Protein–RNA interactions for Protein: P31269

HOXA9, Homeobox protein Hox-A9, humanhuman

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9P31269 AL022331.1-201ENST00000429025 477 ntBASIC6.22□□□□□ -1.41
HOXA9P31269 AL049649.1-201ENST00000444792 1105 ntTSL 5 BASIC6.22□□□□□ -1.41
HOXA9P31269 LINC01780-202ENST00000457683 391 ntTSL 3 BASIC6.22□□□□□ -1.41
HOXA9P31269 AC018450.1-202ENST00000465880 529 ntTSL 4 BASIC6.22□□□□□ -1.41
HOXA9P31269 RN7SL352P-201ENST00000466002 277 ntBASIC6.22□□□□□ -1.41
HOXA9P31269 AC139720.1-201ENST00000509497 512 ntTSL 3 BASIC6.22□□□□□ -1.41
HOXA9P31269 AC109361.2-202ENST00000512514 483 ntTSL 3 BASIC6.22□□□□□ -1.41
HOXA9P31269 IGKV2-18-201ENST00000522607 343 ntBASIC6.22□□□□□ -1.41
HOXA9P31269 AC011601.1-201ENST00000549710 577 ntTSL 3 BASIC6.22□□□□□ -1.41
HOXA9P31269 AC051619.2-201ENST00000559063 397 ntBASIC6.22□□□□□ -1.41
HOXA9P31269 AC136944.1-201ENST00000567464 560 ntTSL 5 BASIC6.22□□□□□ -1.41
HOXA9P31269 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC6.22□□□□□ -1.41
HOXA9P31269 AC103810.5-201ENST00000581622 560 ntTSL 5 BASIC6.22□□□□□ -1.41
HOXA9P31269 AC008770.4-201ENST00000586394 468 ntTSL 3 BASIC6.22□□□□□ -1.41
HOXA9P31269 AC013244.1-201ENST00000604279 193 ntBASIC6.22□□□□□ -1.41
HOXA9P31269 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC6.22□□□□□ -1.41
HOXA9P31269 AC087565.3-203ENST00000641018 837 ntBASIC6.22□□□□□ -1.41
HOXA9P31269 AL662795.2-201ENST00000624252 3706 ntBASIC6.22□□□□□ -1.41
HOXA9P31269 LMO3-202ENST00000320122 3759 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
HOXA9P31269 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
HOXA9P31269 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
HOXA9P31269 ZNF658B-201ENST00000602828 3408 ntBASIC6.22□□□□□ -1.41
HOXA9P31269 TRAF5-201ENST00000261464 3972 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
HOXA9P31269 AL049634.1-201ENST00000453770 1720 ntBASIC6.22□□□□□ -1.41
HOXA9P31269 ZNF24-201ENST00000261332 6307 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
HOXA9P31269 DMXL1-215ENST00000539542 11236 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
HOXA9P31269 ZNF292-201ENST00000339907 8287 ntAPPRIS ALT1 TSL 5 BASIC6.21□□□□□ -1.41
HOXA9P31269 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC6.21□□□□□ -1.41
HOXA9P31269 FANCD2-205ENST00000431693 2450 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
HOXA9P31269 UBR4-204ENST00000375254 15906 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
HOXA9P31269 ZSCAN4-201ENST00000318203 2246 ntAPPRIS P1 TSL 2 BASIC6.21□□□□□ -1.42
HOXA9P31269 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
HOXA9P31269 RNA5SP211-201ENST00000365516 117 ntBASIC6.21□□□□□ -1.42
HOXA9P31269 G6PC2-202ENST00000375363 1214 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
HOXA9P31269 SULT6B1-201ENST00000407963 902 ntTSL 5 BASIC6.21□□□□□ -1.42
HOXA9P31269 AL596448.1-201ENST00000415024 392 ntBASIC6.21□□□□□ -1.42
HOXA9P31269 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC6.21□□□□□ -1.42
HOXA9P31269 RPS4XP5-201ENST00000419038 768 ntBASIC6.21□□□□□ -1.42
HOXA9P31269 MED4-AS1-201ENST00000422483 542 ntTSL 2 BASIC6.21□□□□□ -1.42
HOXA9P31269 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC6.21□□□□□ -1.42
HOXA9P31269 Z84478.1-201ENST00000438230 1219 ntBASIC6.21□□□□□ -1.42
HOXA9P31269 AL163193.1-201ENST00000444895 788 ntBASIC6.21□□□□□ -1.42
HOXA9P31269 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC6.21□□□□□ -1.42
HOXA9P31269 AC008080.2-201ENST00000455149 577 ntTSL 4 BASIC6.21□□□□□ -1.42
HOXA9P31269 AC110749.1-201ENST00000462007 357 ntBASIC6.21□□□□□ -1.42
HOXA9P31269 AC022215.1-201ENST00000481770 362 ntBASIC6.21□□□□□ -1.42
HOXA9P31269 AC109439.2-201ENST00000502421 564 ntTSL 4 BASIC6.21□□□□□ -1.42
HOXA9P31269 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC6.21□□□□□ -1.42
HOXA9P31269 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC6.21□□□□□ -1.42
