Protein–RNA interactions for Protein: P28068

HLA-DMB, HLA class II histocompatibility antigen, DM beta chain, humanhuman

Predictions only

Length 263 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMBP28068 AP005136.2-201ENST00000583253 1049 ntBASIC4.54□□□□□ -1.68
HLA-DMBP28068 AC090227.1-201ENST00000590532 936 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
HLA-DMBP28068 AP001823.1-201ENST00000604056 1003 ntBASIC4.54□□□□□ -1.68
HLA-DMBP28068 AL161457.2-204ENST00000609241 869 ntTSL 5 BASIC4.54□□□□□ -1.68
HLA-DMBP28068 MIR6778-201ENST00000617912 73 ntBASIC4.54□□□□□ -1.68
HLA-DMBP28068 SNX18P12-201ENST00000624821 759 ntBASIC4.54□□□□□ -1.68
HLA-DMBP28068 AC092574.2-201ENST00000631198 753 ntTSL 3 BASIC4.54□□□□□ -1.68
HLA-DMBP28068 AL357140.4-201ENST00000636827 412 ntBASIC4.54□□□□□ -1.68
HLA-DMBP28068 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC4.54□□□□□ -1.68
HLA-DMBP28068 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
HLA-DMBP28068 AL022311.1-201ENST00000623726 19416 ntBASIC4.54□□□□□ -1.68
HLA-DMBP28068 AL355834.1-201ENST00000556602 3965 ntBASIC4.54□□□□□ -1.68
HLA-DMBP28068 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC4.54□□□□□ -1.68
HLA-DMBP28068 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
HLA-DMBP28068 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
HLA-DMBP28068 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
HLA-DMBP28068 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC4.54□□□□□ -1.68
HLA-DMBP28068 GNRHR-201ENST00000226413 2164 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
HLA-DMBP28068 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC4.54□□□□□ -1.68
HLA-DMBP28068 OR4N5-202ENST00000641086 2187 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
HLA-DMBP28068 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
HLA-DMBP28068 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC4.54□□□□□ -1.68
HLA-DMBP28068 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC4.54□□□□□ -1.68
HLA-DMBP28068 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC4.54□□□□□ -1.68
HLA-DMBP28068 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC4.54□□□□□ -1.68
HLA-DMBP28068 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
HLA-DMBP28068 PCAT19-201ENST00000588495 3472 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
HLA-DMBP28068 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC4.53□□□□□ -1.68
HLA-DMBP28068 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC4.53□□□□□ -1.68
HLA-DMBP28068 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC4.53□□□□□ -1.68
HLA-DMBP28068 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC4.53□□□□□ -1.68
HLA-DMBP28068 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
HLA-DMBP28068 LRRC39-202ENST00000370137 1396 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
HLA-DMBP28068 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC4.53□□□□□ -1.68
HLA-DMBP28068 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
HLA-DMBP28068 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
HLA-DMBP28068 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
HLA-DMBP28068 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
HLA-DMBP28068 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
HLA-DMBP28068 SMG1-201ENST00000330588 1588 ntTSL 5 BASIC4.53□□□□□ -1.68
HLA-DMBP28068 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
HLA-DMBP28068 PKN2-202ENST00000370513 2890 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
HLA-DMBP28068 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
HLA-DMBP28068 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC4.53□□□□□ -1.68
HLA-DMBP28068 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
HLA-DMBP28068 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
HLA-DMBP28068 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
HLA-DMBP28068 OR4N2-201ENST00000315947 924 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
