Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
RFC3P40938 CCAR1-201ENST00000265872 4683 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
RFC3P40938 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC5.54□□□□□ -1.52
RFC3P40938 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC5.54□□□□□ -1.52
RFC3P40938 PHEX-AS1-201ENST00000424650 1906 ntTSL 2 BASIC5.54□□□□□ -1.52
RFC3P40938 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC5.54□□□□□ -1.52
RFC3P40938 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
RFC3P40938 MDM4-217ENST00000621032 5592 ntTSL 2 BASIC5.54□□□□□ -1.52
RFC3P40938 AC005480.1-202ENST00000555916 3548 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
RFC3P40938 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
RFC3P40938 PGBD4-201ENST00000397766 6612 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
RFC3P40938 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
RFC3P40938 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC5.54□□□□□ -1.52
RFC3P40938 CCNB1IP1P1-201ENST00000428976 839 ntBASIC5.54□□□□□ -1.52
RFC3P40938 RPL5P2-201ENST00000429598 854 ntBASIC5.54□□□□□ -1.52
RFC3P40938 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC5.54□□□□□ -1.52
RFC3P40938 NDUFS5P5-201ENST00000437256 321 ntBASIC5.54□□□□□ -1.52
RFC3P40938 PCBP2P1-201ENST00000437262 977 ntBASIC5.54□□□□□ -1.52
RFC3P40938 AL359644.1-204ENST00000440807 440 ntTSL 3 BASIC5.54□□□□□ -1.52
RFC3P40938 AL355355.1-201ENST00000442900 793 ntBASIC5.54□□□□□ -1.52
RFC3P40938 OR2AF1P-201ENST00000454899 889 ntBASIC5.54□□□□□ -1.52
RFC3P40938 OR2A1-AS1-202ENST00000467944 422 ntBASIC5.54□□□□□ -1.52
RFC3P40938 UBFD1P1-201ENST00000473259 814 ntBASIC5.54□□□□□ -1.52
RFC3P40938 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC5.54□□□□□ -1.52
RFC3P40938 RN7SL193P-201ENST00000491708 276 ntBASIC5.54□□□□□ -1.52
RFC3P40938 PSMA2P2-201ENST00000504319 686 ntBASIC5.54□□□□□ -1.52
RFC3P40938 SNORD46.2-201ENST00000516021 102 ntBASIC5.54□□□□□ -1.52
RFC3P40938 RNA5SP271-201ENST00000516700 88 ntBASIC5.54□□□□□ -1.52
RFC3P40938 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC5.54□□□□□ -1.52
RFC3P40938 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC5.54□□□□□ -1.52
RFC3P40938 LINC00921-201ENST00000572123 243 ntTSL 5 BASIC5.54□□□□□ -1.52
RFC3P40938 AC087501.3-201ENST00000576477 513 ntTSL 5 BASIC5.54□□□□□ -1.52
RFC3P40938 LSM1P2-201ENST00000604911 322 ntBASIC5.54□□□□□ -1.52
RFC3P40938 AC141002.1-201ENST00000607025 279 ntBASIC5.54□□□□□ -1.52
RFC3P40938 AC093388.1-201ENST00000609166 430 ntBASIC5.54□□□□□ -1.52
RFC3P40938 AL445465.1-206ENST00000609544 528 ntTSL 5 BASIC5.54□□□□□ -1.52
RFC3P40938 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC5.54□□□□□ -1.52
RFC3P40938 AC239809.3-202ENST00000628902 686 ntTSL 5 BASIC5.54□□□□□ -1.52
RFC3P40938 AC022726.2-201ENST00000634673 547 ntBASIC5.54□□□□□ -1.52
RFC3P40938 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC5.54□□□□□ -1.52
RFC3P40938 FMN1-212ENST00000616417 13529 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
RFC3P40938 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
RFC3P40938 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
RFC3P40938 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC5.54□□□□□ -1.52
RFC3P40938 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
RFC3P40938 RAPGEF4-204ENST00000409036 3975 ntTSL 5 BASIC5.54□□□□□ -1.52
RFC3P40938 C3orf35-203ENST00000425564 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
RFC3P40938 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC5.54□□□□□ -1.52
RFC3P40938 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
RFC3P40938 ATP2C1-203ENST00000422190 3386 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
RFC3P40938 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
