Protein–RNA interactions for Protein: P29973

CNGA1, cGMP-gated cation channel alpha-1, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1P29973 MTCO3P22-201ENST00000603219 784 ntBASIC7.34□□□□□ -1.23
CNGA1P29973 AC104763.3-201ENST00000613765 618 ntBASIC7.34□□□□□ -1.23
CNGA1P29973 MIR1264-201ENST00000616374 69 ntBASIC7.34□□□□□ -1.23
CNGA1P29973 AC005277.2-201ENST00000617898 390 ntBASIC7.34□□□□□ -1.23
CNGA1P29973 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
CNGA1P29973 AL354718.1-201ENST00000619764 589 ntBASIC7.34□□□□□ -1.23
CNGA1P29973 AC090772.4-201ENST00000623599 362 ntBASIC7.34□□□□□ -1.23
CNGA1P29973 OR5D13-201ENST00000623930 945 ntAPPRIS P1 BASIC7.34□□□□□ -1.23
CNGA1P29973 KCNJ2-201ENST00000243457 5392 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
CNGA1P29973 RRH-201ENST00000317735 1455 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
CNGA1P29973 SP110-204ENST00000392048 1937 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
CNGA1P29973 OSBPL6-207ENST00000409631 3273 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
CNGA1P29973 CMAHP-202ENST00000377993 1681 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
CNGA1P29973 ST6GAL1-211ENST00000448044 4302 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
CNGA1P29973 AC010328.1-201ENST00000596769 4060 ntTSL 2 BASIC7.34□□□□□ -1.23
CNGA1P29973 SLC39A12-202ENST00000377371 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC7.34□□□□□ -1.23
CNGA1P29973 ANLN-202ENST00000396068 4661 ntTSL 1 (best) BASIC7.34□□□□□ -1.24
CNGA1P29973 MAPK1IP1L-201ENST00000395468 6480 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
CNGA1P29973 RPL31P11-201ENST00000426558 1558 ntBASIC7.33□□□□□ -1.24
CNGA1P29973 GYPA-214ENST00000641688 1764 ntAPPRIS ALT2 BASIC7.33□□□□□ -1.24
CNGA1P29973 STIL-201ENST00000337817 5087 ntAPPRIS ALT2 TSL 5 BASIC7.33□□□□□ -1.24
CNGA1P29973 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
CNGA1P29973 EIF3EP1-201ENST00000433978 1316 ntBASIC7.33□□□□□ -1.24
CNGA1P29973 AC078880.4-201ENST00000617627 1749 ntBASIC7.33□□□□□ -1.24
CNGA1P29973 TXNRD1-205ENST00000503506 3930 ntAPPRIS P2 TSL 1 (best) BASIC7.33□□□□□ -1.24
CNGA1P29973 TAOK1-202ENST00000536202 4068 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
CNGA1P29973 RIPK1-202ENST00000380409 3864 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
CNGA1P29973 MSANTD2-204ENST00000526629 3086 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
CNGA1P29973 SAMD9L-202ENST00000411955 5831 ntAPPRIS P1 TSL 5 BASIC7.33□□□□□ -1.24
CNGA1P29973 OR4Q3-201ENST00000331723 942 ntAPPRIS P1 BASIC7.33□□□□□ -1.24
CNGA1P29973 ZNF600-201ENST00000338230 3829 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
CNGA1P29973 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC7.33□□□□□ -1.24
CNGA1P29973 SDHAF3-201ENST00000360382 731 ntTSL 2 BASIC7.33□□□□□ -1.24
CNGA1P29973 AL031985.1-201ENST00000392713 418 ntBASIC7.33□□□□□ -1.24
CNGA1P29973 KLRC3-202ENST00000396439 1028 ntAPPRIS ALT2 TSL 5 BASIC7.33□□□□□ -1.24
CNGA1P29973 NACAP7-201ENST00000407371 609 ntBASIC7.33□□□□□ -1.24
CNGA1P29973 SLC20A1P1-201ENST00000413906 956 ntBASIC7.33□□□□□ -1.24
CNGA1P29973 AC017078.1-201ENST00000416146 368 ntBASIC7.33□□□□□ -1.24
CNGA1P29973 AL354824.1-201ENST00000424931 349 ntTSL 3 BASIC7.33□□□□□ -1.24
CNGA1P29973 AC113331.2-201ENST00000445557 926 ntAPPRIS P1 BASIC7.33□□□□□ -1.24
CNGA1P29973 AC022498.1-201ENST00000449845 696 ntTSL 3 BASIC7.33□□□□□ -1.24
CNGA1P29973 AL358612.1-201ENST00000452911 481 ntTSL 3 BASIC7.33□□□□□ -1.24
CNGA1P29973 HLA-DPA3-207ENST00000454398 229 ntBASIC7.33□□□□□ -1.24
CNGA1P29973 LINC01072-201ENST00000455848 431 ntTSL 3 BASIC7.33□□□□□ -1.24
CNGA1P29973 AC023194.2-201ENST00000465398 406 ntBASIC7.33□□□□□ -1.24
CNGA1P29973 AC078788.1-201ENST00000498457 634 ntTSL 3 BASIC7.33□□□□□ -1.24
CNGA1P29973 LSM3P4-201ENST00000502948 309 ntBASIC7.33□□□□□ -1.24
CNGA1P29973 AC131392.1-201ENST00000506490 633 ntBASIC7.33□□□□□ -1.24
CNGA1P29973 PKIA-AS1-201ENST00000519242 995 ntTSL 5 BASIC7.33□□□□□ -1.24
