Protein–RNA interactions for Protein: P60709

ACTB, Actin, cytoplasmic 1, humanhuman

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTBP60709 AC069208.1-201ENST00000540811 676 ntTSL 4 BASIC5.13□□□□□ -1.59
ACTBP60709 AL121594.2-201ENST00000541658 472 ntBASIC5.13□□□□□ -1.59
ACTBP60709 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC5.13□□□□□ -1.59
ACTBP60709 AC013640.1-201ENST00000565366 565 ntTSL 3 BASIC5.13□□□□□ -1.59
ACTBP60709 AC006305.2-201ENST00000589617 552 ntTSL 4 BASIC5.13□□□□□ -1.59
ACTBP60709 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC5.13□□□□□ -1.59
ACTBP60709 AC141002.1-201ENST00000607025 279 ntBASIC5.13□□□□□ -1.59
ACTBP60709 AC068726.1-201ENST00000610993 341 ntBASIC5.13□□□□□ -1.59
ACTBP60709 AC015712.7-201ENST00000615211 635 ntBASIC5.13□□□□□ -1.59
ACTBP60709 Metazoa_SRP.66-201ENST00000615609 282 ntBASIC5.13□□□□□ -1.59
ACTBP60709 Metazoa_SRP.77-201ENST00000616915 252 ntBASIC5.13□□□□□ -1.59
ACTBP60709 AC015660.5-201ENST00000623238 564 ntBASIC5.13□□□□□ -1.59
ACTBP60709 AC099329.1-203ENST00000629885 767 ntTSL 5 BASIC5.13□□□□□ -1.59
ACTBP60709 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC5.13□□□□□ -1.59
ACTBP60709 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC5.13□□□□□ -1.59
ACTBP60709 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC5.13□□□□□ -1.59
ACTBP60709 UEVLD-202ENST00000320750 1799 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
ACTBP60709 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC5.13□□□□□ -1.59
ACTBP60709 C3orf35-203ENST00000425564 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
ACTBP60709 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC5.13□□□□□ -1.59
ACTBP60709 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
ACTBP60709 SUCLG1-201ENST00000393868 1475 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
ACTBP60709 RBMS2-202ENST00000542360 1484 ntTSL 2 BASIC5.13□□□□□ -1.59
ACTBP60709 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
ACTBP60709 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC5.12□□□□□ -1.59
ACTBP60709 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC5.12□□□□□ -1.59
ACTBP60709 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC5.12□□□□□ -1.59
ACTBP60709 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
ACTBP60709 AC130304.1-201ENST00000622942 2385 ntBASIC5.12□□□□□ -1.59
ACTBP60709 RACGAP1-203ENST00000454520 3080 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
ACTBP60709 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC5.12□□□□□ -1.59
ACTBP60709 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC5.12□□□□□ -1.59
ACTBP60709 BPIFA2-201ENST00000253362 1122 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
ACTBP60709 BPIFA2-202ENST00000354932 1047 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
ACTBP60709 RNA5SP485-201ENST00000365053 119 ntBASIC5.12□□□□□ -1.59
ACTBP60709 EEF1AKMT1-201ENST00000382754 875 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
ACTBP60709 MIR551B-201ENST00000384984 96 ntBASIC5.12□□□□□ -1.59
ACTBP60709 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
ACTBP60709 RN7SKP121-201ENST00000410842 305 ntBASIC5.12□□□□□ -1.59
ACTBP60709 RN7SKP279-201ENST00000411383 298 ntBASIC5.12□□□□□ -1.59
ACTBP60709 AL133268.4-201ENST00000424868 472 ntTSL 3 BASIC5.12□□□□□ -1.59
ACTBP60709 PRH1-201ENST00000428168 603 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
ACTBP60709 GTF3AP6-201ENST00000432585 986 ntBASIC5.12□□□□□ -1.59
ACTBP60709 AC128677.1-201ENST00000436016 442 ntBASIC5.12□□□□□ -1.59
ACTBP60709 AL731544.1-201ENST00000436500 370 ntTSL 5 BASIC5.12□□□□□ -1.59
ACTBP60709 EMC3-AS1-205ENST00000438698 534 ntBASIC5.12□□□□□ -1.59
ACTBP60709 RPS18P1-201ENST00000447840 458 ntBASIC5.12□□□□□ -1.59
ACTBP60709 NDUFB3-204ENST00000454214 547 ntAPPRIS P1 TSL 2 BASIC5.12□□□□□ -1.59
