Protein–RNA interactions for Protein: P41235

HNF4A, Hepatocyte nuclear factor 4-alpha, humanhuman

Predictions only

Length 474 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4AP41235 AC004594.1-201ENST00000482375 463 ntTSL 3 BASIC5.95□□□□□ -1.46
HNF4AP41235 AL035690.1-201ENST00000490892 383 ntBASIC5.95□□□□□ -1.46
HNF4AP41235 RPL9P15-201ENST00000491096 532 ntBASIC5.95□□□□□ -1.46
HNF4AP41235 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC5.95□□□□□ -1.46
HNF4AP41235 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC5.95□□□□□ -1.46
HNF4AP41235 LINC01093-201ENST00000506479 634 ntTSL 3 BASIC5.95□□□□□ -1.46
HNF4AP41235 AC090958.1-201ENST00000511122 351 ntBASIC5.95□□□□□ -1.46
HNF4AP41235 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC5.95□□□□□ -1.46
HNF4AP41235 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC5.95□□□□□ -1.46
HNF4AP41235 AC068672.2-201ENST00000524022 336 ntTSL 3 BASIC5.95□□□□□ -1.46
HNF4AP41235 AP000722.1-201ENST00000531176 775 ntTSL 3 BASIC5.95□□□□□ -1.46
HNF4AP41235 GOLT1B-205ENST00000540141 1055 ntAPPRIS ALT1 TSL 4 BASIC5.95□□□□□ -1.46
HNF4AP41235 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC5.95□□□□□ -1.46
HNF4AP41235 AL358913.1-201ENST00000554342 121 ntBASIC5.95□□□□□ -1.46
HNF4AP41235 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC5.95□□□□□ -1.46
HNF4AP41235 AC004232.2-201ENST00000574245 821 ntBASIC5.95□□□□□ -1.46
HNF4AP41235 AL132655.1-201ENST00000601795 1153 ntTSL 3 BASIC5.95□□□□□ -1.46
HNF4AP41235 AL360012.1-201ENST00000602813 131 ntBASIC5.95□□□□□ -1.46
HNF4AP41235 AC092944.2-201ENST00000605443 889 ntBASIC5.95□□□□□ -1.46
HNF4AP41235 AL161457.2-204ENST00000609241 869 ntTSL 5 BASIC5.95□□□□□ -1.46
HNF4AP41235 MIR6721-201ENST00000617181 87 ntBASIC5.95□□□□□ -1.46
HNF4AP41235 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
HNF4AP41235 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
HNF4AP41235 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
HNF4AP41235 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
HNF4AP41235 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC5.95□□□□□ -1.46
HNF4AP41235 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC5.95□□□□□ -1.46
HNF4AP41235 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC5.95□□□□□ -1.46
HNF4AP41235 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
HNF4AP41235 ZNF727-201ENST00000456806 1679 ntAPPRIS P1 TSL 4 BASIC5.94□□□□□ -1.46
HNF4AP41235 AC018717.1-201ENST00000457712 1505 ntBASIC5.94□□□□□ -1.46
HNF4AP41235 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC5.94□□□□□ -1.46
HNF4AP41235 AC114876.1-201ENST00000490962 1366 ntBASIC5.94□□□□□ -1.46
HNF4AP41235 PPBPP2-201ENST00000513150 1362 ntBASIC5.94□□□□□ -1.46
HNF4AP41235 OR14A16-202ENST00000641093 1367 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
HNF4AP41235 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC5.94□□□□□ -1.46
HNF4AP41235 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC5.94□□□□□ -1.46
HNF4AP41235 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
HNF4AP41235 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
HNF4AP41235 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC5.94□□□□□ -1.46
HNF4AP41235 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC5.94□□□□□ -1.46
HNF4AP41235 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
HNF4AP41235 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC5.94□□□□□ -1.46
HNF4AP41235 AC004656.1-201ENST00000568479 4951 ntBASIC5.94□□□□□ -1.46
HNF4AP41235 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC5.94□□□□□ -1.46
HNF4AP41235 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC5.94□□□□□ -1.46
HNF4AP41235 MIR188-201ENST00000385034 86 ntBASIC5.94□□□□□ -1.46
HNF4AP41235 RPL23AP17-201ENST00000401064 499 ntBASIC5.94□□□□□ -1.46
