Protein–RNA interactions for Protein: P34897

SHMT2, Serine hydroxymethyltransferase, mitochondrial, humanhuman

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2P34897 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC5.82□□□□□ -1.48
SHMT2P34897 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC5.82□□□□□ -1.48
SHMT2P34897 HMGN1P2-201ENST00000445197 310 ntBASIC5.82□□□□□ -1.48
SHMT2P34897 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC5.82□□□□□ -1.48
SHMT2P34897 CST12P-201ENST00000457644 362 ntBASIC5.82□□□□□ -1.48
SHMT2P34897 AC104164.1-201ENST00000460282 590 ntBASIC5.82□□□□□ -1.48
SHMT2P34897 SELENOT-204ENST00000480740 783 ntTSL 3 BASIC5.82□□□□□ -1.48
SHMT2P34897 AC124945.1-201ENST00000485133 188 ntBASIC5.82□□□□□ -1.48
SHMT2P34897 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC5.82□□□□□ -1.48
SHMT2P34897 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC5.82□□□□□ -1.48
SHMT2P34897 H2AFV-208ENST00000521529 439 ntTSL 5 BASIC5.82□□□□□ -1.48
SHMT2P34897 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC5.82□□□□□ -1.48
SHMT2P34897 ASB8-203ENST00000535988 679 ntTSL 2 BASIC5.82□□□□□ -1.48
SHMT2P34897 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC5.82□□□□□ -1.48
SHMT2P34897 AC011601.1-201ENST00000549710 577 ntTSL 3 BASIC5.82□□□□□ -1.48
SHMT2P34897 NPM1P42-201ENST00000560329 862 ntBASIC5.82□□□□□ -1.48
SHMT2P34897 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC5.82□□□□□ -1.48
SHMT2P34897 AC005726.4-201ENST00000582858 458 ntBASIC5.82□□□□□ -1.48
SHMT2P34897 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC5.82□□□□□ -1.48
SHMT2P34897 AC108673.3-201ENST00000609183 335 ntBASIC5.82□□□□□ -1.48
SHMT2P34897 MIR6793-201ENST00000612376 63 ntBASIC5.82□□□□□ -1.48
SHMT2P34897 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC5.82□□□□□ -1.48
SHMT2P34897 AL136228.1-201ENST00000622221 319 ntBASIC5.82□□□□□ -1.48
SHMT2P34897 MIR1910-201ENST00000636955 80 ntBASIC5.82□□□□□ -1.48
SHMT2P34897 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
SHMT2P34897 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC5.82□□□□□ -1.48
SHMT2P34897 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
SHMT2P34897 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
SHMT2P34897 SUCLG1-201ENST00000393868 1475 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
SHMT2P34897 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
SHMT2P34897 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC5.82□□□□□ -1.48
SHMT2P34897 PAPD4-203ENST00000428308 2204 ntAPPRIS P3 TSL 2 BASIC5.82□□□□□ -1.48
SHMT2P34897 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC5.82□□□□□ -1.48
SHMT2P34897 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC5.82□□□□□ -1.48
SHMT2P34897 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
SHMT2P34897 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
SHMT2P34897 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
SHMT2P34897 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
SHMT2P34897 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
SHMT2P34897 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
SHMT2P34897 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
SHMT2P34897 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC5.81□□□□□ -1.48
SHMT2P34897 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC5.81□□□□□ -1.48
SHMT2P34897 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
SHMT2P34897 PSG10P-201ENST00000501199 1500 ntBASIC5.81□□□□□ -1.48
SHMT2P34897 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
SHMT2P34897 OR52B6-201ENST00000345043 1008 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
SHMT2P34897 MYL6P5-201ENST00000412707 459 ntBASIC5.81□□□□□ -1.48
SHMT2P34897 AC011752.1-203ENST00000417609 582 ntTSL 2 BASIC5.81□□□□□ -1.48