ACTBP60709 RARRES2P3-201ENST00000457739 473 ntBASIC5.12□□□□□ -1.59
ACTBP60709 GLRX-203ENST00000505427 632 ntAPPRIS P1 TSL 2 BASIC5.12□□□□□ -1.59
ACTBP60709 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC5.12□□□□□ -1.59
ACTBP60709 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC5.12□□□□□ -1.59
ACTBP60709 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC5.12□□□□□ -1.59
ACTBP60709 AC124891.1-201ENST00000536322 519 ntBASIC5.12□□□□□ -1.59
ACTBP60709 TMEM106C-215ENST00000550552 776 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
ACTBP60709 AC025283.1-201ENST00000572039 734 ntBASIC5.12□□□□□ -1.59
ACTBP60709 DSG1-AS1-202ENST00000578477 588 ntTSL 3 BASIC5.12□□□□□ -1.59
ACTBP60709 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC5.12□□□□□ -1.59
ACTBP60709 AC004917.1-204ENST00000592441 701 ntTSL 2 BASIC5.12□□□□□ -1.59
ACTBP60709 AC092067.1-201ENST00000592929 488 ntTSL 3 BASIC5.12□□□□□ -1.59
ACTBP60709 AC211433.1-206ENST00000595409 733 ntTSL 5 BASIC5.12□□□□□ -1.59
ACTBP60709 AC008555.7-201ENST00000605008 583 ntBASIC5.12□□□□□ -1.59
ACTBP60709 AL589740.1-209ENST00000607032 1056 ntTSL 3 BASIC5.12□□□□□ -1.59
ACTBP60709 C5orf63-208ENST00000607731 478 ntTSL 5 BASIC5.12□□□□□ -1.59
ACTBP60709 AC005899.6-201ENST00000620729 297 ntBASIC5.12□□□□□ -1.59
ACTBP60709 AL138693.1-201ENST00000622219 129 ntBASIC5.12□□□□□ -1.59
ACTBP60709 AC022400.9-201ENST00000623633 273 ntBASIC5.12□□□□□ -1.59
ACTBP60709 SOX9-AS1-218ENST00000628742 733 ntTSL 5 BASIC5.12□□□□□ -1.59
ACTBP60709 AL161457.2-202ENST00000629161 743 ntTSL 5 BASIC5.12□□□□□ -1.59
ACTBP60709 EEF1A1P30-201ENST00000429708 1315 ntBASIC5.12□□□□□ -1.59
ACTBP60709 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
ACTBP60709 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
ACTBP60709 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
ACTBP60709 MTCO1P46-201ENST00000451639 1491 ntBASIC5.12□□□□□ -1.59
ACTBP60709 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
ACTBP60709 HELLS-205ENST00000394036 3131 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
ACTBP60709 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
ACTBP60709 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC5.11□□□□□ -1.59
ACTBP60709 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
ACTBP60709 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC5.11□□□□□ -1.59
ACTBP60709 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC5.11□□□□□ -1.59
ACTBP60709 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC5.11□□□□□ -1.59
ACTBP60709 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC5.11□□□□□ -1.59
ACTBP60709 SDHAF3-201ENST00000360382 731 ntTSL 2 BASIC5.11□□□□□ -1.59
ACTBP60709 RN7SKP69-201ENST00000365390 305 ntBASIC5.11□□□□□ -1.59
ACTBP60709 AC087752.1-201ENST00000391360 558 ntBASIC5.11□□□□□ -1.59
ACTBP60709 GGA1-205ENST00000405147 575 ntTSL 4 BASIC5.11□□□□□ -1.59
ACTBP60709 AC234781.4-201ENST00000419384 244 ntBASIC5.11□□□□□ -1.59
ACTBP60709 LINC00352-201ENST00000425800 552 ntTSL 3 BASIC5.11□□□□□ -1.59
ACTBP60709 CRIP1P1-201ENST00000427567 185 ntBASIC5.11□□□□□ -1.59
ACTBP60709 AKR1D1-203ENST00000432161 1236 ntTSL 2 BASIC5.11□□□□□ -1.59
ACTBP60709 AC016582.1-203ENST00000433142 502 ntTSL 3 BASIC5.11□□□□□ -1.59
ACTBP60709 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
ACTBP60709 MTND2P40-201ENST00000436718 841 ntBASIC5.11□□□□□ -1.59
ACTBP60709 AL356121.1-201ENST00000442911 156 ntBASIC5.11□□□□□ -1.59
ACTBP60709 MED28P3-201ENST00000444288 531 ntBASIC5.11□□□□□ -1.59
ACTBP60709 AC092601.1-201ENST00000444526 383 ntBASIC5.11□□□□□ -1.59
ACTBP60709 RBMY2HP-201ENST00000457961 720 ntBASIC5.11□□□□□ -1.59
ACTBP60709 NPM1P28-201ENST00000492269 840 ntBASIC5.11□□□□□ -1.59
ACTBP60709 AC096746.1-201ENST00000501965 1042 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 67.9 ms