RFC3P40938 GABRA3-204ENST00000535043 1697 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
RFC3P40938 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC5.53□□□□□ -1.52
RFC3P40938 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC5.53□□□□□ -1.52
RFC3P40938 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC5.53□□□□□ -1.52
RFC3P40938 SLC41A2-201ENST00000258538 4449 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
RFC3P40938 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC5.53□□□□□ -1.52
RFC3P40938 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC5.53□□□□□ -1.52
RFC3P40938 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC5.53□□□□□ -1.52
RFC3P40938 PSMA3-201ENST00000216455 970 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
RFC3P40938 OR7G2-201ENST00000305456 1038 ntAPPRIS P2 BASIC5.53□□□□□ -1.52
RFC3P40938 OR4D5-201ENST00000307033 1095 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
RFC3P40938 OR2L2-201ENST00000366479 1134 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
RFC3P40938 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
RFC3P40938 AL031985.1-201ENST00000392713 418 ntBASIC5.53□□□□□ -1.52
RFC3P40938 AL360271.1-201ENST00000395679 510 ntBASIC5.53□□□□□ -1.52
RFC3P40938 PEX12P1-201ENST00000400284 1048 ntBASIC5.53□□□□□ -1.52
RFC3P40938 AL096711.1-201ENST00000404780 554 ntBASIC5.53□□□□□ -1.52
RFC3P40938 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC5.53□□□□□ -1.52
RFC3P40938 AC009506.2-201ENST00000420635 840 ntBASIC5.53□□□□□ -1.52
RFC3P40938 CFL1P4-201ENST00000451536 498 ntBASIC5.53□□□□□ -1.52
RFC3P40938 AC079896.1-201ENST00000455845 488 ntTSL 3 BASIC5.53□□□□□ -1.52
RFC3P40938 RPL7P51-201ENST00000490532 749 ntBASIC5.53□□□□□ -1.52
RFC3P40938 LINC02217-201ENST00000505844 687 ntTSL 2 BASIC5.53□□□□□ -1.52
RFC3P40938 USP17L23-201ENST00000506619 551 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
RFC3P40938 MTATP6P1-201ENST00000514057 681 ntBASIC5.53□□□□□ -1.52
RFC3P40938 AZIN1-AS1-208ENST00000519257 619 ntTSL 3 BASIC5.53□□□□□ -1.52
RFC3P40938 AC022826.1-201ENST00000519383 805 ntBASIC5.53□□□□□ -1.52
RFC3P40938 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC5.53□□□□□ -1.52
RFC3P40938 TNFRSF17-201ENST00000053243 994 ntAPPRIS P2 TSL 1 (best) BASIC5.53□□□□□ -1.52
RFC3P40938 RPA2P3-201ENST00000533268 770 ntBASIC5.53□□□□□ -1.52
RFC3P40938 STARD6-202ENST00000577499 696 ntTSL 2 BASIC5.53□□□□□ -1.52
RFC3P40938 AC090236.2-201ENST00000587933 1101 ntBASIC5.53□□□□□ -1.52
RFC3P40938 NPIPB1P-202ENST00000588786 828 ntBASIC5.53□□□□□ -1.52
RFC3P40938 SETSIP-202ENST00000596516 909 ntAPPRIS P2 BASIC5.53□□□□□ -1.52
RFC3P40938 AL021918.2-201ENST00000613415 194 ntBASIC5.53□□□□□ -1.52
RFC3P40938 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC5.53□□□□□ -1.52
RFC3P40938 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC5.53□□□□□ -1.52
RFC3P40938 AL009031.1-202ENST00000632370 886 ntTSL 3 BASIC5.53□□□□□ -1.52
RFC3P40938 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC5.53□□□□□ -1.52
RFC3P40938 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC5.53□□□□□ -1.52
RFC3P40938 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
RFC3P40938 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC5.53□□□□□ -1.52
RFC3P40938 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC5.53□□□□□ -1.52
RFC3P40938 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC5.53□□□□□ -1.52
RFC3P40938 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
RFC3P40938 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
RFC3P40938 HDAC1P2-201ENST00000453661 1398 ntBASIC5.53□□□□□ -1.52
RFC3P40938 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
RFC3P40938 MOCS2-201ENST00000361377 3568 ntTSL 4 BASIC5.52□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 89.3 ms