Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 ATP2C1-203ENST00000422190 3386 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
APOBP04114 BANK1-206ENST00000504592 3544 ntTSL 2 BASIC3.46□□□□□ -1.86
APOBP04114 MGAT5-202ENST00000409645 8252 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
APOBP04114 PTPN4-201ENST00000263708 10300 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
APOBP04114 KIAA0319-206ENST00000616673 5315 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
APOBP04114 GATAD2B-204ENST00000634544 2342 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
APOBP04114 KIF27-201ENST00000297814 4653 ntAPPRIS P3 TSL 1 (best) BASIC3.46□□□□□ -1.86
APOBP04114 HNMT-203ENST00000329366 835 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
APOBP04114 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC3.46□□□□□ -1.86
APOBP04114 RPS23P2-201ENST00000463671 415 ntBASIC3.46□□□□□ -1.86
APOBP04114 AC073288.1-201ENST00000466291 469 ntTSL 3 BASIC3.46□□□□□ -1.86
APOBP04114 LINC02218-202ENST00000504998 582 ntTSL 4 BASIC3.46□□□□□ -1.86
APOBP04114 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC3.46□□□□□ -1.86
APOBP04114 CYCSP29-201ENST00000533731 318 ntBASIC3.46□□□□□ -1.86
APOBP04114 MIR4311-201ENST00000580794 100 ntBASIC3.46□□□□□ -1.86
APOBP04114 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
APOBP04114 AL445647.2-201ENST00000615170 130 ntBASIC3.46□□□□□ -1.86
APOBP04114 AC009948.3-201ENST00000603415 1798 ntBASIC3.46□□□□□ -1.86
APOBP04114 OTOG-203ENST00000399397 9948 ntAPPRIS P3 TSL 5 BASIC3.46□□□□□ -1.86
APOBP04114 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
APOBP04114 CELF2-204ENST00000417956 8044 ntAPPRIS P3 TSL 1 (best) BASIC3.46□□□□□ -1.86
APOBP04114 AC005034.3-201ENST00000604845 1747 ntBASIC3.46□□□□□ -1.86
APOBP04114 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC3.46□□□□□ -1.86
APOBP04114 ZEB2-234ENST00000636413 8984 ntTSL 5 BASIC3.46□□□□□ -1.86
APOBP04114 FGF13-201ENST00000305414 1939 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
APOBP04114 PRICKLE2-AS1-201ENST00000482609 6505 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
APOBP04114 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC3.46□□□□□ -1.86
APOBP04114 VPS39-202ENST00000348544 2661 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
APOBP04114 DCP2-208ENST00000515408 8029 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
APOBP04114 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
APOBP04114 NEK11-201ENST00000356918 1874 ntAPPRIS ALT2 TSL 5 BASIC3.46□□□□□ -1.86
APOBP04114 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC3.46□□□□□ -1.86
APOBP04114 AC004690.1-201ENST00000418216 328 ntBASIC3.46□□□□□ -1.86
APOBP04114 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
APOBP04114 ZNF733P-202ENST00000444809 1573 ntBASIC3.46□□□□□ -1.86
APOBP04114 AC073072.2-201ENST00000447425 348 ntBASIC3.46□□□□□ -1.86
APOBP04114 AL513533.1-201ENST00000453728 415 ntBASIC3.46□□□□□ -1.86
APOBP04114 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC3.46□□□□□ -1.86
APOBP04114 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC3.46□□□□□ -1.86
APOBP04114 ZNF227-204ENST00000586228 569 ntTSL 2 BASIC3.46□□□□□ -1.86
APOBP04114 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC3.46□□□□□ -1.86
APOBP04114 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC3.46□□□□□ -1.86
APOBP04114 AC091905.4-201ENST00000623432 202 ntBASIC3.46□□□□□ -1.86
APOBP04114 GRB10-207ENST00000402578 4760 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
