Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 AL356309.2-201ENST00000454034 719 ntTSL 5 BASIC5.21□□□□□ -1.58
CX3CR1P49238 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC5.21□□□□□ -1.58
CX3CR1P49238 AL603882.1-201ENST00000463059 681 ntBASIC5.21□□□□□ -1.58
CX3CR1P49238 PFN1P6-201ENST00000476786 399 ntBASIC5.21□□□□□ -1.58
CX3CR1P49238 MOSPD2-206ENST00000497603 775 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
CX3CR1P49238 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC5.21□□□□□ -1.58
CX3CR1P49238 AC008957.1-203ENST00000508745 589 ntTSL 3 BASIC5.21□□□□□ -1.58
CX3CR1P49238 snoU109.5-201ENST00000516231 132 ntBASIC5.21□□□□□ -1.58
CX3CR1P49238 IGKV1OR22-1-201ENST00000521497 360 ntBASIC5.21□□□□□ -1.58
CX3CR1P49238 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
CX3CR1P49238 ST3GAL3-232ENST00000531451 420 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
CX3CR1P49238 AP001893.1-201ENST00000532866 362 ntTSL 5 BASIC5.21□□□□□ -1.58
CX3CR1P49238 LINC02420-201ENST00000543387 741 ntTSL 5 BASIC5.21□□□□□ -1.58
CX3CR1P49238 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC5.21□□□□□ -1.58
CX3CR1P49238 LINC00640-204ENST00000557295 708 ntTSL 5 BASIC5.21□□□□□ -1.58
CX3CR1P49238 RORA-AS2-202ENST00000561413 576 ntTSL 4 BASIC5.21□□□□□ -1.58
CX3CR1P49238 AC007346.1-201ENST00000569208 867 ntBASIC5.21□□□□□ -1.58
CX3CR1P49238 AC010401.2-202ENST00000570663 396 ntTSL 2 BASIC5.21□□□□□ -1.58
CX3CR1P49238 AC090403.1-202ENST00000582108 833 ntTSL 3 BASIC5.21□□□□□ -1.58
CX3CR1P49238 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC5.21□□□□□ -1.58
CX3CR1P49238 LINC01198-204ENST00000594153 552 ntTSL 3 BASIC5.21□□□□□ -1.58
CX3CR1P49238 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC5.21□□□□□ -1.58
CX3CR1P49238 SMIM12P1-201ENST00000603004 274 ntBASIC5.21□□□□□ -1.58
CX3CR1P49238 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC5.21□□□□□ -1.58
CX3CR1P49238 IPO5-229ENST00000631030 192 ntTSL 5 BASIC5.21□□□□□ -1.58
CX3CR1P49238 AL357140.4-201ENST00000636827 412 ntBASIC5.21□□□□□ -1.58
CX3CR1P49238 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC5.21□□□□□ -1.58
CX3CR1P49238 5S_rRNA.29-201ENST00000641250 107 ntBASIC5.21□□□□□ -1.58
CX3CR1P49238 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC5.21□□□□□ -1.58
CX3CR1P49238 MTRNR2L3-201ENST00000543500 1539 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
CX3CR1P49238 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
CX3CR1P49238 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.58
CX3CR1P49238 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC5.21□□□□□ -1.58
CX3CR1P49238 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC5.21□□□□□ -1.58
CX3CR1P49238 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC5.21□□□□□ -1.58
CX3CR1P49238 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC5.21□□□□□ -1.58
CX3CR1P49238 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.58
CX3CR1P49238 GNRHR-201ENST00000226413 2164 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
CX3CR1P49238 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC5.21□□□□□ -1.58
CX3CR1P49238 MTCO1P46-201ENST00000451639 1491 ntBASIC5.2□□□□□ -1.58
CX3CR1P49238 RALYL-206ENST00000521376 1457 ntTSL 5 BASIC5.2□□□□□ -1.58
CX3CR1P49238 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC5.2□□□□□ -1.58
CX3CR1P49238 IKZF3-213ENST00000439167 1879 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CX3CR1P49238 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
CX3CR1P49238 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CX3CR1P49238 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CX3CR1P49238 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC5.2□□□□□ -1.58
