Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 LINC01760-201ENST00000423410 382 ntTSL 2 BASIC4.02□□□□□ -1.77
RPL39P62891 AC234771.4-201ENST00000441416 730 ntBASIC4.02□□□□□ -1.77
RPL39P62891 TRMT2B-AS1-201ENST00000443801 205 ntTSL 5 BASIC4.02□□□□□ -1.77
RPL39P62891 OR7E116P-201ENST00000448529 957 ntBASIC4.02□□□□□ -1.77
RPL39P62891 RPL31P11-202ENST00000454082 372 ntBASIC4.02□□□□□ -1.77
RPL39P62891 AC073130.1-202ENST00000454897 587 ntTSL 2 BASIC4.02□□□□□ -1.77
RPL39P62891 SETP4-201ENST00000455717 868 ntBASIC4.02□□□□□ -1.77
RPL39P62891 SNORD125-201ENST00000459538 96 ntBASIC4.02□□□□□ -1.77
RPL39P62891 OR7E22P-201ENST00000478335 1035 ntBASIC4.02□□□□□ -1.77
RPL39P62891 RPL12P30-201ENST00000488389 499 ntBASIC4.02□□□□□ -1.77
RPL39P62891 DUTP1-201ENST00000493631 470 ntBASIC4.02□□□□□ -1.77
RPL39P62891 SNX18P25-201ENST00000510539 758 ntBASIC4.02□□□□□ -1.77
RPL39P62891 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC4.02□□□□□ -1.77
RPL39P62891 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC4.02□□□□□ -1.77
RPL39P62891 AC139697.1-201ENST00000548429 745 ntBASIC4.02□□□□□ -1.77
RPL39P62891 NELL2-211ENST00000548826 559 ntTSL 2 BASIC4.02□□□□□ -1.77
RPL39P62891 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC4.02□□□□□ -1.77
RPL39P62891 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC4.02□□□□□ -1.77
RPL39P62891 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC4.02□□□□□ -1.77
RPL39P62891 MED31-202ENST00000574128 619 ntTSL 3 BASIC4.02□□□□□ -1.77
RPL39P62891 STARD6-202ENST00000577499 696 ntTSL 2 BASIC4.02□□□□□ -1.77
RPL39P62891 AC024267.2-201ENST00000582737 417 ntBASIC4.02□□□□□ -1.77
RPL39P62891 LINC01999-201ENST00000592917 646 ntTSL 2 BASIC4.02□□□□□ -1.77
RPL39P62891 AC011478.1-201ENST00000593140 554 ntTSL 4 BASIC4.02□□□□□ -1.77
RPL39P62891 AC063977.7-201ENST00000594454 337 ntBASIC4.02□□□□□ -1.77
RPL39P62891 ZNF677-211ENST00000601828 719 ntTSL 2 BASIC4.02□□□□□ -1.77
RPL39P62891 AL589740.1-209ENST00000607032 1056 ntTSL 3 BASIC4.02□□□□□ -1.77
RPL39P62891 AL669942.1-206ENST00000610473 783 ntTSL 3 BASIC4.02□□□□□ -1.77
RPL39P62891 AC087565.2-201ENST00000637695 952 ntTSL 5 BASIC4.02□□□□□ -1.77
RPL39P62891 MAPK10-338ENST00000641647 3362 ntBASIC4.02□□□□□ -1.77
RPL39P62891 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
RPL39P62891 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC4.02□□□□□ -1.77
RPL39P62891 C11orf1-203ENST00000529270 1437 ntTSL 2 BASIC4.02□□□□□ -1.77
RPL39P62891 SLC10A7-204ENST00000502607 1638 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
RPL39P62891 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
RPL39P62891 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
RPL39P62891 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
RPL39P62891 GABRA2-215ENST00000540012 2588 ntTSL 5 BASIC4.02□□□□□ -1.77
RPL39P62891 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC4.02□□□□□ -1.77
RPL39P62891 GNL2P1-201ENST00000451274 2190 ntBASIC4.02□□□□□ -1.77
RPL39P62891 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
RPL39P62891 AC117409.1-201ENST00000470499 1310 ntBASIC4.01□□□□□ -1.77
RPL39P62891 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC4.01□□□□□ -1.77
RPL39P62891 AC217777.1-201ENST00000570034 1471 ntBASIC4.01□□□□□ -1.77
RPL39P62891 OR1D2-201ENST00000331459 939 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
RPL39P62891 RN7SKP77-201ENST00000363261 353 ntBASIC4.01□□□□□ -1.77
RPL39P62891 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
RPL39P62891 AC005042.1-201ENST00000393397 800 ntBASIC4.01□□□□□ -1.77
RPL39P62891 RPA3-204ENST00000406109 434 ntTSL 3 BASIC4.01□□□□□ -1.77
RPL39P62891 KCNJ13-202ENST00000409779 1099 ntTSL 2 BASIC4.01□□□□□ -1.77
RPL39P62891 GAS5-202ENST00000414075 413 ntTSL 2 BASIC4.01□□□□□ -1.77