HOXA9P31269 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC6.21□□□□□ -1.42
HOXA9P31269 BLOC1S6-209ENST00000565409 616 ntTSL 4 BASIC6.21□□□□□ -1.42
HOXA9P31269 LINC00921-201ENST00000572123 243 ntTSL 5 BASIC6.21□□□□□ -1.42
HOXA9P31269 SUMO2P15-201ENST00000604285 278 ntBASIC6.21□□□□□ -1.42
HOXA9P31269 AP000864.1-201ENST00000609424 650 ntBASIC6.21□□□□□ -1.42
HOXA9P31269 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC6.21□□□□□ -1.42
HOXA9P31269 CU639417.4-201ENST00000623928 207 ntBASIC6.21□□□□□ -1.42
HOXA9P31269 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC6.21□□□□□ -1.42
HOXA9P31269 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
HOXA9P31269 CASC11-201ENST00000502463 3301 ntTSL 2 BASIC6.21□□□□□ -1.42
HOXA9P31269 RPL37-201ENST00000274242 7686 ntAPPRIS P2 TSL 1 (best) BASIC6.21□□□□□ -1.42
HOXA9P31269 ANLN-202ENST00000396068 4661 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
HOXA9P31269 FBXO3-213ENST00000534136 3217 ntTSL 5 BASIC6.21□□□□□ -1.42
HOXA9P31269 SEPT7-AS1-203ENST00000437235 3810 ntTSL 5 BASIC6.21□□□□□ -1.42
HOXA9P31269 TNKS-206ENST00000518281 3897 ntTSL 2 BASIC6.21□□□□□ -1.42
HOXA9P31269 OR51I2-202ENST00000641930 3302 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
HOXA9P31269 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
HOXA9P31269 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
HOXA9P31269 AC005480.1-202ENST00000555916 3548 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
HOXA9P31269 CLEC4E-201ENST00000299663 2159 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
HOXA9P31269 AC105749.1-201ENST00000631338 2008 ntBASIC6.2□□□□□ -1.42
HOXA9P31269 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC6.2□□□□□ -1.42
HOXA9P31269 ZEB2-244ENST00000638007 9140 ntTSL 5 BASIC6.2□□□□□ -1.42
HOXA9P31269 IFIT2-201ENST00000371826 3489 ntAPPRIS P2 TSL 1 (best) BASIC6.2□□□□□ -1.42
HOXA9P31269 APOL6-201ENST00000409652 10121 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
HOXA9P31269 ERAP2-202ENST00000437043 5705 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
HOXA9P31269 AMELX-201ENST00000348912 737 ntTSL 5 BASIC6.2□□□□□ -1.42
HOXA9P31269 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
HOXA9P31269 AP003170.5-201ENST00000397185 335 ntBASIC6.2□□□□□ -1.42
HOXA9P31269 MYL6P5-201ENST00000412707 459 ntBASIC6.2□□□□□ -1.42
HOXA9P31269 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC6.2□□□□□ -1.42
HOXA9P31269 MRPL53P1-201ENST00000414323 319 ntBASIC6.2□□□□□ -1.42
HOXA9P31269 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC6.2□□□□□ -1.42
HOXA9P31269 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC6.2□□□□□ -1.42
HOXA9P31269 LINC01798-204ENST00000433396 682 ntTSL 3 BASIC6.2□□□□□ -1.42
HOXA9P31269 AL031963.1-201ENST00000447644 695 ntTSL 3 BASIC6.2□□□□□ -1.42
HOXA9P31269 EIF4A1P6-201ENST00000448133 1210 ntBASIC6.2□□□□□ -1.42
HOXA9P31269 AL731661.2-201ENST00000448824 806 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
HOXA9P31269 AC112187.1-201ENST00000455837 479 ntBASIC6.2□□□□□ -1.42
HOXA9P31269 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC6.2□□□□□ -1.42
HOXA9P31269 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC6.2□□□□□ -1.42
HOXA9P31269 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC6.2□□□□□ -1.42
HOXA9P31269 RNA5SP116-201ENST00000516132 98 ntBASIC6.2□□□□□ -1.42
HOXA9P31269 IGKV2-19-201ENST00000518132 283 ntBASIC6.2□□□□□ -1.42
HOXA9P31269 AC022469.1-201ENST00000555291 656 ntTSL 3 BASIC6.2□□□□□ -1.42
HOXA9P31269 C16orf52-205ENST00000567004 951 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
HOXA9P31269 MIR4260-201ENST00000583107 67 ntBASIC6.2□□□□□ -1.42
HOXA9P31269 AC119501.1-201ENST00000603646 475 ntBASIC6.2□□□□□ -1.42
HOXA9P31269 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC6.2□□□□□ -1.42
HOXA9P31269 AC069234.4-201ENST00000621276 412 ntBASIC6.2□□□□□ -1.42
HOXA9P31269 MKL2-202ENST00000571589 8799 ntAPPRIS ALT2 TSL 2 BASIC6.2□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 82.9 ms