SHMT2P34897 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
SHMT2P34897 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC5.81□□□□□ -1.48
SHMT2P34897 PMCHL1-203ENST00000423301 697 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
SHMT2P34897 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC5.81□□□□□ -1.48
SHMT2P34897 PMCHL1-204ENST00000430902 659 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
SHMT2P34897 GAPDHP75-201ENST00000433910 943 ntBASIC5.81□□□□□ -1.48
SHMT2P34897 DCN-205ENST00000441303 519 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
SHMT2P34897 BMS1P10-201ENST00000443754 1120 ntBASIC5.81□□□□□ -1.48
SHMT2P34897 AL359839.1-201ENST00000451975 1160 ntBASIC5.81□□□□□ -1.48
SHMT2P34897 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
SHMT2P34897 SYPL1-205ENST00000470347 1193 ntTSL 3 BASIC5.81□□□□□ -1.48
SHMT2P34897 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC5.81□□□□□ -1.48
SHMT2P34897 AC010181.1-202ENST00000509191 798 ntTSL 3 BASIC5.81□□□□□ -1.48
SHMT2P34897 AC060775.1-201ENST00000518241 520 ntBASIC5.81□□□□□ -1.48
SHMT2P34897 WBP1LP3-201ENST00000523033 208 ntBASIC5.81□□□□□ -1.48
SHMT2P34897 OR4A42P-201ENST00000531397 938 ntBASIC5.81□□□□□ -1.48
SHMT2P34897 MIR132-201ENST00000591554 101 ntBASIC5.81□□□□□ -1.48
SHMT2P34897 AC003991.1-201ENST00000594469 484 ntTSL 5 BASIC5.81□□□□□ -1.48
SHMT2P34897 MIR6809-201ENST00000612189 116 ntBASIC5.81□□□□□ -1.48
SHMT2P34897 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC5.81□□□□□ -1.48
SHMT2P34897 AC099506.1-201ENST00000567359 4037 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
SHMT2P34897 CLEC1A-204ENST00000457018 1686 ntAPPRIS ALT2 TSL 2 BASIC5.81□□□□□ -1.48
SHMT2P34897 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
SHMT2P34897 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC5.81□□□□□ -1.48
SHMT2P34897 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
SHMT2P34897 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC5.81□□□□□ -1.48
SHMT2P34897 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
SHMT2P34897 THAP12P9-201ENST00000503971 2360 ntBASIC5.8□□□□□ -1.48
SHMT2P34897 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
SHMT2P34897 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
SHMT2P34897 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
SHMT2P34897 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC5.8□□□□□ -1.48
SHMT2P34897 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
SHMT2P34897 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC5.8□□□□□ -1.48
SHMT2P34897 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
SHMT2P34897 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
SHMT2P34897 RNFT1P3-201ENST00000340898 1052 ntBASIC5.8□□□□□ -1.48
SHMT2P34897 AC090616.2-201ENST00000358484 431 ntTSL 3 BASIC5.8□□□□□ -1.48
SHMT2P34897 DNAJA1P3-201ENST00000399417 1194 ntBASIC5.8□□□□□ -1.48
SHMT2P34897 AC016739.1-201ENST00000405359 345 ntBASIC5.8□□□□□ -1.48
SHMT2P34897 HSD17B7P1-201ENST00000412419 1017 ntBASIC5.8□□□□□ -1.48
SHMT2P34897 RPL35AP3-201ENST00000414680 288 ntBASIC5.8□□□□□ -1.48
SHMT2P34897 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC5.8□□□□□ -1.48
SHMT2P34897 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC5.8□□□□□ -1.48
SHMT2P34897 ICA1L-210ENST00000425178 879 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
SHMT2P34897 GAPDHP34-201ENST00000432112 823 ntBASIC5.8□□□□□ -1.48
SHMT2P34897 MAJIN-202ENST00000432175 838 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
SHMT2P34897 AL731534.1-201ENST00000434711 269 ntBASIC5.8□□□□□ -1.48
SHMT2P34897 DNAJA1P5-201ENST00000440278 943 ntBASIC5.8□□□□□ -1.48
SHMT2P34897 AL158850.1-201ENST00000441249 914 ntTSL 3 BASIC5.8□□□□□ -1.48
SHMT2P34897 RPS10P18-201ENST00000442662 495 ntBASIC5.8□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 68.3 ms