Protein–RNA interactions for Protein: Q86VP3

PACS2, Phosphofurin acidic cluster sorting protein 2, humanhuman

Predictions only

Length 889 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACS2Q86VP3 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC8.4□□□□□ -1.06
PACS2Q86VP3 SMG1P4-203ENST00000517529 1589 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
PACS2Q86VP3 AC007923.2-201ENST00000584218 1591 ntBASIC8.4□□□□□ -1.06
PACS2Q86VP3 HMGB1-203ENST00000341423 5485 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
PACS2Q86VP3 CSDE1-201ENST00000261443 3228 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
PACS2Q86VP3 AJ009632.1-201ENST00000433588 1376 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
PACS2Q86VP3 AC074198.1-201ENST00000506546 1397 ntBASIC8.4□□□□□ -1.06
PACS2Q86VP3 NIPA1-202ENST00000437912 7613 ntAPPRIS ALT2 TSL 1 (best) BASIC8.4□□□□□ -1.06
PACS2Q86VP3 MTF2-214ENST00000545708 4046 ntTSL 2 BASIC8.4□□□□□ -1.06
PACS2Q86VP3 GJA1-201ENST00000282561 3037 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
PACS2Q86VP3 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC8.4□□□□□ -1.06
PACS2Q86VP3 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC8.4□□□□□ -1.06
PACS2Q86VP3 RNA5SP452-201ENST00000363004 119 ntBASIC8.4□□□□□ -1.06
PACS2Q86VP3 RNU1-120P-201ENST00000363009 157 ntBASIC8.4□□□□□ -1.06
PACS2Q86VP3 LRMDA-201ENST00000372499 899 ntAPPRIS P3 TSL 1 (best) BASIC8.4□□□□□ -1.06
PACS2Q86VP3 SERPINB12-202ENST00000382768 1278 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
PACS2Q86VP3 SNORA32.2-201ENST00000384049 122 ntBASIC8.4□□□□□ -1.06
PACS2Q86VP3 RNU6-185P-201ENST00000384421 107 ntBASIC8.4□□□□□ -1.06
PACS2Q86VP3 MTND3P8-201ENST00000412909 339 ntBASIC8.4□□□□□ -1.06
PACS2Q86VP3 AC244157.1-201ENST00000415642 163 ntBASIC8.4□□□□□ -1.06
PACS2Q86VP3 AC092042.2-201ENST00000417304 331 ntBASIC8.4□□□□□ -1.06
PACS2Q86VP3 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC8.4□□□□□ -1.06
PACS2Q86VP3 AL645937.1-202ENST00000421799 937 ntBASIC8.4□□□□□ -1.06
PACS2Q86VP3 KLF7-IT1-201ENST00000428777 655 ntTSL 2 BASIC8.4□□□□□ -1.06
PACS2Q86VP3 RPL31P35-201ENST00000431058 377 ntBASIC8.4□□□□□ -1.06
PACS2Q86VP3 AL592114.3-201ENST00000437919 446 ntTSL 3 BASIC8.4□□□□□ -1.06
PACS2Q86VP3 AL451164.3-201ENST00000441377 447 ntTSL 5 BASIC8.4□□□□□ -1.06
PACS2Q86VP3 AL133387.1-201ENST00000442188 382 ntTSL 3 BASIC8.4□□□□□ -1.06
PACS2Q86VP3 DEFA10P-201ENST00000455014 288 ntBASIC8.4□□□□□ -1.06
PACS2Q86VP3 AL445673.1-201ENST00000455124 416 ntTSL 3 BASIC8.4□□□□□ -1.06
PACS2Q86VP3 RN7SL706P-201ENST00000460079 292 ntBASIC8.4□□□□□ -1.06
