Protein–RNA interactions for Protein: P24928

POLR2A, DNA-directed RNA polymerase II subunit RPB1, humanhuman

Known RBP Predictions only

Length 1,970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2AP24928 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC6.89□□□□□ -1.31
POLR2AP24928 LRRTM4-205ENST00000409911 2976 ntAPPRIS ALT1 TSL 5 BASIC6.89□□□□□ -1.31
POLR2AP24928 CACNB4-239ENST00000636947 5575 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
POLR2AP24928 PLCB1-202ENST00000378637 3864 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
POLR2AP24928 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC6.89□□□□□ -1.31
POLR2AP24928 ARPP21-215ENST00000432682 1015 ntTSL 5 BASIC6.89□□□□□ -1.31
POLR2AP24928 ARPP21-218ENST00000438071 1103 ntTSL 3 BASIC6.89□□□□□ -1.31
POLR2AP24928 PA2G4P6-201ENST00000438325 1197 ntBASIC6.89□□□□□ -1.31
POLR2AP24928 OR7L1P-201ENST00000456181 380 ntBASIC6.89□□□□□ -1.31
POLR2AP24928 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC6.89□□□□□ -1.31
POLR2AP24928 AC124893.1-201ENST00000496247 545 ntTSL 5 BASIC6.89□□□□□ -1.31
POLR2AP24928 AC066613.1-201ENST00000559977 1053 ntTSL 2 BASIC6.89□□□□□ -1.31
POLR2AP24928 MIR4436B2-201ENST00000581415 91 ntBASIC6.89□□□□□ -1.31
POLR2AP24928 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC6.89□□□□□ -1.31
POLR2AP24928 MIR4436B1-201ENST00000583272 91 ntBASIC6.89□□□□□ -1.31
POLR2AP24928 AL133406.3-201ENST00000606817 541 ntBASIC6.89□□□□□ -1.31
POLR2AP24928 OR5H15-202ENST00000641450 1229 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
POLR2AP24928 PROX1-202ENST00000366958 8240 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
POLR2AP24928 TBC1D32-201ENST00000275159 4431 ntAPPRIS ALT2 TSL 5 BASIC6.89□□□□□ -1.31
POLR2AP24928 KIDINS220-206ENST00000473731 7248 ntTSL 5 BASIC6.89□□□□□ -1.31
POLR2AP24928 SLC35A3-207ENST00000533028 14759 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
POLR2AP24928 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
POLR2AP24928 PAK5-201ENST00000353224 4500 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
POLR2AP24928 ITK-201ENST00000422843 4528 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
POLR2AP24928 FOXJ3-205ENST00000372573 5309 ntAPPRIS P3 TSL 2 BASIC6.89□□□□□ -1.31
POLR2AP24928 KCNJ1-205ENST00000392666 2621 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
POLR2AP24928 FRMD3-207ENST00000621208 5064 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
POLR2AP24928 ACSL5-203ENST00000356116 3353 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
POLR2AP24928 FBXW7-203ENST00000296555 3572 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
POLR2AP24928 UGDH-205ENST00000506179 3021 ntAPPRIS P1 TSL 5 BASIC6.88□□□□□ -1.31
POLR2AP24928 EEF1A1P30-201ENST00000429708 1315 ntBASIC6.88□□□□□ -1.31
POLR2AP24928 OXCT1-206ENST00000512084 1593 ntTSL 2 BASIC6.88□□□□□ -1.31
POLR2AP24928 PTK2-201ENST00000340930 4414 ntTSL 2 BASIC6.88□□□□□ -1.31
POLR2AP24928 AL159987.1-201ENST00000347911 293 ntBASIC6.88□□□□□ -1.31
POLR2AP24928 RNU1-77P-201ENST00000390868 162 ntBASIC6.88□□□□□ -1.31
POLR2AP24928 UBE2V1P14-201ENST00000415815 558 ntBASIC6.88□□□□□ -1.31
POLR2AP24928 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC6.88□□□□□ -1.31
POLR2AP24928 AC073850.1-201ENST00000449243 255 ntBASIC6.88□□□□□ -1.31
POLR2AP24928 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC6.88□□□□□ -1.31
POLR2AP24928 GRIK1-AS1-205ENST00000455392 767 ntTSL 3 BASIC6.88□□□□□ -1.31
POLR2AP24928 HIGD1AP14-201ENST00000507617 282 ntBASIC6.88□□□□□ -1.31
POLR2AP24928 AC139365.2-201ENST00000517972 253 ntBASIC6.88□□□□□ -1.31
POLR2AP24928 OR11J2P-201ENST00000555298 907 ntBASIC6.88□□□□□ -1.31
POLR2AP24928 FKBP1AP1-201ENST00000594588 318 ntBASIC6.88□□□□□ -1.31
POLR2AP24928 HCG18-243ENST00000602498 327 ntTSL 3 BASIC6.88□□□□□ -1.31
POLR2AP24928 AC126915.2-201ENST00000610957 190 ntBASIC6.88□□□□□ -1.31
POLR2AP24928 LINC02342-201ENST00000627910 461 ntTSL 5 BASIC6.88□□□□□ -1.31
POLR2AP24928 SAMMSON-227ENST00000642114 1199 ntBASIC6.88□□□□□ -1.31
