Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 RASSF8-216ENST00000615708 1328 ntTSL 5 BASIC6.08□□□□□ -1.44
HLA-DPA1P20036 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC6.08□□□□□ -1.44
HLA-DPA1P20036 TSLP-201ENST00000344895 736 ntAPPRIS P2 TSL 1 (best) BASIC6.08□□□□□ -1.44
HLA-DPA1P20036 RNU6-1331P-201ENST00000363658 106 ntBASIC6.08□□□□□ -1.44
HLA-DPA1P20036 IFNB1-201ENST00000380232 859 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
HLA-DPA1P20036 TRAV1-2-201ENST00000390423 402 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
HLA-DPA1P20036 CXADRP1-201ENST00000398098 1095 ntBASIC6.08□□□□□ -1.44
HLA-DPA1P20036 GCNT1P4-201ENST00000404096 329 ntBASIC6.08□□□□□ -1.44
HLA-DPA1P20036 LINC00396-201ENST00000411690 439 ntTSL 3 BASIC6.08□□□□□ -1.44
HLA-DPA1P20036 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC6.08□□□□□ -1.44
HLA-DPA1P20036 AL365220.1-201ENST00000432923 399 ntBASIC6.08□□□□□ -1.44
HLA-DPA1P20036 TH2LCRR-202ENST00000435042 472 ntTSL 5 BASIC6.08□□□□□ -1.44
HLA-DPA1P20036 AC023141.3-201ENST00000436698 278 ntBASIC6.08□□□□□ -1.44
HLA-DPA1P20036 BCAP29-207ENST00000445771 1157 ntTSL 5 BASIC6.08□□□□□ -1.44
HLA-DPA1P20036 HRAT17-202ENST00000451962 687 ntTSL 5 BASIC6.08□□□□□ -1.44
HLA-DPA1P20036 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC6.08□□□□□ -1.44
HLA-DPA1P20036 MOCS2-205ENST00000508922 1210 ntTSL 5 BASIC6.08□□□□□ -1.44
HLA-DPA1P20036 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC6.08□□□□□ -1.44
HLA-DPA1P20036 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC6.08□□□□□ -1.44
HLA-DPA1P20036 AP001893.1-201ENST00000532866 362 ntTSL 5 BASIC6.08□□□□□ -1.44
HLA-DPA1P20036 CCND2-AS2-201ENST00000537370 495 ntTSL 4 BASIC6.08□□□□□ -1.44
HLA-DPA1P20036 VEPH1-219ENST00000537559 992 ntTSL 5 BASIC6.08□□□□□ -1.44
HLA-DPA1P20036 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC6.08□□□□□ -1.44
HLA-DPA1P20036 ZNF235-204ENST00000589799 955 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
HLA-DPA1P20036 AC010615.3-201ENST00000597319 394 ntBASIC6.08□□□□□ -1.44
HLA-DPA1P20036 AC011468.3-201ENST00000597886 332 ntTSL 3 BASIC6.08□□□□□ -1.44
HLA-DPA1P20036 AC073333.2-201ENST00000603589 769 ntBASIC6.08□□□□□ -1.44
HLA-DPA1P20036 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC6.08□□□□□ -1.44
HLA-DPA1P20036 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC6.08□□□□□ -1.44
HLA-DPA1P20036 AP005212.4-201ENST00000614206 710 ntBASIC6.08□□□□□ -1.44
HLA-DPA1P20036 CXADRP3-202ENST00000617265 1100 ntBASIC6.08□□□□□ -1.44
HLA-DPA1P20036 AC069234.4-201ENST00000621276 412 ntBASIC6.08□□□□□ -1.44
HLA-DPA1P20036 AL357562.1-201ENST00000624911 609 ntBASIC6.08□□□□□ -1.44
HLA-DPA1P20036 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC6.08□□□□□ -1.44
HLA-DPA1P20036 THAP12P8-201ENST00000447914 2115 ntBASIC6.08□□□□□ -1.44
HLA-DPA1P20036 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC6.08□□□□□ -1.44
HLA-DPA1P20036 ACOD1-202ENST00000449753 2097 ntAPPRIS ALT2 TSL 3 BASIC6.08□□□□□ -1.44
HLA-DPA1P20036 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
HLA-DPA1P20036 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
HLA-DPA1P20036 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC6.08□□□□□ -1.44
HLA-DPA1P20036 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC6.08□□□□□ -1.44
HLA-DPA1P20036 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
HLA-DPA1P20036 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC6.07□□□□□ -1.44
HLA-DPA1P20036 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
HLA-DPA1P20036 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC6.07□□□□□ -1.44
HLA-DPA1P20036 KIF27-202ENST00000334204 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
HLA-DPA1P20036 AASDH-203ENST00000502617 3004 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
HLA-DPA1P20036 AL354696.2-201ENST00000619407 1910 ntTSL 2 BASIC6.07□□□□□ -1.44
HLA-DPA1P20036 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
HLA-DPA1P20036 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