PACS2Q86VP3 RN7SL870P-201ENST00000460111 296 ntBASIC8.4□□□□□ -1.06
PACS2Q86VP3 AC010457.1-202ENST00000510137 337 ntTSL 2 BASIC8.4□□□□□ -1.06
PACS2Q86VP3 Y_RNA.672-201ENST00000516289 104 ntBASIC8.4□□□□□ -1.06
PACS2Q86VP3 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC8.4□□□□□ -1.06
PACS2Q86VP3 AP001372.1-202ENST00000533008 344 ntTSL 3 BASIC8.4□□□□□ -1.06
PACS2Q86VP3 CACNA1C-AS2-201ENST00000545526 609 ntTSL 2 BASIC8.4□□□□□ -1.06
PACS2Q86VP3 LINC02314-201ENST00000555725 516 ntTSL 2 BASIC8.4□□□□□ -1.06
PACS2Q86VP3 DPPA3P2-202ENST00000557188 1219 ntBASIC8.4□□□□□ -1.06
PACS2Q86VP3 AC068714.1-201ENST00000559623 800 ntBASIC8.4□□□□□ -1.06
PACS2Q86VP3 AC037198.1-201ENST00000560769 281 ntTSL 3 BASIC8.4□□□□□ -1.06
PACS2Q86VP3 AC018558.5-201ENST00000565840 952 ntBASIC8.4□□□□□ -1.06
PACS2Q86VP3 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC8.4□□□□□ -1.06
PACS2Q86VP3 AC092142.1-202ENST00000567021 829 ntTSL 5 BASIC8.4□□□□□ -1.06
PACS2Q86VP3 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC8.4□□□□□ -1.06
PACS2Q86VP3 AC141257.3-201ENST00000572906 215 ntBASIC8.4□□□□□ -1.06
PACS2Q86VP3 THCAT158-201ENST00000575039 535 ntTSL 5 BASIC8.4□□□□□ -1.06
PACS2Q86VP3 AC003965.1-201ENST00000575693 667 ntTSL 3 BASIC8.4□□□□□ -1.06
PACS2Q86VP3 AP005328.1-202ENST00000580781 776 ntTSL 3 BASIC8.4□□□□□ -1.06
PACS2Q86VP3 AC096708.1-201ENST00000584419 658 ntBASIC8.4□□□□□ -1.06
PACS2Q86VP3 OR7E19P-202ENST00000589942 844 ntBASIC8.4□□□□□ -1.06
PACS2Q86VP3 LAMTOR5-AS1-207ENST00000590826 574 ntTSL 4 BASIC8.4□□□□□ -1.06
PACS2Q86VP3 RNF157-207ENST00000592271 755 ntTSL 2 BASIC8.4□□□□□ -1.06
PACS2Q86VP3 AC007663.4-201ENST00000608275 631 ntBASIC8.4□□□□□ -1.06
PACS2Q86VP3 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC8.4□□□□□ -1.06
PACS2Q86VP3 AC037198.3-201ENST00000616754 526 ntBASIC8.4□□□□□ -1.06
PACS2Q86VP3 OXSM-209ENST00000626005 309 ntTSL 3 BASIC8.4□□□□□ -1.06
PACS2Q86VP3 CASC19-212ENST00000641153 1287 ntBASIC8.4□□□□□ -1.06
PACS2Q86VP3 ZNF573-201ENST00000339503 2014 ntTSL 5 BASIC8.4□□□□□ -1.06
PACS2Q86VP3 PNN-201ENST00000216832 3576 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
PACS2Q86VP3 FNDC3A-206ENST00000541916 6328 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.07
PACS2Q86VP3 CTH-202ENST00000370938 1805 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.07
PACS2Q86VP3 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC8.4□□□□□ -1.07
PACS2Q86VP3 CLCN3-209ENST00000513761 6692 ntAPPRIS ALT1 TSL 1 (best) BASIC8.4□□□□□ -1.07
PACS2Q86VP3 ADD3-203ENST00000360162 3114 ntAPPRIS ALT1 TSL 1 (best) BASIC8.4□□□□□ -1.07