RPL39P62891 AL135785.1-201ENST00000422554 399 ntTSL 3 BASIC4.01□□□□□ -1.77
RPL39P62891 AC108479.1-201ENST00000431142 427 ntBASIC4.01□□□□□ -1.77
RPL39P62891 TMEM183AP1-205ENST00000432739 290 ntBASIC4.01□□□□□ -1.77
RPL39P62891 AC128677.1-201ENST00000436016 442 ntBASIC4.01□□□□□ -1.77
RPL39P62891 AL136460.1-201ENST00000442389 473 ntTSL 3 BASIC4.01□□□□□ -1.77
RPL39P62891 TRIM60P16-201ENST00000444048 694 ntBASIC4.01□□□□□ -1.77
RPL39P62891 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC4.01□□□□□ -1.77
RPL39P62891 CBX1P2-201ENST00000453841 458 ntBASIC4.01□□□□□ -1.77
RPL39P62891 EIF3LP2-201ENST00000457262 807 ntBASIC4.01□□□□□ -1.77
RPL39P62891 TREML3P-201ENST00000457327 501 ntBASIC4.01□□□□□ -1.77
RPL39P62891 RN7SL790P-201ENST00000474043 298 ntBASIC4.01□□□□□ -1.77
RPL39P62891 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC4.01□□□□□ -1.77
RPL39P62891 NPM1P28-201ENST00000492269 840 ntBASIC4.01□□□□□ -1.77
RPL39P62891 AC008957.1-202ENST00000512329 681 ntTSL 3 BASIC4.01□□□□□ -1.77
RPL39P62891 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC4.01□□□□□ -1.77
RPL39P62891 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC4.01□□□□□ -1.77
RPL39P62891 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC4.01□□□□□ -1.77
RPL39P62891 AL359219.2-201ENST00000555184 348 ntBASIC4.01□□□□□ -1.77
RPL39P62891 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC4.01□□□□□ -1.77
RPL39P62891 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC4.01□□□□□ -1.77
RPL39P62891 TMEM202-202ENST00000567679 588 ntAPPRIS ALT2 TSL 2 BASIC4.01□□□□□ -1.77
RPL39P62891 AC090518.1-202ENST00000568246 578 ntTSL 4 BASIC4.01□□□□□ -1.77
RPL39P62891 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC4.01□□□□□ -1.77
RPL39P62891 AC010531.4-201ENST00000570286 576 ntTSL 4 BASIC4.01□□□□□ -1.77
RPL39P62891 ZNF174-204ENST00000572544 1002 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
RPL39P62891 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC4.01□□□□□ -1.77
RPL39P62891 DHFRP1-201ENST00000579682 559 ntBASIC4.01□□□□□ -1.77
RPL39P62891 MIR7515HG-235ENST00000590865 918 ntTSL 5 BASIC4.01□□□□□ -1.77
RPL39P62891 AC145423.1-201ENST00000605712 336 ntBASIC4.01□□□□□ -1.77
RPL39P62891 PACRG-210ENST00000611387 279 ntTSL 5 BASIC4.01□□□□□ -1.77
RPL39P62891 AL512652.1-201ENST00000619006 500 ntBASIC4.01□□□□□ -1.77
RPL39P62891 CCDC196-207ENST00000636229 1107 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
RPL39P62891 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC4.01□□□□□ -1.77
RPL39P62891 SAMD13-201ENST00000370668 1403 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
RPL39P62891 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC4.01□□□□□ -1.77
RPL39P62891 AL034549.2-201ENST00000618285 3373 ntBASIC4.01□□□□□ -1.77
RPL39P62891 AP002004.1-203ENST00000531091 1768 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
RPL39P62891 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
RPL39P62891 AC012254.3-201ENST00000591183 2117 ntBASIC4.01□□□□□ -1.77
RPL39P62891 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC4.01□□□□□ -1.77
RPL39P62891 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC4.01□□□□□ -1.77
RPL39P62891 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
RPL39P62891 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
RPL39P62891 OR4F13P-202ENST00000560066 2054 ntBASIC4.01□□□□□ -1.77
RPL39P62891 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC4.01□□□□□ -1.77
RPL39P62891 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC4□□□□□ -1.77
RPL39P62891 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC4□□□□□ -1.77
RPL39P62891 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC4□□□□□ -1.77
RPL39P62891 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 138.6 ms