Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 MIR6085-201ENST00000618314 110 ntBASIC5.54□□□□□ -1.52
SOX2P48431 AC084824.4-201ENST00000620106 731 ntBASIC5.54□□□□□ -1.52
SOX2P48431 AL356863.1-201ENST00000623378 1080 ntBASIC5.54□□□□□ -1.52
SOX2P48431 AC126544.2-201ENST00000625174 749 ntBASIC5.54□□□□□ -1.52
SOX2P48431 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC5.54□□□□□ -1.52
SOX2P48431 AL590396.4-201ENST00000636779 956 ntBASIC5.54□□□□□ -1.52
SOX2P48431 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
SOX2P48431 AC104958.1-201ENST00000509350 1973 ntTSL 2 BASIC5.54□□□□□ -1.52
SOX2P48431 MCTP2-208ENST00000557742 1957 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
SOX2P48431 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
SOX2P48431 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC5.54□□□□□ -1.52
SOX2P48431 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC5.54□□□□□ -1.52
SOX2P48431 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
SOX2P48431 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
SOX2P48431 EPB41L2-220ENST00000528282 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
SOX2P48431 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
SOX2P48431 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC5.54□□□□□ -1.52
SOX2P48431 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
SOX2P48431 SNW1-204ENST00000554775 1687 ntTSL 5 BASIC5.53□□□□□ -1.52
SOX2P48431 MPP5-204ENST00000555925 5006 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
SOX2P48431 LRRC37A3-202ENST00000334962 2654 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
SOX2P48431 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC5.53□□□□□ -1.52
SOX2P48431 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
SOX2P48431 NOL4-203ENST00000538587 1979 ntTSL 2 BASIC5.53□□□□□ -1.52
SOX2P48431 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC5.53□□□□□ -1.52
SOX2P48431 CALB1-208ENST00000518457 1490 ntTSL 2 BASIC5.53□□□□□ -1.52
SOX2P48431 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
SOX2P48431 AC007878.1-201ENST00000434786 1615 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
SOX2P48431 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC5.53□□□□□ -1.52
SOX2P48431 AC020656.2-201ENST00000613291 5309 ntBASIC5.53□□□□□ -1.52
SOX2P48431 PAGE4-201ENST00000218068 499 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
SOX2P48431 OR5P2-201ENST00000329434 1069 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
SOX2P48431 RNU1-59P-201ENST00000364829 162 ntBASIC5.53□□□□□ -1.52
SOX2P48431 AC074375.1-201ENST00000372993 192 ntBASIC5.53□□□□□ -1.52
SOX2P48431 NCR2-201ENST00000373083 1154 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
SOX2P48431 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC5.53□□□□□ -1.52
SOX2P48431 MIR433-201ENST00000384837 93 ntBASIC5.53□□□□□ -1.52
SOX2P48431 EEF1GP6-201ENST00000402309 905 ntBASIC5.53□□□□□ -1.52
SOX2P48431 CYTOR-207ENST00000414584 772 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
SOX2P48431 BX664727.1-201ENST00000416024 466 ntBASIC5.53□□□□□ -1.52
SOX2P48431 MICG-208ENST00000416822 132 ntBASIC5.53□□□□□ -1.52
SOX2P48431 HYALP1-201ENST00000417674 1279 ntBASIC5.53□□□□□ -1.52
SOX2P48431 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC5.53□□□□□ -1.52
SOX2P48431 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC5.53□□□□□ -1.52
SOX2P48431 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
SOX2P48431 MTCO1P51-201ENST00000427672 1060 ntBASIC5.53□□□□□ -1.52
SOX2P48431 AC104076.1-201ENST00000428080 265 ntTSL 3 BASIC5.53□□□□□ -1.52
SOX2P48431 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC5.53□□□□□ -1.52
SOX2P48431 AL590399.4-201ENST00000436561 601 ntBASIC5.53□□□□□ -1.52
