Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
HOXC12P31275 INTS6-203ENST00000442263 15428 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
HOXC12P31275 TC2N-202ENST00000360594 3751 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
HOXC12P31275 SERPINA9-205ENST00000448305 1520 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
HOXC12P31275 AC022507.1-201ENST00000548349 1505 ntBASIC6.49□□□□□ -1.37
HOXC12P31275 ZNF90-201ENST00000418063 2310 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
HOXC12P31275 LINC02203-204ENST00000628444 2323 ntTSL 2 BASIC6.49□□□□□ -1.37
HOXC12P31275 ZNF402P-201ENST00000404435 3100 ntBASIC6.49□□□□□ -1.37
HOXC12P31275 C16orf62-202ENST00000417362 3115 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
HOXC12P31275 MAPK10-383ENST00000642032 3390 ntBASIC6.49□□□□□ -1.37
HOXC12P31275 ZYG11B-201ENST00000294353 8093 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
HOXC12P31275 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC6.49□□□□□ -1.37
HOXC12P31275 AL512353.3-201ENST00000417517 1326 ntBASIC6.49□□□□□ -1.37
HOXC12P31275 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
HOXC12P31275 ZNF544-206ENST00000596652 2818 ntAPPRIS P3 TSL 1 (best) BASIC6.49□□□□□ -1.37
HOXC12P31275 TRIM16-212ENST00000578237 3206 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
HOXC12P31275 ZMYM6-203ENST00000373333 1473 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
HOXC12P31275 PDGFRA-201ENST00000257290 6576 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
HOXC12P31275 SCRN1-202ENST00000409497 1732 ntAPPRIS P1 TSL 2 BASIC6.48□□□□□ -1.37
HOXC12P31275 Z96074.1-203ENST00000637685 1746 ntTSL 5 BASIC6.48□□□□□ -1.37
HOXC12P31275 OR2AG2-202ENST00000641124 4224 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
HOXC12P31275 OR2AG2-203ENST00000641169 4221 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
HOXC12P31275 TAF7L-203ENST00000372907 2341 ntAPPRIS P3 TSL 1 (best) BASIC6.48□□□□□ -1.37
HOXC12P31275 MTND4P26-201ENST00000415971 1359 ntBASIC6.48□□□□□ -1.37
HOXC12P31275 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
HOXC12P31275 AC093844.1-201ENST00000514910 1361 ntBASIC6.48□□□□□ -1.37
HOXC12P31275 TMEM209-206ENST00000473456 1961 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
HOXC12P31275 BCO2-203ENST00000438022 2598 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
HOXC12P31275 AL590705.5-202ENST00000375204 3161 ntTSL 2 BASIC6.48□□□□□ -1.37
HOXC12P31275 CORIN-201ENST00000273857 4852 ntAPPRIS P2 TSL 1 (best) BASIC6.48□□□□□ -1.37
HOXC12P31275 DCX-205ENST00000488120 2476 ntAPPRIS ALT1 TSL 1 (best) BASIC6.48□□□□□ -1.37
HOXC12P31275 UNC5D-201ENST00000287272 8662 ntTSL 5 BASIC6.48□□□□□ -1.37
HOXC12P31275 RNU6-553P-201ENST00000364047 96 ntBASIC6.48□□□□□ -1.37
HOXC12P31275 MIR551B-201ENST00000384984 96 ntBASIC6.48□□□□□ -1.37
HOXC12P31275 AL590084.2-201ENST00000401481 382 ntBASIC6.48□□□□□ -1.37
HOXC12P31275 AL591368.1-202ENST00000413050 548 ntTSL 3 BASIC6.48□□□□□ -1.37
HOXC12P31275 AL662791.3-201ENST00000413771 776 ntBASIC6.48□□□□□ -1.37
HOXC12P31275 VTA1P1-201ENST00000414044 866 ntBASIC6.48□□□□□ -1.37
HOXC12P31275 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC6.48□□□□□ -1.37
HOXC12P31275 AL390840.1-201ENST00000420303 988 ntBASIC6.48□□□□□ -1.37
HOXC12P31275 LMLN-AS1-201ENST00000423460 542 ntTSL 5 BASIC6.48□□□□□ -1.37
HOXC12P31275 ZNF880-203ENST00000424032 558 ntTSL 4 BASIC6.48□□□□□ -1.37
HOXC12P31275 CYP4F34P-201ENST00000425951 481 ntBASIC6.48□□□□□ -1.37
HOXC12P31275 GAPDHP51-201ENST00000426454 1000 ntBASIC6.48□□□□□ -1.37
HOXC12P31275 YWHAEP5-201ENST00000431545 765 ntBASIC6.48□□□□□ -1.37
HOXC12P31275 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC6.48□□□□□ -1.37
HOXC12P31275 AL365220.1-201ENST00000432923 399 ntBASIC6.48□□□□□ -1.37
HOXC12P31275 AC019211.1-201ENST00000432993 754 ntTSL 3 BASIC6.48□□□□□ -1.37
