Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC6.51□□□□□ -1.37
COL11A1P12107 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC6.51□□□□□ -1.37
COL11A1P12107 RPL32P9-201ENST00000487963 407 ntBASIC6.51□□□□□ -1.37
COL11A1P12107 TRBV5-2-201ENST00000489095 273 ntBASIC6.51□□□□□ -1.37
COL11A1P12107 CSNK1A1P3-201ENST00000504105 330 ntBASIC6.51□□□□□ -1.37
COL11A1P12107 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC6.51□□□□□ -1.37
COL11A1P12107 OR8G3P-201ENST00000533406 921 ntBASIC6.51□□□□□ -1.37
COL11A1P12107 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC6.51□□□□□ -1.37
COL11A1P12107 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
COL11A1P12107 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC6.51□□□□□ -1.37
COL11A1P12107 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC6.51□□□□□ -1.37
COL11A1P12107 MIR6730-201ENST00000622213 67 ntBASIC6.51□□□□□ -1.37
COL11A1P12107 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
COL11A1P12107 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC6.51□□□□□ -1.37
COL11A1P12107 RTL9-201ENST00000465301 5426 ntAPPRIS P2 TSL 1 (best) BASIC6.51□□□□□ -1.37
COL11A1P12107 PDE4DIP-206ENST00000369356 8307 ntAPPRIS P4 TSL 1 (best) BASIC6.51□□□□□ -1.37
COL11A1P12107 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC6.51□□□□□ -1.37
COL11A1P12107 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC6.51□□□□□ -1.37
COL11A1P12107 USP29-201ENST00000254181 3705 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
COL11A1P12107 LINC01197-205ENST00000614853 1774 ntTSL 3 BASIC6.51□□□□□ -1.37
COL11A1P12107 LINC00700-201ENST00000413603 2097 ntTSL 2 BASIC6.51□□□□□ -1.37
COL11A1P12107 NBPF12-205ENST00000617614 4630 ntTSL 5 BASIC6.51□□□□□ -1.37
COL11A1P12107 JADE3-203ENST00000611250 4713 ntAPPRIS P1 TSL 2 BASIC6.51□□□□□ -1.37
COL11A1P12107 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
COL11A1P12107 SLC17A8-201ENST00000323346 3983 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
COL11A1P12107 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC6.51□□□□□ -1.37
COL11A1P12107 PRLR-208ENST00000509140 1610 ntTSL 5 BASIC6.51□□□□□ -1.37
COL11A1P12107 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC6.51□□□□□ -1.37
COL11A1P12107 AL359195.2-201ENST00000623657 4412 ntBASIC6.51□□□□□ -1.37
COL11A1P12107 PAK5-201ENST00000353224 4500 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
COL11A1P12107 AC022893.2-201ENST00000564832 3296 ntBASIC6.51□□□□□ -1.37
COL11A1P12107 OR2T7-201ENST00000641057 3463 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
COL11A1P12107 ST8SIA5-203ENST00000538168 13761 ntTSL 2 BASIC6.51□□□□□ -1.37
COL11A1P12107 CSDE1-203ENST00000358528 4076 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
COL11A1P12107 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
COL11A1P12107 AC005725.1-201ENST00000577346 2607 ntBASIC6.51□□□□□ -1.37
COL11A1P12107 LMO7-202ENST00000341547 7237 ntAPPRIS P3 TSL 1 (best) BASIC6.5□□□□□ -1.37
COL11A1P12107 RNA5SP514-201ENST00000363717 111 ntBASIC6.5□□□□□ -1.37
COL11A1P12107 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC6.5□□□□□ -1.37
COL11A1P12107 RNU1-77P-201ENST00000390868 162 ntBASIC6.5□□□□□ -1.37
COL11A1P12107 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC6.5□□□□□ -1.37
COL11A1P12107 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC6.5□□□□□ -1.37
COL11A1P12107 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC6.5□□□□□ -1.37
COL11A1P12107 SPRYD7P1-201ENST00000443861 570 ntBASIC6.5□□□□□ -1.37
COL11A1P12107 AC099521.1-201ENST00000482557 334 ntBASIC6.5□□□□□ -1.37
COL11A1P12107 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC6.5□□□□□ -1.37
COL11A1P12107 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC6.5□□□□□ -1.37
COL11A1P12107 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC6.5□□□□□ -1.37
COL11A1P12107 AP002505.2-201ENST00000623585 696 ntBASIC6.5□□□□□ -1.37
COL11A1P12107 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