CNGA1P29973 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC7.33□□□□□ -1.24
CNGA1P29973 LECT2-205ENST00000522943 574 ntTSL 3 BASIC7.33□□□□□ -1.24
CNGA1P29973 AC068775.2-201ENST00000539033 998 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
CNGA1P29973 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC7.33□□□□□ -1.24
CNGA1P29973 AC093014.1-201ENST00000548926 724 ntBASIC7.33□□□□□ -1.24
CNGA1P29973 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC7.33□□□□□ -1.24
CNGA1P29973 AC106785.4-201ENST00000569492 412 ntBASIC7.33□□□□□ -1.24
CNGA1P29973 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC7.33□□□□□ -1.24
CNGA1P29973 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC7.33□□□□□ -1.24
CNGA1P29973 SMAGP-208ENST00000605627 577 ntTSL 5 BASIC7.33□□□□□ -1.24
CNGA1P29973 AC097504.2-201ENST00000608088 454 ntBASIC7.33□□□□□ -1.24
CNGA1P29973 AC005021.1-201ENST00000608730 355 ntBASIC7.33□□□□□ -1.24
CNGA1P29973 MKKS-203ENST00000609375 882 ntTSL 2 BASIC7.33□□□□□ -1.24
CNGA1P29973 AL355816.2-201ENST00000610049 647 ntBASIC7.33□□□□□ -1.24
CNGA1P29973 AC092266.1-201ENST00000610958 165 ntBASIC7.33□□□□□ -1.24
CNGA1P29973 AC007683.2-201ENST00000624681 714 ntBASIC7.33□□□□□ -1.24
CNGA1P29973 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC7.33□□□□□ -1.24
CNGA1P29973 TOR1AIP2-201ENST00000367612 7905 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
CNGA1P29973 RPL7L1-201ENST00000304734 3769 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
CNGA1P29973 AL596244.1-201ENST00000567068 3779 ntBASIC7.33□□□□□ -1.24
CNGA1P29973 ERMARD-202ENST00000366772 2003 ntTSL 5 BASIC7.33□□□□□ -1.24
CNGA1P29973 A1CF-206ENST00000395489 9517 ntTSL 2 BASIC7.33□□□□□ -1.24
CNGA1P29973 KCNQ3-205ENST00000621976 10659 ntAPPRIS ALT2 TSL 5 BASIC7.33□□□□□ -1.24
CNGA1P29973 OR7A10-202ENST00000641129 1847 ntAPPRIS P1 BASIC7.33□□□□□ -1.24
CNGA1P29973 AP000641.1-201ENST00000531988 1639 ntBASIC7.33□□□□□ -1.24
CNGA1P29973 AP004243.1-201ENST00000529108 1433 ntAPPRIS P1 TSL 5 BASIC7.33□□□□□ -1.24
CNGA1P29973 INHBA-AS1-203ENST00000422822 2312 ntTSL 2 BASIC7.33□□□□□ -1.24
CNGA1P29973 RASGRF1-201ENST00000394745 2850 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
CNGA1P29973 TLR7-201ENST00000380659 5011 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
CNGA1P29973 ZNF727-201ENST00000456806 1679 ntAPPRIS P1 TSL 4 BASIC7.32□□□□□ -1.24
CNGA1P29973 DMXL1-215ENST00000539542 11236 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
CNGA1P29973 GBA3-206ENST00000610628 2154 ntAPPRIS ALT2 TSL 5 BASIC7.32□□□□□ -1.24
CNGA1P29973 AL359195.2-201ENST00000623657 4412 ntBASIC7.32□□□□□ -1.24
CNGA1P29973 KLF18-201ENST00000634670 3159 ntAPPRIS P1 TSL 5 BASIC7.32□□□□□ -1.24
CNGA1P29973 HBG1-201ENST00000330597 808 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
CNGA1P29973 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
CNGA1P29973 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
CNGA1P29973 AL049697.3-201ENST00000406493 982 ntBASIC7.32□□□□□ -1.24
CNGA1P29973 RN7SKP108-201ENST00000411367 328 ntBASIC7.32□□□□□ -1.24
CNGA1P29973 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC7.32□□□□□ -1.24
CNGA1P29973 DSTNP5-201ENST00000427921 523 ntBASIC7.32□□□□□ -1.24
CNGA1P29973 AL049594.1-201ENST00000432834 805 ntTSL 3 BASIC7.32□□□□□ -1.24
CNGA1P29973 AC007179.2-206ENST00000434611 467 ntTSL 3 BASIC7.32□□□□□ -1.24
CNGA1P29973 AC094019.1-201ENST00000434678 472 ntBASIC7.32□□□□□ -1.24
CNGA1P29973 ATP5LP2-201ENST00000440646 311 ntBASIC7.32□□□□□ -1.24
CNGA1P29973 AL512785.1-201ENST00000447899 517 ntTSL 3 BASIC7.32□□□□□ -1.24
CNGA1P29973 PPIAP27-201ENST00000453800 265 ntBASIC7.32□□□□□ -1.24
CNGA1P29973 LINC01789-202ENST00000455614 491 ntTSL 3 BASIC7.32□□□□□ -1.24
CNGA1P29973 RN7SL205P-201ENST00000490174 284 ntBASIC7.32□□□□□ -1.24
CNGA1P29973 OR7E99P-201ENST00000505750 922 ntBASIC7.32□□□□□ -1.24
CNGA1P29973 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC7.32□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 107.4 ms