Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 OXSM-209ENST00000626005 309 ntTSL 3 BASIC4.58□□□□□ -1.68
HIST1H1AQ02539 AC079776.5-201ENST00000641920 211 ntBASIC4.58□□□□□ -1.68
HIST1H1AQ02539 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
HIST1H1AQ02539 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC4.58□□□□□ -1.68
HIST1H1AQ02539 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC4.58□□□□□ -1.68
HIST1H1AQ02539 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC4.58□□□□□ -1.68
HIST1H1AQ02539 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC4.58□□□□□ -1.68
HIST1H1AQ02539 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
HIST1H1AQ02539 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
HIST1H1AQ02539 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
HIST1H1AQ02539 COPS4-209ENST00000511653 1695 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
HIST1H1AQ02539 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
HIST1H1AQ02539 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
HIST1H1AQ02539 AC002525.1-201ENST00000624392 1622 ntBASIC4.57□□□□□ -1.68
HIST1H1AQ02539 MAPK10-328ENST00000641553 4009 ntBASIC4.57□□□□□ -1.68
HIST1H1AQ02539 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC4.57□□□□□ -1.68
HIST1H1AQ02539 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
HIST1H1AQ02539 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
HIST1H1AQ02539 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC4.57□□□□□ -1.68
HIST1H1AQ02539 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
HIST1H1AQ02539 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
HIST1H1AQ02539 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
HIST1H1AQ02539 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
HIST1H1AQ02539 FHL5-201ENST00000326771 2031 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
HIST1H1AQ02539 AL138820.1-201ENST00000617901 5305 ntBASIC4.57□□□□□ -1.68
HIST1H1AQ02539 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC4.57□□□□□ -1.68
HIST1H1AQ02539 RN7SKP128-201ENST00000364270 303 ntBASIC4.57□□□□□ -1.68
HIST1H1AQ02539 PPARG-204ENST00000397000 1122 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
HIST1H1AQ02539 RNA5SP156-201ENST00000410250 110 ntBASIC4.57□□□□□ -1.68
HIST1H1AQ02539 AP006748.1-201ENST00000418874 346 ntTSL 3 BASIC4.57□□□□□ -1.68
HIST1H1AQ02539 PSMD10P2-201ENST00000432890 672 ntBASIC4.57□□□□□ -1.68
HIST1H1AQ02539 NPM1P18-201ENST00000434232 732 ntBASIC4.57□□□□□ -1.68
HIST1H1AQ02539 AL022324.2-201ENST00000434827 780 ntBASIC4.57□□□□□ -1.68
HIST1H1AQ02539 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC4.57□□□□□ -1.68
HIST1H1AQ02539 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC4.57□□□□□ -1.68
HIST1H1AQ02539 XXYLT1-AS2-202ENST00000447975 784 ntTSL 2 BASIC4.57□□□□□ -1.68
HIST1H1AQ02539 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC4.57□□□□□ -1.68
HIST1H1AQ02539 RARRES2P3-201ENST00000457739 473 ntBASIC4.57□□□□□ -1.68
HIST1H1AQ02539 RPS4XP12-201ENST00000461747 709 ntBASIC4.57□□□□□ -1.68
HIST1H1AQ02539 MRPS22-205ENST00000478464 1065 ntTSL 5 BASIC4.57□□□□□ -1.68
HIST1H1AQ02539 RPL23AP40-201ENST00000487630 390 ntBASIC4.57□□□□□ -1.68
HIST1H1AQ02539 AC025766.1-201ENST00000514061 409 ntTSL 5 BASIC4.57□□□□□ -1.68
HIST1H1AQ02539 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC4.57□□□□□ -1.68
HIST1H1AQ02539 AZIN1-AS1-208ENST00000519257 619 ntTSL 3 BASIC4.57□□□□□ -1.68
HIST1H1AQ02539 TPT1-AS1-207ENST00000520310 563 ntTSL 5 BASIC4.57□□□□□ -1.68
HIST1H1AQ02539 COX6C-205ENST00000520468 1098 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
HIST1H1AQ02539 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC4.57□□□□□ -1.68
HIST1H1AQ02539 AC069234.2-202ENST00000535720 583 ntTSL 5 BASIC4.57□□□□□ -1.68
HIST1H1AQ02539 BMS1P16-201ENST00000556075 1147 ntBASIC4.57□□□□□ -1.68
HIST1H1AQ02539 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC4.57□□□□□ -1.68
