.57□□□□□ -1.2
NPAS4Q8IUM7 5S_rRNA.23-201ENST00000612086 102 ntBASIC7.57□□□□□ -1.2
NPAS4Q8IUM7 AL158163.2-201ENST00000619110 700 ntBASIC7.57□□□□□ -1.2
NPAS4Q8IUM7 PPP3CB-AS1-215ENST00000620559 656 ntTSL 5 BASIC7.57□□□□□ -1.2
NPAS4Q8IUM7 AC022509.4-201ENST00000621404 572 ntBASIC7.57□□□□□ -1.2
NPAS4Q8IUM7 AC073530.2-201ENST00000623987 261 ntBASIC7.57□□□□□ -1.2
NPAS4Q8IUM7 AC005154.1-203ENST00000626245 451 ntTSL 5 BASIC7.57□□□□□ -1.2
NPAS4Q8IUM7 NEMP2-202ENST00000409150 6168 ntAPPRIS P1 TSL 2 BASIC7.57□□□□□ -1.2
NPAS4Q8IUM7 AL049737.1-201ENST00000413920 1403 ntBASIC7.57□□□□□ -1.2
NPAS4Q8IUM7 FANCD2P2-201ENST00000437591 1400 ntBASIC7.57□□□□□ -1.2
NPAS4Q8IUM7 DUXAP8-203ENST00000437781 2398 ntTSL 2 BASIC7.57□□□□□ -1.2
NPAS4Q8IUM7 AC005702.3-201ENST00000585345 1447 ntBASIC7.57□□□□□ -1.2
NPAS4Q8IUM7 LINC02535-201ENST00000455071 2513 ntTSL 2 BASIC7.57□□□□□ -1.2
NPAS4Q8IUM7 ZNF816-203ENST00000357666 2697 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
NPAS4Q8IUM7 KIAA0100-203ENST00000544884 6856 ntAPPRIS ALT2 TSL 1 (best) BASIC7.57□□□□□ -1.2
NPAS4Q8IUM7 IARS-206ENST00000447699 4186 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
NPAS4Q8IUM7 ARHGAP42P4-201ENST00000549782 2934 ntBASIC7.57□□□□□ -1.2
NPAS4Q8IUM7 PTPRT-211ENST00000618610 3230 ntTSL 5 BASIC7.57□□□□□ -1.2
NPAS4Q8IUM7 ZRANB1-201ENST00000359653 5695 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
NPAS4Q8IUM7 DDX46-201ENST00000354283 3821 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
NPAS4Q8IUM7 AC131649.2-201ENST00000624925 4439 ntBASIC7.57□□□□□ -1.2
NPAS4Q8IUM7 CCDC77-210ENST00000540180 1652 ntAPPRIS ALT2 TSL 2 BASIC7.57□□□□□ -1.2
NPAS4Q8IUM7 TMEM135-201ENST00000305494 2433 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
NPAS4Q8IUM7 PIK3AP1-203ENST00000371110 3151 ntTSL 2 BASIC7.57□□□□□ -1.2
NPAS4Q8IUM7 KDM4C-215ENST00000543771 3332 ntTSL 2 BASIC7.57□□□□□ -1.2
NPAS4Q8IUM7 CEP41-219ENST00000616628 3315 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
NPAS4Q8IUM7 ANK2-203ENST00000394537 6313 ntAPPRIS ALT2 TSL 1 (best) BASIC7.57□□□□□ -1.2
NPAS4Q8IUM7 ZC3H11B-201ENST00000367211 2994 ntAPPRIS P5 TSL 5 BASIC7.56□□□□□ -1.2
NPAS4Q8IUM7 AL391704.1-201ENST00000422206 2368 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
NPAS4Q8IUM7 MAVS-202ENST00000428216 11714 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
NPAS4Q8IUM7 CYSLTR2-202ENST00000614739 1908 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
NPAS4Q8IUM7 CDK15-201ENST00000260967 1635 ntAPPRIS P3 TSL 1 (best) BASIC7.56□□□□□ -1.2
NPAS4Q8IUM7 AC217777.1-201ENST00000570034 1471 ntBASIC7.56□□□□□ -1.2
NPAS4Q8IUM7 PAPOLG-201ENST00000238714 4263 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
NPAS4Q8IUM7 IL23R-201ENST00000347310 2912 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
NPAS4Q8IUM7 TNRC6A-201ENST00000315183 8303 ntAPPRIS ALT2 TSL 5 BASIC7.56□□□□□ -1.2
NPAS4Q8IUM7 MAP4K4-203ENST00000347699 3792 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
NPAS4Q8IUM7 BCL2L14-203ENST00000308721 1897 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 99.1 ms