COL11A1P12107 C4BPAP1-201ENST00000415474 1893 ntBASIC6.5□□□□□ -1.37
COL11A1P12107 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
COL11A1P12107 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC6.5□□□□□ -1.37
COL11A1P12107 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC6.5□□□□□ -1.37
COL11A1P12107 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC6.5□□□□□ -1.37
COL11A1P12107 HYDIN2-203ENST00000614586 13885 ntBASIC6.5□□□□□ -1.37
COL11A1P12107 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
COL11A1P12107 CDY2A-201ENST00000250838 1954 ntAPPRIS ALT1 BASIC6.5□□□□□ -1.37
COL11A1P12107 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC6.5□□□□□ -1.37
COL11A1P12107 CNTNAP2-203ENST00000463592 6076 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
COL11A1P12107 SLC17A2-203ENST00000377850 2524 ntAPPRIS ALT2 TSL 5 BASIC6.5□□□□□ -1.37
COL11A1P12107 EMX2OS-206ENST00000551288 7280 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
COL11A1P12107 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC6.5□□□□□ -1.37
COL11A1P12107 ERLIN2-211ENST00000523887 2347 ntTSL 2 BASIC6.5□□□□□ -1.37
COL11A1P12107 AC009831.5-201ENST00000624000 3189 ntBASIC6.5□□□□□ -1.37
COL11A1P12107 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
COL11A1P12107 WFDC11-201ENST00000324384 614 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
COL11A1P12107 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
COL11A1P12107 SNORA70H-201ENST00000383910 135 ntBASIC6.5□□□□□ -1.37
COL11A1P12107 SNORA70J-201ENST00000384182 135 ntBASIC6.5□□□□□ -1.37
COL11A1P12107 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
COL11A1P12107 GAPDHP42-201ENST00000406848 981 ntBASIC6.5□□□□□ -1.37
COL11A1P12107 RNU6ATAC18P-201ENST00000408413 101 ntBASIC6.5□□□□□ -1.37
COL11A1P12107 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC6.5□□□□□ -1.37
COL11A1P12107 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC6.5□□□□□ -1.37
COL11A1P12107 CNOT7P2-201ENST00000441051 832 ntBASIC6.5□□□□□ -1.37
COL11A1P12107 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC6.5□□□□□ -1.37
COL11A1P12107 AC005297.1-201ENST00000444765 862 ntBASIC6.5□□□□□ -1.37
COL11A1P12107 AL606490.1-201ENST00000452266 765 ntBASIC6.5□□□□□ -1.37
COL11A1P12107 AL035090.1-201ENST00000454835 332 ntBASIC6.5□□□□□ -1.37
COL11A1P12107 RPL17P2-201ENST00000491913 451 ntBASIC6.5□□□□□ -1.37
COL11A1P12107 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC6.5□□□□□ -1.37
COL11A1P12107 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC6.5□□□□□ -1.37
COL11A1P12107 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC6.5□□□□□ -1.37
COL11A1P12107 LINC01966-201ENST00000595809 821 ntTSL 5 BASIC6.5□□□□□ -1.37
COL11A1P12107 SUGT1P3-202ENST00000604259 383 ntBASIC6.5□□□□□ -1.37
COL11A1P12107 AC004836.1-201ENST00000623032 634 ntBASIC6.5□□□□□ -1.37
COL11A1P12107 ARHGEF12-201ENST00000356641 6891 ntTSL 5 BASIC6.5□□□□□ -1.37
COL11A1P12107 CEP44-206ENST00000503780 4534 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
COL11A1P12107 MIPOL1-201ENST00000327441 7185 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
COL11A1P12107 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
COL11A1P12107 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
COL11A1P12107 AC137056.2-201ENST00000624055 1958 ntBASIC6.49□□□□□ -1.37
COL11A1P12107 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC6.49□□□□□ -1.37
COL11A1P12107 AP3M1-201ENST00000355264 5124 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
COL11A1P12107 CC2D2A-204ENST00000503292 5175 ntAPPRIS P3 TSL 1 (best) BASIC6.49□□□□□ -1.37
COL11A1P12107 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC6.49□□□□□ -1.37
COL11A1P12107 ABLIM1-214ENST00000533213 7606 ntTSL 5 BASIC6.49□□□□□ -1.37
COL11A1P12107 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
COL11A1P12107 FAM13C-219ENST00000621119 3400 ntAPPRIS ALT2 TSL 5 BASIC6.49□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 99 ms