PACS2Q86VP3 CARD8-217ENST00000520753 3041 ntTSL 1 (best) BASIC8.4□□□□□ -1.07
PACS2Q86VP3 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC8.4□□□□□ -1.07
PACS2Q86VP3 LRRC2-AS1-201ENST00000599511 2291 ntBASIC8.4□□□□□ -1.07
PACS2Q86VP3 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC8.39□□□□□ -1.07
PACS2Q86VP3 XAF1-202ENST00000361842 3623 ntAPPRIS P4 TSL 1 (best) BASIC8.39□□□□□ -1.07
PACS2Q86VP3 ENTPD5-201ENST00000334696 5842 ntAPPRIS P1 TSL 5 BASIC8.39□□□□□ -1.07
PACS2Q86VP3 FBXL4-202ENST00000369244 8035 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
PACS2Q86VP3 EEF1A1P13-201ENST00000503537 1389 ntBASIC8.39□□□□□ -1.07
PACS2Q86VP3 SLC7A14-201ENST00000231706 10103 ntAPPRIS P1 TSL 2 BASIC8.39□□□□□ -1.07
PACS2Q86VP3 AC107982.1-201ENST00000507171 1300 ntBASIC8.39□□□□□ -1.07
PACS2Q86VP3 POGZ-203ENST00000368863 6054 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
PACS2Q86VP3 KCNK2-203ENST00000444842 3379 ntAPPRIS ALT1 TSL 1 (best) BASIC8.39□□□□□ -1.07
PACS2Q86VP3 OR51A10P-201ENST00000307165 937 ntBASIC8.39□□□□□ -1.07
PACS2Q86VP3 OR5J1P-201ENST00000313544 939 ntBASIC8.39□□□□□ -1.07
PACS2Q86VP3 OR10G7-201ENST00000330487 936 ntAPPRIS P1 BASIC8.39□□□□□ -1.07
PACS2Q86VP3 AC067945.1-201ENST00000342609 618 ntBASIC8.39□□□□□ -1.07
PACS2Q86VP3 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
PACS2Q86VP3 LCN1P1-201ENST00000372031 505 ntBASIC8.39□□□□□ -1.07
PACS2Q86VP3 RNU6-510P-201ENST00000391239 108 ntBASIC8.39□□□□□ -1.07
PACS2Q86VP3 RPL32P23-201ENST00000397237 405 ntBASIC8.39□□□□□ -1.07
PACS2Q86VP3 RN7SKP225-201ENST00000410405 352 ntBASIC8.39□□□□□ -1.07
PACS2Q86VP3 Y_RNA.618-201ENST00000410949 107 ntBASIC8.39□□□□□ -1.07
PACS2Q86VP3 SPA17P1-201ENST00000416656 452 ntBASIC8.39□□□□□ -1.07
PACS2Q86VP3 BPI-202ENST00000417318 1082 ntTSL 5 BASIC8.39□□□□□ -1.07
PACS2Q86VP3 AC016716.2-201ENST00000418621 486 ntTSL 3 BASIC8.39□□□□□ -1.07
PACS2Q86VP3 AP001062.2-201ENST00000426029 127 ntTSL 3 BASIC8.39□□□□□ -1.07
PACS2Q86VP3 LINC01363-201ENST00000426709 971 ntTSL 5 BASIC8.39□□□□□ -1.07
PACS2Q86VP3 NPM1P34-201ENST00000428821 893 ntBASIC8.39□□□□□ -1.07
PACS2Q86VP3 RPL7P56-201ENST00000429441 717 ntBASIC8.39□□□□□ -1.07
PACS2Q86VP3 CRIP1P4-201ENST00000442565 229 ntBASIC8.39□□□□□ -1.07
PACS2Q86VP3 AL122008.4-201ENST00000446433 388 ntTSL 3 BASIC8.39□□□□□ -1.07
PACS2Q86VP3 IFNA13-201ENST00000449498 634 ntAPPRIS ALT1 BASIC8.39□□□□□ -1.07
PACS2Q86VP3 NPM1P39-201ENST00000449818 867 ntBASIC8.39□□□□□ -1.07
PACS2Q86VP3 AL591438.2-201ENST00000452635 691 ntBASIC8.39□□□□□ -1.07
PACS2Q86VP3 RPSAP54-201ENST00000454001 886 ntBASIC8.39□□□□□ -1.07
Retrieved 100 of 98,524 protein–RNA pairs in 85 ms