HLA-DMBP28068 RNU105B-201ENST00000364478 208 ntBASIC4.53□□□□□ -1.68
HLA-DMBP28068 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC4.53□□□□□ -1.68
HLA-DMBP28068 PKIB-203ENST00000368446 556 ntTSL 2 BASIC4.53□□□□□ -1.68
HLA-DMBP28068 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC4.53□□□□□ -1.68
HLA-DMBP28068 OR7E156P-201ENST00000400303 464 ntBASIC4.53□□□□□ -1.68
HLA-DMBP28068 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
HLA-DMBP28068 RN7SKP166-201ENST00000410812 305 ntBASIC4.53□□□□□ -1.68
HLA-DMBP28068 AC011752.1-203ENST00000417609 582 ntTSL 2 BASIC4.53□□□□□ -1.68
HLA-DMBP28068 LINC00701-201ENST00000418295 742 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
HLA-DMBP28068 RPS7P8-201ENST00000418311 581 ntBASIC4.53□□□□□ -1.68
HLA-DMBP28068 AC115283.1-201ENST00000427353 400 ntBASIC4.53□□□□□ -1.68
HLA-DMBP28068 VTI1BP4-201ENST00000427516 527 ntBASIC4.53□□□□□ -1.68
HLA-DMBP28068 AC010240.2-201ENST00000445363 1205 ntBASIC4.53□□□□□ -1.68
HLA-DMBP28068 SYPL1-205ENST00000470347 1193 ntTSL 3 BASIC4.53□□□□□ -1.68
HLA-DMBP28068 RPL12P30-201ENST00000488389 499 ntBASIC4.53□□□□□ -1.68
HLA-DMBP28068 KDELR2-206ENST00000490996 655 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
HLA-DMBP28068 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC4.53□□□□□ -1.68
HLA-DMBP28068 AC090958.1-201ENST00000511122 351 ntBASIC4.53□□□□□ -1.68
HLA-DMBP28068 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC4.53□□□□□ -1.68
HLA-DMBP28068 RNA5SP434-201ENST00000516647 121 ntBASIC4.53□□□□□ -1.68
HLA-DMBP28068 H2AFV-208ENST00000521529 439 ntTSL 5 BASIC4.53□□□□□ -1.68
HLA-DMBP28068 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
HLA-DMBP28068 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
HLA-DMBP28068 AC137800.1-201ENST00000562976 573 ntTSL 4 BASIC4.53□□□□□ -1.68
HLA-DMBP28068 PWRN1-206ENST00000565512 433 ntTSL 2 BASIC4.53□□□□□ -1.68
HLA-DMBP28068 AC134669.1-201ENST00000581275 672 ntBASIC4.53□□□□□ -1.68
HLA-DMBP28068 AC011468.3-201ENST00000597886 332 ntTSL 3 BASIC4.53□□□□□ -1.68
HLA-DMBP28068 AC079315.1-201ENST00000602952 623 ntBASIC4.53□□□□□ -1.68
HLA-DMBP28068 AL589745.2-201ENST00000616366 555 ntTSL 4 BASIC4.53□□□□□ -1.68
HLA-DMBP28068 RNA5SP439-201ENST00000617595 124 ntBASIC4.53□□□□□ -1.68
HLA-DMBP28068 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
HLA-DMBP28068 AC025262.3-201ENST00000623666 360 ntBASIC4.53□□□□□ -1.68
HLA-DMBP28068 SNAP23-222ENST00000626061 237 ntTSL 5 BASIC4.53□□□□□ -1.68
HLA-DMBP28068 SNAP23-223ENST00000627440 210 ntTSL 5 BASIC4.53□□□□□ -1.68
HLA-DMBP28068 AC073488.6-201ENST00000632293 754 ntBASIC4.53□□□□□ -1.68
HLA-DMBP28068 CDH18-210ENST00000511273 2318 ntTSL 5 BASIC4.53□□□□□ -1.68
HLA-DMBP28068 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
HLA-DMBP28068 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
HLA-DMBP28068 AL355488.2-201ENST00000609909 2850 ntBASIC4.53□□□□□ -1.68
HLA-DMBP28068 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
HLA-DMBP28068 IFIT1P1-201ENST00000400497 1449 ntBASIC4.53□□□□□ -1.68
HLA-DMBP28068 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
HLA-DMBP28068 AC016745.2-201ENST00000608834 3443 ntBASIC4.53□□□□□ -1.68
HLA-DMBP28068 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
HLA-DMBP28068 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC4.53□□□□□ -1.68
HLA-DMBP28068 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC4.53□□□□□ -1.68
HLA-DMBP28068 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.69
HLA-DMBP28068 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
HLA-DMBP28068 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC4.52□□□□□ -1.69
HLA-DMBP28068 TNFSF11-202ENST00000358545 1520 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
HLA-DMBP28068 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC4.52□□□□□ -1.69
HLA-DMBP28068 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC4.52□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 79.5 ms