Protein–RNA interactions for Protein: P52797

EFNA3, Ephrin-A3, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA3P52797 RNA5SP435-201ENST00000364044 108 ntBASIC5.58□□□□□ -1.52
EFNA3P52797 RN7SKP292-201ENST00000365522 317 ntBASIC5.58□□□□□ -1.52
EFNA3P52797 OR2W1-201ENST00000377175 1028 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
EFNA3P52797 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC5.58□□□□□ -1.52
EFNA3P52797 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC5.58□□□□□ -1.52
EFNA3P52797 AC245884.2-201ENST00000426257 404 ntBASIC5.58□□□□□ -1.52
EFNA3P52797 NPM1P25-201ENST00000429734 854 ntBASIC5.58□□□□□ -1.52
EFNA3P52797 CASP5-205ENST00000444749 1237 ntAPPRIS P1 TSL 2 BASIC5.58□□□□□ -1.52
EFNA3P52797 AC104164.1-201ENST00000460282 590 ntBASIC5.58□□□□□ -1.52
EFNA3P52797 AL157777.1-201ENST00000468100 304 ntBASIC5.58□□□□□ -1.52
EFNA3P52797 LINC00483-204ENST00000502517 940 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
EFNA3P52797 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC5.58□□□□□ -1.52
EFNA3P52797 CASP5-209ENST00000531367 879 ntTSL 5 BASIC5.58□□□□□ -1.52
EFNA3P52797 PCNAP4-201ENST00000532690 730 ntBASIC5.58□□□□□ -1.52
EFNA3P52797 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC5.58□□□□□ -1.52
EFNA3P52797 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC5.58□□□□□ -1.52
EFNA3P52797 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC5.58□□□□□ -1.52
EFNA3P52797 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC5.58□□□□□ -1.52
EFNA3P52797 LINC01355-202ENST00000604481 400 ntTSL 2 BASIC5.58□□□□□ -1.52
EFNA3P52797 OR11H2-202ENST00000641517 1085 ntBASIC5.58□□□□□ -1.52
EFNA3P52797 OR8S1-202ENST00000641651 939 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
EFNA3P52797 AL591135.1-201ENST00000401578 5914 ntBASIC5.58□□□□□ -1.52
EFNA3P52797 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
EFNA3P52797 LINC01504-201ENST00000436054 2078 ntTSL 2 BASIC5.58□□□□□ -1.52
EFNA3P52797 ZNF184-202ENST00000377419 2899 ntAPPRIS P1 TSL 4 BASIC5.58□□□□□ -1.52
EFNA3P52797 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC5.58□□□□□ -1.52
EFNA3P52797 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
EFNA3P52797 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
EFNA3P52797 PUS10-201ENST00000316752 2278 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
EFNA3P52797 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
EFNA3P52797 KLHL41-201ENST00000284669 2464 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
EFNA3P52797 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
EFNA3P52797 AC140479.2-201ENST00000421567 3130 ntBASIC5.57□□□□□ -1.52
EFNA3P52797 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC5.57□□□□□ -1.52
EFNA3P52797 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC5.57□□□□□ -1.52
EFNA3P52797 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
EFNA3P52797 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
EFNA3P52797 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
EFNA3P52797 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
EFNA3P52797 HGF-205ENST00000423064 1990 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
EFNA3P52797 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC5.57□□□□□ -1.52
EFNA3P52797 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC5.57□□□□□ -1.52
EFNA3P52797 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
EFNA3P52797 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
EFNA3P52797 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC5.57□□□□□ -1.52
EFNA3P52797 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
EFNA3P52797 AL031985.1-201ENST00000392713 418 ntBASIC5.57□□□□□ -1.52
EFNA3P52797 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC5.57□□□□□ -1.52
EFNA3P52797 METTL5-204ENST00000409340 472 ntTSL 5 BASIC5.57□□□□□ -1.52