HIST1H1AQ02539 AC025809.1-201ENST00000585336 560 ntTSL 4 BASIC4.57□□□□□ -1.68
HIST1H1AQ02539 CT45A3-202ENST00000598716 855 ntAPPRIS P1 TSL 3 BASIC4.57□□□□□ -1.68
HIST1H1AQ02539 AL132655.1-201ENST00000601795 1153 ntTSL 3 BASIC4.57□□□□□ -1.68
HIST1H1AQ02539 AC012368.3-201ENST00000604190 219 ntBASIC4.57□□□□□ -1.68
HIST1H1AQ02539 AC022001.1-201ENST00000605193 268 ntBASIC4.57□□□□□ -1.68
HIST1H1AQ02539 AC004921.1-201ENST00000608884 733 ntTSL 5 BASIC4.57□□□□□ -1.68
HIST1H1AQ02539 RN7SL261P-201ENST00000613441 282 ntBASIC4.57□□□□□ -1.68
HIST1H1AQ02539 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC4.57□□□□□ -1.68
HIST1H1AQ02539 PSMD10P2-203ENST00000627340 914 ntTSL 5 BASIC4.57□□□□□ -1.68
HIST1H1AQ02539 AC007603.3-201ENST00000636915 979 ntBASIC4.57□□□□□ -1.68
HIST1H1AQ02539 AC134980.1-214ENST00000638815 687 ntTSL 5 BASIC4.57□□□□□ -1.68
HIST1H1AQ02539 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
HIST1H1AQ02539 LEPR-205ENST00000371060 5135 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
HIST1H1AQ02539 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
HIST1H1AQ02539 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
HIST1H1AQ02539 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
HIST1H1AQ02539 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC4.57□□□□□ -1.68
HIST1H1AQ02539 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
HIST1H1AQ02539 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
HIST1H1AQ02539 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC4.56□□□□□ -1.68
HIST1H1AQ02539 SUCLG1-201ENST00000393868 1475 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
HIST1H1AQ02539 AC016583.1-201ENST00000624221 2431 ntBASIC4.56□□□□□ -1.68
HIST1H1AQ02539 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
HIST1H1AQ02539 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
HIST1H1AQ02539 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
HIST1H1AQ02539 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
HIST1H1AQ02539 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
HIST1H1AQ02539 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
HIST1H1AQ02539 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
HIST1H1AQ02539 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC4.56□□□□□ -1.68
HIST1H1AQ02539 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
HIST1H1AQ02539 EIF3EP1-201ENST00000433978 1316 ntBASIC4.56□□□□□ -1.68
HIST1H1AQ02539 ZNF66-202ENST00000360204 1120 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
HIST1H1AQ02539 CRP-204ENST00000368112 787 ntTSL 2 BASIC4.56□□□□□ -1.68
HIST1H1AQ02539 AL157702.1-201ENST00000398764 426 ntBASIC4.56□□□□□ -1.68
HIST1H1AQ02539 PSMA6P1-201ENST00000400275 741 ntBASIC4.56□□□□□ -1.68
HIST1H1AQ02539 AL358178.1-201ENST00000407698 397 ntBASIC4.56□□□□□ -1.68
HIST1H1AQ02539 ATF2-205ENST00000409499 801 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
HIST1H1AQ02539 AC104823.1-201ENST00000413290 989 ntTSL 2 BASIC4.56□□□□□ -1.68
HIST1H1AQ02539 AL807757.2-201ENST00000416455 779 ntTSL 3 BASIC4.56□□□□□ -1.68
HIST1H1AQ02539 LCE6A-201ENST00000431011 628 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
HIST1H1AQ02539 AC094019.1-201ENST00000434678 472 ntBASIC4.56□□□□□ -1.68
HIST1H1AQ02539 AC099670.2-201ENST00000435130 321 ntBASIC4.56□□□□□ -1.68
HIST1H1AQ02539 MTND2P40-201ENST00000436718 841 ntBASIC4.56□□□□□ -1.68
HIST1H1AQ02539 AC013403.1-201ENST00000436954 263 ntBASIC4.56□□□□□ -1.68
HIST1H1AQ02539 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC4.56□□□□□ -1.68
HIST1H1AQ02539 CUBNP2-201ENST00000443534 1139 ntBASIC4.56□□□□□ -1.68
HIST1H1AQ02539 AC010240.2-201ENST00000445363 1205 ntBASIC4.56□□□□□ -1.68
HIST1H1AQ02539 AL136982.3-201ENST00000454709 688 ntTSL 3 BASIC4.56□□□□□ -1.68
HIST1H1AQ02539 SEPT7P3-201ENST00000455017 621 ntBASIC4.56□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 166.8 ms