POLR2AP24928 NCR3LG1-201ENST00000338965 6438 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
POLR2AP24928 AC087516.1-201ENST00000561236 2428 ntBASIC6.88□□□□□ -1.31
POLR2AP24928 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC6.88□□□□□ -1.31
POLR2AP24928 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
POLR2AP24928 RGS4-203ENST00000367909 3200 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
POLR2AP24928 ZBTB8B-201ENST00000609129 12834 ntAPPRIS P1 TSL 5 BASIC6.88□□□□□ -1.31
POLR2AP24928 FOXP1-212ENST00000491238 2250 ntTSL 2 BASIC6.88□□□□□ -1.31
POLR2AP24928 INTS6-202ENST00000398119 7041 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
POLR2AP24928 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC6.88□□□□□ -1.31
POLR2AP24928 PRNCR1-201ENST00000635449 12727 ntBASIC6.88□□□□□ -1.31
POLR2AP24928 ART4-201ENST00000228936 5129 ntAPPRIS P2 TSL 1 (best) BASIC6.88□□□□□ -1.31
POLR2AP24928 A2ML1-201ENST00000299698 5274 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
POLR2AP24928 RPL23P2-201ENST00000320371 421 ntBASIC6.88□□□□□ -1.31
POLR2AP24928 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
POLR2AP24928 GAPDHP24-201ENST00000328713 983 ntBASIC6.88□□□□□ -1.31
POLR2AP24928 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC6.88□□□□□ -1.31
POLR2AP24928 GCNT6-201ENST00000379591 934 ntBASIC6.88□□□□□ -1.31
POLR2AP24928 SNORA16A-201ENST00000384342 137 ntBASIC6.88□□□□□ -1.31
POLR2AP24928 MTATP6P17-201ENST00000431030 672 ntBASIC6.88□□□□□ -1.31
POLR2AP24928 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC6.88□□□□□ -1.31
POLR2AP24928 AC008628.1-201ENST00000508663 265 ntBASIC6.88□□□□□ -1.31
POLR2AP24928 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
POLR2AP24928 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC6.88□□□□□ -1.31
POLR2AP24928 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC6.88□□□□□ -1.31
POLR2AP24928 AL049539.1-201ENST00000611964 459 ntBASIC6.88□□□□□ -1.31
POLR2AP24928 CASC19-264ENST00000641912 1184 ntBASIC6.88□□□□□ -1.31
POLR2AP24928 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC6.87□□□□□ -1.31
POLR2AP24928 MYPN-201ENST00000354393 4596 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
POLR2AP24928 ZNF329-203ENST00000597186 3930 ntAPPRIS P1 TSL 5 BASIC6.87□□□□□ -1.31
POLR2AP24928 NBPF26-204ENST00000615145 2656 ntTSL 5 BASIC6.87□□□□□ -1.31
POLR2AP24928 NBPF14-209ENST00000620240 2656 ntTSL 5 BASIC6.87□□□□□ -1.31
POLR2AP24928 SLC8A1-204ENST00000405269 2965 ntTSL 5 BASIC6.87□□□□□ -1.31
POLR2AP24928 AC092692.1-201ENST00000623625 2595 ntBASIC6.87□□□□□ -1.31
POLR2AP24928 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
POLR2AP24928 ERVFRD-1-201ENST00000472091 3198 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
POLR2AP24928 AC008957.3-201ENST00000624112 2242 ntBASIC6.87□□□□□ -1.31
POLR2AP24928 CNTN5-202ENST00000418526 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC6.87□□□□□ -1.31
POLR2AP24928 OR5T3-201ENST00000303059 1023 ntBASIC6.87□□□□□ -1.31
POLR2AP24928 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
POLR2AP24928 AL139128.1-201ENST00000413921 941 ntBASIC6.87□□□□□ -1.31
POLR2AP24928 AC023141.8-201ENST00000442554 208 ntBASIC6.87□□□□□ -1.31
POLR2AP24928 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC6.87□□□□□ -1.31
POLR2AP24928 NDUFA5P8-201ENST00000449019 346 ntBASIC6.87□□□□□ -1.31
POLR2AP24928 AL137001.1-201ENST00000450212 199 ntTSL 3 BASIC6.87□□□□□ -1.31
POLR2AP24928 AL353718.1-201ENST00000451028 517 ntBASIC6.87□□□□□ -1.31
POLR2AP24928 LDHBP2-201ENST00000456969 1005 ntBASIC6.87□□□□□ -1.31
POLR2AP24928 AC092590.1-201ENST00000471672 737 ntTSL 3 BASIC6.87□□□□□ -1.31
POLR2AP24928 IGLV2-34-201ENST00000490007 283 ntBASIC6.87□□□□□ -1.31
POLR2AP24928 AL136520.1-202ENST00000555494 763 ntBASIC6.87□□□□□ -1.31
POLR2AP24928 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC6.87□□□□□ -1.31
POLR2AP24928 MIR3691-201ENST00000578066 90 ntBASIC6.87□□□□□ -1.31
POLR2AP24928 MIR4646-201ENST00000580775 63 ntBASIC6.87□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 72.6 ms