Protein–RNA interactions for Protein: P0C6S8

LINGO3, Leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 3, humanhuman

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINGO3P0C6S8 AL157884.1-201ENST00000424561 454 ntBASIC5.86□□□□□ -1.47
LINGO3P0C6S8 AC016582.1-203ENST00000433142 502 ntTSL 3 BASIC5.86□□□□□ -1.47
LINGO3P0C6S8 AL592146.1-201ENST00000433869 1126 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
LINGO3P0C6S8 AL354989.1-201ENST00000448245 635 ntTSL 3 BASIC5.86□□□□□ -1.47
LINGO3P0C6S8 USP17L23-201ENST00000506619 551 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
LINGO3P0C6S8 AC010387.1-201ENST00000507526 487 ntTSL 2 BASIC5.86□□□□□ -1.47
LINGO3P0C6S8 TPT1-AS1-207ENST00000520310 563 ntTSL 5 BASIC5.86□□□□□ -1.47
LINGO3P0C6S8 AC084024.3-201ENST00000520598 562 ntTSL 4 BASIC5.86□□□□□ -1.47
LINGO3P0C6S8 OR4A42P-201ENST00000531397 938 ntBASIC5.86□□□□□ -1.47
LINGO3P0C6S8 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC5.86□□□□□ -1.47
LINGO3P0C6S8 AC068993.1-201ENST00000546724 589 ntBASIC5.86□□□□□ -1.47
LINGO3P0C6S8 TMEM106C-215ENST00000550552 776 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
LINGO3P0C6S8 SRP14-AS1-203ENST00000560341 669 ntTSL 2 BASIC5.86□□□□□ -1.47
LINGO3P0C6S8 CNEP1R1-204ENST00000562576 656 ntTSL 5 BASIC5.86□□□□□ -1.47
LINGO3P0C6S8 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC5.86□□□□□ -1.47
LINGO3P0C6S8 AC004232.2-201ENST00000574245 821 ntBASIC5.86□□□□□ -1.47
LINGO3P0C6S8 LINC01966-201ENST00000595809 821 ntTSL 5 BASIC5.86□□□□□ -1.47
LINGO3P0C6S8 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC5.86□□□□□ -1.47
LINGO3P0C6S8 AC005479.3-201ENST00000602790 431 ntBASIC5.86□□□□□ -1.47
LINGO3P0C6S8 AL133406.3-201ENST00000606817 541 ntBASIC5.86□□□□□ -1.47
LINGO3P0C6S8 LINC00635-219ENST00000608506 482 ntTSL 5 BASIC5.86□□□□□ -1.47
LINGO3P0C6S8 HTR1DP1-201ENST00000616500 888 ntBASIC5.86□□□□□ -1.47
LINGO3P0C6S8 AC096708.4-201ENST00000620563 552 ntBASIC5.86□□□□□ -1.47
LINGO3P0C6S8 AC022021.1-201ENST00000634334 843 ntTSL 5 BASIC5.86□□□□□ -1.47
LINGO3P0C6S8 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC5.86□□□□□ -1.47
LINGO3P0C6S8 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
LINGO3P0C6S8 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
LINGO3P0C6S8 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
LINGO3P0C6S8 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC5.86□□□□□ -1.47
LINGO3P0C6S8 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
LINGO3P0C6S8 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC5.86□□□□□ -1.47
LINGO3P0C6S8 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
LINGO3P0C6S8 AL034546.1-201ENST00000623740 3693 ntBASIC5.86□□□□□ -1.47
LINGO3P0C6S8 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
LINGO3P0C6S8 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC5.86□□□□□ -1.47
LINGO3P0C6S8 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
LINGO3P0C6S8 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC5.85□□□□□ -1.47
LINGO3P0C6S8 COPS4-209ENST00000511653 1695 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
LINGO3P0C6S8 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
LINGO3P0C6S8 SLC35F5-213ENST00000638402 1554 ntTSL 5 BASIC5.85□□□□□ -1.47
LINGO3P0C6S8 AL353743.3-201ENST00000442109 1468 ntBASIC5.85□□□□□ -1.47
LINGO3P0C6S8 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC5.85□□□□□ -1.47
LINGO3P0C6S8 NPY5R-202ENST00000506953 1418 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
LINGO3P0C6S8 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
LINGO3P0C6S8 ESF1-201ENST00000202816 3216 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
LINGO3P0C6S8 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
LINGO3P0C6S8 SNORD16-201ENST00000362803 99 ntBASIC5.85□□□□□ -1.47
LINGO3P0C6S8 SNORD35A-201ENST00000363389 86 ntBASIC5.85□□□□□ -1.47
LINGO3P0C6S8 AL034417.1-201ENST00000399343 800 ntBASIC5.85□□□□□ -1.47