SOX2P48431 AL139220.2-214ENST00000437643 614 ntTSL 3 BASIC5.53□□□□□ -1.52
SOX2P48431 BX679664.2-201ENST00000439282 283 ntBASIC5.53□□□□□ -1.52
SOX2P48431 AC019186.1-201ENST00000447019 545 ntTSL 3 BASIC5.53□□□□□ -1.52
SOX2P48431 LINC01006-207ENST00000458645 738 ntTSL 4 BASIC5.53□□□□□ -1.52
SOX2P48431 AC068587.2-201ENST00000478386 781 ntBASIC5.53□□□□□ -1.52
SOX2P48431 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC5.53□□□□□ -1.52
SOX2P48431 OR9A1P-202ENST00000484361 945 ntBASIC5.53□□□□□ -1.52
SOX2P48431 SNX18P25-201ENST00000510539 758 ntBASIC5.53□□□□□ -1.52
SOX2P48431 AC091979.1-201ENST00000517595 706 ntTSL 2 BASIC5.53□□□□□ -1.52
SOX2P48431 AP001208.1-201ENST00000518612 408 ntTSL 3 BASIC5.53□□□□□ -1.52
SOX2P48431 AC022973.2-201ENST00000520146 549 ntTSL 4 BASIC5.53□□□□□ -1.52
SOX2P48431 AC010376.1-201ENST00000522101 334 ntBASIC5.53□□□□□ -1.52
SOX2P48431 AP002336.1-201ENST00000531426 422 ntTSL 2 BASIC5.53□□□□□ -1.52
SOX2P48431 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC5.53□□□□□ -1.52
SOX2P48431 OR4A41P-201ENST00000533053 928 ntBASIC5.53□□□□□ -1.52
SOX2P48431 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC5.53□□□□□ -1.52
SOX2P48431 AL512310.9-201ENST00000553311 948 ntBASIC5.53□□□□□ -1.52
SOX2P48431 AC025918.2-201ENST00000558683 763 ntBASIC5.53□□□□□ -1.52
SOX2P48431 AC010809.1-201ENST00000560268 562 ntTSL 3 BASIC5.53□□□□□ -1.52
SOX2P48431 LINC01243-201ENST00000562065 721 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
SOX2P48431 AL390718.1-201ENST00000566904 506 ntTSL 3 BASIC5.53□□□□□ -1.52
SOX2P48431 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC5.53□□□□□ -1.52
SOX2P48431 MIR3189-201ENST00000578735 73 ntBASIC5.53□□□□□ -1.52
SOX2P48431 LINC01476-202ENST00000584262 635 ntTSL 4 BASIC5.53□□□□□ -1.52
SOX2P48431 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC5.53□□□□□ -1.52
SOX2P48431 AC008507.2-201ENST00000588402 1176 ntBASIC5.53□□□□□ -1.52
SOX2P48431 AC069431.2-201ENST00000604149 1099 ntBASIC5.53□□□□□ -1.52
SOX2P48431 AL445435.1-201ENST00000604232 665 ntBASIC5.53□□□□□ -1.52
SOX2P48431 LY86-AS1-206ENST00000607278 677 ntTSL 3 BASIC5.53□□□□□ -1.52
SOX2P48431 AL592494.3-201ENST00000609485 464 ntBASIC5.53□□□□□ -1.52
SOX2P48431 U1.25-201ENST00000614085 162 ntBASIC5.53□□□□□ -1.52
SOX2P48431 U1.34-201ENST00000618578 162 ntBASIC5.53□□□□□ -1.52
SOX2P48431 RMST_5.1-201ENST00000618704 126 ntBASIC5.53□□□□□ -1.52
SOX2P48431 U1.31-201ENST00000620022 160 ntBASIC5.53□□□□□ -1.52
SOX2P48431 RNASE11-211ENST00000620912 883 ntAPPRIS P2 TSL 1 (best) BASIC5.53□□□□□ -1.52
SOX2P48431 AC093875.1-201ENST00000623688 504 ntBASIC5.53□□□□□ -1.52
SOX2P48431 AC117503.3-201ENST00000623811 601 ntBASIC5.53□□□□□ -1.52
SOX2P48431 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC5.53□□□□□ -1.52
SOX2P48431 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC5.53□□□□□ -1.52
SOX2P48431 AL356479.1-203ENST00000411798 1440 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
SOX2P48431 CYP51A1-204ENST00000450723 1729 ntTSL 2 BASIC5.53□□□□□ -1.52
SOX2P48431 ZNF610-202ENST00000327920 1855 ntAPPRIS P3 TSL 2 BASIC5.53□□□□□ -1.52
SOX2P48431 AL359955.1-201ENST00000455242 3275 ntBASIC5.53□□□□□ -1.52
SOX2P48431 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC5.53□□□□□ -1.52
SOX2P48431 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
SOX2P48431 AC010132.4-201ENST00000569883 1368 ntBASIC5.53□□□□□ -1.52
SOX2P48431 AC021074.3-201ENST00000476385 1825 ntTSL 2 BASIC5.53□□□□□ -1.52
SOX2P48431 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
SOX2P48431 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC5.53□□□□□ -1.52
SOX2P48431 NSF-206ENST00000575068 2667 ntTSL 2 BASIC5.52□□□□□ -1.53
SOX2P48431 HMMR-204ENST00000432118 2084 ntAPPRIS ALT2 TSL 2 BASIC5.52□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 66.9 ms