HOXC12P31275 AC245047.1-201ENST00000433276 873 ntBASIC6.48□□□□□ -1.37
HOXC12P31275 Z83313.1-201ENST00000433780 718 ntBASIC6.48□□□□□ -1.37
HOXC12P31275 YWHAZP7-201ENST00000436906 631 ntBASIC6.48□□□□□ -1.37
HOXC12P31275 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC6.48□□□□□ -1.37
HOXC12P31275 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC6.48□□□□□ -1.37
HOXC12P31275 AC002542.1-201ENST00000440683 193 ntBASIC6.48□□□□□ -1.37
HOXC12P31275 RHEBP1-201ENST00000448647 556 ntBASIC6.48□□□□□ -1.37
HOXC12P31275 AC009244.1-201ENST00000450566 258 ntBASIC6.48□□□□□ -1.37
HOXC12P31275 CALM1P2-201ENST00000452941 448 ntBASIC6.48□□□□□ -1.37
HOXC12P31275 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC6.48□□□□□ -1.37
HOXC12P31275 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC6.48□□□□□ -1.37
HOXC12P31275 XACT-201ENST00000468762 497 ntTSL 5 BASIC6.48□□□□□ -1.37
HOXC12P31275 AP000805.1-201ENST00000471604 784 ntBASIC6.48□□□□□ -1.37
HOXC12P31275 RN7SL688P-201ENST00000471754 275 ntBASIC6.48□□□□□ -1.37
HOXC12P31275 AC011979.1-201ENST00000472300 483 ntBASIC6.48□□□□□ -1.37
HOXC12P31275 RPS4XP17-201ENST00000479057 754 ntBASIC6.48□□□□□ -1.37
HOXC12P31275 RN7SL267P-201ENST00000485107 261 ntBASIC6.48□□□□□ -1.37
HOXC12P31275 MRPL57P6-201ENST00000506570 309 ntBASIC6.48□□□□□ -1.37
HOXC12P31275 AC025176.1-201ENST00000510261 365 ntTSL 4 BASIC6.48□□□□□ -1.37
HOXC12P31275 AC020980.1-201ENST00000513041 458 ntTSL 5 BASIC6.48□□□□□ -1.37
HOXC12P31275 LINC01950-202ENST00000513273 572 ntTSL 2 BASIC6.48□□□□□ -1.37
HOXC12P31275 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC6.48□□□□□ -1.37
HOXC12P31275 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC6.48□□□□□ -1.37
HOXC12P31275 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
HOXC12P31275 OR6M3P-201ENST00000531567 700 ntBASIC6.48□□□□□ -1.37
HOXC12P31275 EGLN3P1-201ENST00000541727 720 ntBASIC6.48□□□□□ -1.37
HOXC12P31275 AL391156.1-201ENST00000554965 554 ntBASIC6.48□□□□□ -1.37
HOXC12P31275 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC6.48□□□□□ -1.37
HOXC12P31275 WDR61-205ENST00000558459 884 ntTSL 3 BASIC6.48□□□□□ -1.37
HOXC12P31275 AC027104.1-201ENST00000563702 681 ntBASIC6.48□□□□□ -1.37
HOXC12P31275 AC024361.3-201ENST00000570919 333 ntTSL 5 BASIC6.48□□□□□ -1.37
HOXC12P31275 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC6.48□□□□□ -1.37
HOXC12P31275 KCNMA1-AS1-204ENST00000595702 504 ntTSL 5 BASIC6.48□□□□□ -1.37
HOXC12P31275 DEFB131E-202ENST00000602581 683 ntBASIC6.48□□□□□ -1.37
HOXC12P31275 AC080078.2-201ENST00000603766 501 ntBASIC6.48□□□□□ -1.37
HOXC12P31275 AC064872.1-201ENST00000604823 1072 ntBASIC6.48□□□□□ -1.37
HOXC12P31275 AL136139.1-201ENST00000605568 222 ntBASIC6.48□□□□□ -1.37
HOXC12P31275 LINC02112-203ENST00000606169 419 ntTSL 5 BASIC6.48□□□□□ -1.37
HOXC12P31275 AC072039.2-201ENST00000608883 439 ntBASIC6.48□□□□□ -1.37
HOXC12P31275 AC245297.2-201ENST00000610119 565 ntBASIC6.48□□□□□ -1.37
HOXC12P31275 AL121809.2-201ENST00000613169 341 ntBASIC6.48□□□□□ -1.37
HOXC12P31275 AC244100.1-201ENST00000618141 407 ntTSL 5 BASIC6.48□□□□□ -1.37
HOXC12P31275 AL590396.3-201ENST00000636334 300 ntBASIC6.48□□□□□ -1.37
HOXC12P31275 AC008040.1-202ENST00000483289 6251 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
HOXC12P31275 HKR1-223ENST00000591471 3472 ntTSL 2 BASIC6.48□□□□□ -1.37
HOXC12P31275 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
HOXC12P31275 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC6.48□□□□□ -1.37
HOXC12P31275 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC6.48□□□□□ -1.37
HOXC12P31275 AP002004.1-203ENST00000531091 1768 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
HOXC12P31275 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC6.48□□□□□ -1.37
HOXC12P31275 AC069222.1-201ENST00000608028 3360 ntBASIC6.48□□□□□ -1.37
HOXC12P31275 CAP1P2-201ENST00000417455 1409 ntBASIC6.48□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 62.8 ms