LINGO3P0C6S8 AL133260.1-201ENST00000405720 405 ntBASIC5.85□□□□□ -1.47
LINGO3P0C6S8 RNA5SP431-201ENST00000410312 120 ntBASIC5.85□□□□□ -1.47
LINGO3P0C6S8 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC5.85□□□□□ -1.47
LINGO3P0C6S8 AC078883.1-203ENST00000416080 654 ntTSL 3 BASIC5.85□□□□□ -1.47
LINGO3P0C6S8 Z82198.3-201ENST00000421145 199 ntBASIC5.85□□□□□ -1.47
LINGO3P0C6S8 GPN3P1-201ENST00000423883 535 ntBASIC5.85□□□□□ -1.47
LINGO3P0C6S8 AL354707.3-201ENST00000427308 331 ntBASIC5.85□□□□□ -1.47
LINGO3P0C6S8 PRH1-201ENST00000428168 603 ntAPPRIS ALT2 TSL 5 BASIC5.85□□□□□ -1.47
LINGO3P0C6S8 RPL32-206ENST00000435983 620 ntAPPRIS P1 TSL 2 BASIC5.85□□□□□ -1.47
LINGO3P0C6S8 AL035701.1-202ENST00000437249 371 ntTSL 3 BASIC5.85□□□□□ -1.47
LINGO3P0C6S8 RPL12P49-201ENST00000441100 121 ntBASIC5.85□□□□□ -1.47
LINGO3P0C6S8 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC5.85□□□□□ -1.47
LINGO3P0C6S8 AC092601.1-201ENST00000444526 383 ntBASIC5.85□□□□□ -1.47
LINGO3P0C6S8 RPS18P1-201ENST00000447840 458 ntBASIC5.85□□□□□ -1.47
LINGO3P0C6S8 CT45A5-201ENST00000487941 1161 ntAPPRIS P1 TSL 2 BASIC5.85□□□□□ -1.47
LINGO3P0C6S8 LINC02025-201ENST00000488348 360 ntTSL 3 BASIC5.85□□□□□ -1.47
LINGO3P0C6S8 RN7SL612P-201ENST00000497704 295 ntBASIC5.85□□□□□ -1.47
LINGO3P0C6S8 NR1I3-229ENST00000511748 480 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
LINGO3P0C6S8 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC5.85□□□□□ -1.47
LINGO3P0C6S8 AC138517.1-201ENST00000515724 568 ntBASIC5.85□□□□□ -1.47
LINGO3P0C6S8 AC090791.1-201ENST00000530960 492 ntTSL 3 BASIC5.85□□□□□ -1.47
LINGO3P0C6S8 AC244502.2-201ENST00000543361 851 ntBASIC5.85□□□□□ -1.47
LINGO3P0C6S8 LINC00944-204ENST00000544499 366 ntTSL 5 BASIC5.85□□□□□ -1.47
LINGO3P0C6S8 RPGRIP1L-208ENST00000566096 893 ntTSL 2 BASIC5.85□□□□□ -1.47
LINGO3P0C6S8 AC092067.1-201ENST00000592929 488 ntTSL 3 BASIC5.85□□□□□ -1.47
LINGO3P0C6S8 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC5.85□□□□□ -1.47
LINGO3P0C6S8 AL353729.2-201ENST00000605859 1249 ntBASIC5.85□□□□□ -1.47
LINGO3P0C6S8 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC5.85□□□□□ -1.47
LINGO3P0C6S8 AC100814.1-201ENST00000606963 623 ntBASIC5.85□□□□□ -1.47
LINGO3P0C6S8 OR7M1P-201ENST00000608946 533 ntBASIC5.85□□□□□ -1.47
LINGO3P0C6S8 AF067845.4-201ENST00000633198 480 ntTSL 3 BASIC5.85□□□□□ -1.47
LINGO3P0C6S8 AC116667.2-201ENST00000641075 823 ntBASIC5.85□□□□□ -1.47
LINGO3P0C6S8 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
LINGO3P0C6S8 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC5.85□□□□□ -1.47
LINGO3P0C6S8 AC096921.2-201ENST00000561507 1916 ntBASIC5.85□□□□□ -1.47
LINGO3P0C6S8 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
LINGO3P0C6S8 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC5.85□□□□□ -1.47
LINGO3P0C6S8 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
LINGO3P0C6S8 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
LINGO3P0C6S8 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
LINGO3P0C6S8 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC5.84□□□□□ -1.47
LINGO3P0C6S8 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
LINGO3P0C6S8 LDAH-212ENST00000619656 3663 ntTSL 2 BASIC5.84□□□□□ -1.47
LINGO3P0C6S8 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
LINGO3P0C6S8 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
LINGO3P0C6S8 FASTKD1-204ENST00000453153 2967 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
LINGO3P0C6S8 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC5.84□□□□□ -1.47
LINGO3P0C6S8 ICE2P1-201ENST00000512800 1849 ntBASIC5.84□□□□□ -1.47
LINGO3P0C6S8 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC5.84□□□□□ -1.47
LINGO3P0C6S8 RNU6-386P-201ENST00000362650 107 ntBASIC5.84□□□□□ -1.47
LINGO3P0C6S8 LSM5-203ENST00000409782 649 ntTSL 5 BASIC5.84□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 89.2 ms