HLA-DPA1P20036 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC6.07□□□□□ -1.44
HLA-DPA1P20036 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
HLA-DPA1P20036 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC6.07□□□□□ -1.44
HLA-DPA1P20036 UQCR10-201ENST00000330029 916 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
HLA-DPA1P20036 KRTAP3-1-201ENST00000391588 594 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
HLA-DPA1P20036 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC6.07□□□□□ -1.44
HLA-DPA1P20036 RPA3-204ENST00000406109 434 ntTSL 3 BASIC6.07□□□□□ -1.44
HLA-DPA1P20036 RNA5SP431-201ENST00000410312 120 ntBASIC6.07□□□□□ -1.44
HLA-DPA1P20036 GAS5-202ENST00000414075 413 ntTSL 2 BASIC6.07□□□□□ -1.44
HLA-DPA1P20036 AC087380.1-202ENST00000415970 1163 ntTSL 2 BASIC6.07□□□□□ -1.44
HLA-DPA1P20036 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC6.07□□□□□ -1.44
HLA-DPA1P20036 NMD3P2-201ENST00000421815 761 ntBASIC6.07□□□□□ -1.44
HLA-DPA1P20036 AL136988.2-201ENST00000440729 861 ntTSL 3 BASIC6.07□□□□□ -1.44
HLA-DPA1P20036 CUBNP2-201ENST00000443534 1139 ntBASIC6.07□□□□□ -1.44
HLA-DPA1P20036 AL359839.1-201ENST00000451975 1160 ntBASIC6.07□□□□□ -1.44
HLA-DPA1P20036 AC239798.3-201ENST00000454459 408 ntBASIC6.07□□□□□ -1.44
HLA-DPA1P20036 AC092865.4-201ENST00000477936 615 ntBASIC6.07□□□□□ -1.44
HLA-DPA1P20036 AC021146.10-201ENST00000515628 706 ntBASIC6.07□□□□□ -1.44
HLA-DPA1P20036 RN7SKP70-201ENST00000516655 271 ntBASIC6.07□□□□□ -1.44
HLA-DPA1P20036 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
HLA-DPA1P20036 AC244502.2-201ENST00000543361 851 ntBASIC6.07□□□□□ -1.44
HLA-DPA1P20036 LINC00556-201ENST00000569603 412 ntBASIC6.07□□□□□ -1.44
HLA-DPA1P20036 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC6.07□□□□□ -1.44
HLA-DPA1P20036 AC124916.2-201ENST00000604416 224 ntBASIC6.07□□□□□ -1.44
HLA-DPA1P20036 LINC02536-201ENST00000625799 625 ntTSL 3 BASIC6.07□□□□□ -1.44
HLA-DPA1P20036 AC073488.3-201ENST00000631611 778 ntBASIC6.07□□□□□ -1.44
HLA-DPA1P20036 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
HLA-DPA1P20036 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
HLA-DPA1P20036 FBXO3-213ENST00000534136 3217 ntTSL 5 BASIC6.07□□□□□ -1.44
HLA-DPA1P20036 AC112255.1-201ENST00000624070 2493 ntBASIC6.07□□□□□ -1.44
HLA-DPA1P20036 BPIFC-201ENST00000300399 1980 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
HLA-DPA1P20036 GNL2P1-201ENST00000451274 2190 ntBASIC6.07□□□□□ -1.44
HLA-DPA1P20036 ATP5A1P4-201ENST00000556888 1605 ntBASIC6.07□□□□□ -1.44
HLA-DPA1P20036 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC6.06□□□□□ -1.44
HLA-DPA1P20036 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
HLA-DPA1P20036 AC027279.1-201ENST00000568885 4284 ntBASIC6.06□□□□□ -1.44
HLA-DPA1P20036 AC099506.1-201ENST00000567359 4037 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
HLA-DPA1P20036 HOMEZ-203ENST00000561013 3337 ntAPPRIS ALT2 TSL 2 BASIC6.06□□□□□ -1.44
HLA-DPA1P20036 TAF12-202ENST00000373824 1334 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
HLA-DPA1P20036 LINC00102-201ENST00000445785 1340 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
HLA-DPA1P20036 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
HLA-DPA1P20036 TGFBR1-208ENST00000550253 1538 ntTSL 2 BASIC6.06□□□□□ -1.44
HLA-DPA1P20036 RAB5CP1-201ENST00000395972 580 ntBASIC6.06□□□□□ -1.44
HLA-DPA1P20036 TMBIM4-203ENST00000398033 844 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
HLA-DPA1P20036 AC096644.3-201ENST00000416788 338 ntBASIC6.06□□□□□ -1.44
HLA-DPA1P20036 AL354956.1-201ENST00000424487 467 ntTSL 5 BASIC6.06□□□□□ -1.44
HLA-DPA1P20036 AC244035.2-201ENST00000425896 630 ntTSL 3 BASIC6.06□□□□□ -1.44
HLA-DPA1P20036 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC6.06□□□□□ -1.44
HLA-DPA1P20036 RAB9AP5-201ENST00000437794 597 ntBASIC6.06□□□□□ -1.44
HLA-DPA1P20036 AL353662.1-201ENST00000439099 327 ntBASIC6.06□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 82.1 ms