EFNA3P52797 CDY17P-201ENST00000414121 1282 ntBASIC5.57□□□□□ -1.52
EFNA3P52797 SMC4P1-201ENST00000414479 527 ntBASIC5.57□□□□□ -1.52
EFNA3P52797 LINC01820-201ENST00000418415 570 ntTSL 2 BASIC5.57□□□□□ -1.52
EFNA3P52797 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC5.57□□□□□ -1.52
EFNA3P52797 MED4-AS1-201ENST00000422483 542 ntTSL 2 BASIC5.57□□□□□ -1.52
EFNA3P52797 AC104843.2-201ENST00000427666 297 ntBASIC5.57□□□□□ -1.52
EFNA3P52797 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC5.57□□□□□ -1.52
EFNA3P52797 RPL23AP19-201ENST00000436229 369 ntBASIC5.57□□□□□ -1.52
EFNA3P52797 AC079922.1-201ENST00000443291 359 ntBASIC5.57□□□□□ -1.52
EFNA3P52797 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC5.57□□□□□ -1.52
EFNA3P52797 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC5.57□□□□□ -1.52
EFNA3P52797 AP006222.1-205ENST00000450734 457 ntBASIC5.57□□□□□ -1.52
EFNA3P52797 AC007998.1-201ENST00000474156 672 ntBASIC5.57□□□□□ -1.52
EFNA3P52797 AL035690.1-201ENST00000490892 383 ntBASIC5.57□□□□□ -1.52
EFNA3P52797 SETP21-201ENST00000514799 892 ntBASIC5.57□□□□□ -1.52
EFNA3P52797 RNU6-964P-201ENST00000516524 69 ntBASIC5.57□□□□□ -1.52
EFNA3P52797 AP000648.1-201ENST00000529682 397 ntBASIC5.57□□□□□ -1.52
EFNA3P52797 AC244502.2-201ENST00000543361 851 ntBASIC5.57□□□□□ -1.52
EFNA3P52797 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC5.57□□□□□ -1.52
EFNA3P52797 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC5.57□□□□□ -1.52
EFNA3P52797 AC008521.2-201ENST00000591021 259 ntBASIC5.57□□□□□ -1.52
EFNA3P52797 MIR132-201ENST00000591554 101 ntBASIC5.57□□□□□ -1.52
EFNA3P52797 AC011478.1-201ENST00000593140 554 ntTSL 4 BASIC5.57□□□□□ -1.52
EFNA3P52797 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
EFNA3P52797 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
EFNA3P52797 AC004890.3-201ENST00000605566 1095 ntBASIC5.57□□□□□ -1.52
EFNA3P52797 AL031601.1-201ENST00000605702 394 ntBASIC5.57□□□□□ -1.52
EFNA3P52797 AL352984.2-202ENST00000613699 155 ntBASIC5.57□□□□□ -1.52
EFNA3P52797 AC239809.3-202ENST00000628902 686 ntTSL 5 BASIC5.57□□□□□ -1.52
EFNA3P52797 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
EFNA3P52797 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC5.57□□□□□ -1.52
EFNA3P52797 RNF19BPY-201ENST00000458209 1550 ntBASIC5.57□□□□□ -1.52
EFNA3P52797 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC5.57□□□□□ -1.52
EFNA3P52797 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
EFNA3P52797 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
EFNA3P52797 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
EFNA3P52797 MFSD8-201ENST00000296468 4516 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
EFNA3P52797 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC5.57□□□□□ -1.52
EFNA3P52797 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
EFNA3P52797 ALG11-202ENST00000521508 2558 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
EFNA3P52797 LINC00615-201ENST00000546725 1406 ntTSL 2 BASIC5.57□□□□□ -1.52
EFNA3P52797 OR2T5-201ENST00000641363 2525 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
EFNA3P52797 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC5.56□□□□□ -1.52
EFNA3P52797 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
EFNA3P52797 MAPKAPK5P1-201ENST00000431810 1376 ntBASIC5.56□□□□□ -1.52
EFNA3P52797 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC5.56□□□□□ -1.52
EFNA3P52797 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC5.56□□□□□ -1.52
EFNA3P52797 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC5.56□□□□□ -1.52
EFNA3P52797 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC5.56□□□□□ -1.52
EFNA3P52797 RN7SKP128-201ENST00000364270 303 ntBASIC5.56□□□□□ -1.52
EFNA3P52797 RNA5SP510-201ENST00000364697 99 ntBASIC5.56□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 87.4 ms