HNF4AP41235 AL359885.1-201ENST00000415786 903 ntBASIC5.94□□□□□ -1.46
HNF4AP41235 LINC00317-201ENST00000419069 612 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
HNF4AP41235 AL354707.3-201ENST00000427308 331 ntBASIC5.94□□□□□ -1.46
HNF4AP41235 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
HNF4AP41235 OR3D1P-201ENST00000438288 955 ntBASIC5.94□□□□□ -1.46
HNF4AP41235 CATSPER2P1-205ENST00000446479 419 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
HNF4AP41235 AL445687.2-201ENST00000458156 728 ntBASIC5.94□□□□□ -1.46
HNF4AP41235 RN7SL352P-201ENST00000466002 277 ntBASIC5.94□□□□□ -1.46
HNF4AP41235 SLC25A51P1-201ENST00000468432 871 ntBASIC5.94□□□□□ -1.46
HNF4AP41235 RPL12P30-201ENST00000488389 499 ntBASIC5.94□□□□□ -1.46
HNF4AP41235 RN7SL568P-201ENST00000493069 298 ntBASIC5.94□□□□□ -1.46
HNF4AP41235 AC008413.2-201ENST00000507398 342 ntTSL 3 BASIC5.94□□□□□ -1.46
HNF4AP41235 AC095052.1-201ENST00000509955 863 ntBASIC5.94□□□□□ -1.46
HNF4AP41235 APOBEC3AP1-201ENST00000511396 287 ntBASIC5.94□□□□□ -1.46
HNF4AP41235 HMGN1P17-201ENST00000513734 295 ntBASIC5.94□□□□□ -1.46
HNF4AP41235 TPT1-AS1-207ENST00000520310 563 ntTSL 5 BASIC5.94□□□□□ -1.46
HNF4AP41235 TMEM68-213ENST00000522576 826 ntTSL 2 BASIC5.94□□□□□ -1.46
HNF4AP41235 AP000859.1-201ENST00000525536 307 ntBASIC5.94□□□□□ -1.46
HNF4AP41235 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
HNF4AP41235 AL157871.6-201ENST00000553954 206 ntTSL 2 BASIC5.94□□□□□ -1.46
HNF4AP41235 AC116158.2-201ENST00000559544 553 ntTSL 4 BASIC5.94□□□□□ -1.46
HNF4AP41235 AC022872.1-201ENST00000568391 781 ntTSL 2 BASIC5.94□□□□□ -1.46
HNF4AP41235 AC024361.3-201ENST00000570919 333 ntTSL 5 BASIC5.94□□□□□ -1.46
HNF4AP41235 SNORD39.2-201ENST00000579995 76 ntBASIC5.94□□□□□ -1.46
HNF4AP41235 RN7SL230P-201ENST00000580835 303 ntBASIC5.94□□□□□ -1.46
HNF4AP41235 AP001823.1-201ENST00000604056 1003 ntBASIC5.94□□□□□ -1.46
HNF4AP41235 AC008555.7-201ENST00000605008 583 ntBASIC5.94□□□□□ -1.46
HNF4AP41235 AC004890.3-201ENST00000605566 1095 ntBASIC5.94□□□□□ -1.46
HNF4AP41235 SMAGP-208ENST00000605627 577 ntTSL 5 BASIC5.94□□□□□ -1.46
HNF4AP41235 MIR6780B-201ENST00000610307 79 ntBASIC5.94□□□□□ -1.46
HNF4AP41235 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC5.94□□□□□ -1.46
HNF4AP41235 CKLF-CMTM1-206ENST00000616804 678 ntAPPRIS ALT2 TSL 2 BASIC5.94□□□□□ -1.46
HNF4AP41235 COPS7B-225ENST00000631349 189 ntTSL 5 BASIC5.94□□□□□ -1.46
HNF4AP41235 TTC33-206ENST00000636863 1149 ntTSL 5 BASIC5.94□□□□□ -1.46
HNF4AP41235 AL592429.1-201ENST00000403909 1473 ntBASIC5.94□□□□□ -1.46
HNF4AP41235 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
HNF4AP41235 AC024587.1-201ENST00000505925 2157 ntBASIC5.94□□□□□ -1.46
HNF4AP41235 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
HNF4AP41235 LINC00343-202ENST00000415294 1320 ntTSL 5 BASIC5.94□□□□□ -1.46
HNF4AP41235 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC5.94□□□□□ -1.46
HNF4AP41235 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
HNF4AP41235 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC5.94□□□□□ -1.46
HNF4AP41235 MLH1-206ENST00000435176 2428 ntTSL 2 BASIC5.94□□□□□ -1.46
HNF4AP41235 KIF27-202ENST00000334204 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
HNF4AP41235 SMG1-201ENST00000330588 1588 ntTSL 5 BASIC5.93□□□□□ -1.46
HNF4AP41235 AC007491.1-202ENST00000637961 1576 ntTSL 5 BASIC5.93□□□□□ -1.46
HNF4AP41235 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
HNF4AP41235 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC5.93□□□□□ -1.46
HNF4AP41235 AC015799.1-201ENST00000622996 3122 ntBASIC5.93□□□□□ -1.46
HNF4AP41235 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
HNF4AP41235 AC125336.1-201ENST00000508893 2827 ntBASIC5.93□□□□□ -1.46
HNF4AP41235 CLC-201ENST00000221804 635 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 96.5 ms