CX3CR1P49238 CHN1-201ENST00000295497 2047 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CX3CR1P49238 AC123769.1-201ENST00000530992 3192 ntBASIC5.2□□□□□ -1.58
CX3CR1P49238 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CX3CR1P49238 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
CX3CR1P49238 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CX3CR1P49238 RN7SKP128-201ENST00000364270 303 ntBASIC5.2□□□□□ -1.58
CX3CR1P49238 YWHAZP6-201ENST00000399764 738 ntBASIC5.2□□□□□ -1.58
CX3CR1P49238 RPA3-204ENST00000406109 434 ntTSL 3 BASIC5.2□□□□□ -1.58
CX3CR1P49238 CBX1P3-201ENST00000413296 527 ntBASIC5.2□□□□□ -1.58
CX3CR1P49238 AL035422.1-201ENST00000414193 397 ntBASIC5.2□□□□□ -1.58
CX3CR1P49238 AC013268.2-201ENST00000420753 337 ntBASIC5.2□□□□□ -1.58
CX3CR1P49238 VTI1BP4-201ENST00000427516 527 ntBASIC5.2□□□□□ -1.58
CX3CR1P49238 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC5.2□□□□□ -1.58
CX3CR1P49238 BX276092.6-201ENST00000430476 250 ntBASIC5.2□□□□□ -1.58
CX3CR1P49238 AC108479.1-201ENST00000431142 427 ntBASIC5.2□□□□□ -1.58
CX3CR1P49238 AL663074.2-201ENST00000440621 479 ntBASIC5.2□□□□□ -1.58
CX3CR1P49238 TRIM60P16-201ENST00000444048 694 ntBASIC5.2□□□□□ -1.58
CX3CR1P49238 LINC02096-201ENST00000445035 953 ntTSL 5 BASIC5.2□□□□□ -1.58
CX3CR1P49238 AC007383.1-201ENST00000445875 636 ntBASIC5.2□□□□□ -1.58
CX3CR1P49238 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC5.2□□□□□ -1.58
CX3CR1P49238 PPIAP7-201ENST00000454070 489 ntBASIC5.2□□□□□ -1.58
CX3CR1P49238 BX276092.8-201ENST00000455722 250 ntBASIC5.2□□□□□ -1.58
CX3CR1P49238 RN7SL254P-201ENST00000460609 284 ntBASIC5.2□□□□□ -1.58
CX3CR1P49238 AC090602.1-201ENST00000469695 252 ntBASIC5.2□□□□□ -1.58
CX3CR1P49238 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC5.2□□□□□ -1.58
CX3CR1P49238 SUMO2P4-201ENST00000504193 276 ntBASIC5.2□□□□□ -1.58
CX3CR1P49238 AC008957.1-202ENST00000512329 681 ntTSL 3 BASIC5.2□□□□□ -1.58
CX3CR1P49238 AP000620.1-201ENST00000527147 504 ntBASIC5.2□□□□□ -1.58
CX3CR1P49238 AP000619.2-201ENST00000546014 969 ntBASIC5.2□□□□□ -1.58
CX3CR1P49238 CNEP1R1-204ENST00000562576 656 ntTSL 5 BASIC5.2□□□□□ -1.58
CX3CR1P49238 STARD6-202ENST00000577499 696 ntTSL 2 BASIC5.2□□□□□ -1.58
CX3CR1P49238 MIR4433B-201ENST00000581329 102 ntBASIC5.2□□□□□ -1.58
CX3CR1P49238 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC5.2□□□□□ -1.58
CX3CR1P49238 LINC01533-204ENST00000590719 435 ntTSL 5 BASIC5.2□□□□□ -1.58
CX3CR1P49238 uc_338.29-201ENST00000615099 168 ntBASIC5.2□□□□□ -1.58
CX3CR1P49238 FAM27E2-201ENST00000619668 403 ntBASIC5.2□□□□□ -1.58
CX3CR1P49238 AL357562.1-201ENST00000624911 609 ntBASIC5.2□□□□□ -1.58
CX3CR1P49238 AC073488.6-201ENST00000632293 754 ntBASIC5.2□□□□□ -1.58
CX3CR1P49238 AP000550.3-201ENST00000637734 379 ntBASIC5.2□□□□□ -1.58
CX3CR1P49238 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC5.2□□□□□ -1.58
CX3CR1P49238 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
CX3CR1P49238 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CX3CR1P49238 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CX3CR1P49238 LINC02318-201ENST00000553785 1334 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CX3CR1P49238 C2CD6-201ENST00000286195 2104 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
CX3CR1P49238 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC5.19□□□□□ -1.58
CX3CR1P49238 RBMY1HP-201ENST00000382759 1389 ntBASIC5.19□□□□□ -1.58
CX3CR1P49238 PPBPP2-201ENST00000513150 1362 ntBASIC5.19□□□□□ -1.58
CX3CR1P49238 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CX3CR1P49238 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC5.19□□□□□ -1.58
CX3CR1P49238 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC5.19□□□□□ -1.58
CX3CR1P49238 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CX3CR1P49238 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 128.9 ms