APOBP04114 CACNA1D-203ENST00000422281 6414 ntAPPRIS ALT2 TSL 1 (best) BASIC3.46□□□□□ -1.86
APOBP04114 AC012618.3-201ENST00000415793 2042 ntTSL 5 BASIC3.46□□□□□ -1.86
APOBP04114 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC3.46□□□□□ -1.86
APOBP04114 CNNM2-202ENST00000369878 15857 ntAPPRIS P4 TSL 1 (best) BASIC3.46□□□□□ -1.86
APOBP04114 EMC2-201ENST00000220853 1243 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
APOBP04114 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
APOBP04114 SNORA62-201ENST00000365493 153 ntBASIC3.46□□□□□ -1.86
APOBP04114 MYL6P5-201ENST00000412707 459 ntBASIC3.46□□□□□ -1.86
APOBP04114 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC3.46□□□□□ -1.86
APOBP04114 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC3.46□□□□□ -1.86
APOBP04114 KCTD10P1-201ENST00000434203 625 ntBASIC3.46□□□□□ -1.86
APOBP04114 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC3.46□□□□□ -1.86
APOBP04114 SLC25A15P5-201ENST00000508033 253 ntBASIC3.46□□□□□ -1.86
APOBP04114 HPRT1P1-201ENST00000509498 657 ntBASIC3.46□□□□□ -1.86
APOBP04114 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC3.46□□□□□ -1.86
APOBP04114 AC078899.1-201ENST00000521432 1185 ntBASIC3.46□□□□□ -1.86
APOBP04114 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC3.46□□□□□ -1.86
APOBP04114 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC3.46□□□□□ -1.86
APOBP04114 AC112694.2-201ENST00000623697 768 ntBASIC3.46□□□□□ -1.86
APOBP04114 SYTL2-220ENST00000529581 1910 ntTSL 2 BASIC3.46□□□□□ -1.86
APOBP04114 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
APOBP04114 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
APOBP04114 SH3GLB1-203ENST00000535010 6227 ntTSL 2 BASIC3.45□□□□□ -1.86
APOBP04114 MYLK-205ENST00000360772 10027 ntAPPRIS P3 TSL 5 BASIC3.45□□□□□ -1.86
APOBP04114 SYTL4-203ENST00000372981 4847 ntTSL 2 BASIC3.45□□□□□ -1.86
APOBP04114 IL5RA-204ENST00000418488 5521 ntTSL 5 BASIC3.45□□□□□ -1.86
APOBP04114 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
APOBP04114 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC3.45□□□□□ -1.86
APOBP04114 SPATS2L-201ENST00000358677 6156 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
APOBP04114 SECISBP2L-201ENST00000261847 6779 ntAPPRIS P3 TSL 1 (best) BASIC3.45□□□□□ -1.86
APOBP04114 RNU1-146P-201ENST00000364015 165 ntBASIC3.45□□□□□ -1.86
APOBP04114 MRRF-207ENST00000373729 870 ntTSL 3 BASIC3.45□□□□□ -1.86
APOBP04114 AL445190.1-201ENST00000416448 288 ntTSL 5 BASIC3.45□□□□□ -1.86
APOBP04114 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC3.45□□□□□ -1.86
APOBP04114 AC023141.8-201ENST00000442554 208 ntBASIC3.45□□□□□ -1.86
APOBP04114 AC097484.1-201ENST00000471148 389 ntBASIC3.45□□□□□ -1.86
APOBP04114 CREM-230ENST00000474931 626 ntTSL 2 BASIC3.45□□□□□ -1.86
APOBP04114 C5orf64-203ENST00000505642 2970 ntTSL 2 BASIC3.45□□□□□ -1.86
APOBP04114 IGHV1-14-201ENST00000523391 241 ntBASIC3.45□□□□□ -1.86
APOBP04114 GLRXP2-201ENST00000555594 321 ntBASIC3.45□□□□□ -1.86
APOBP04114 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC3.45□□□□□ -1.86
APOBP04114 COL12A1-207ENST00000483888 9637 ntAPPRIS ALT1 TSL 5 BASIC3.45□□□□□ -1.86
APOBP04114 OR7D2-203ENST00000642043 3157 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
APOBP04114 AC068189.1-201ENST00000501164 2632 ntTSL 2 BASIC3.45□□□□□ -1.86
APOBP04114 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC3.45□□□□□ -1.86
APOBP04114 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
APOBP04114 RIOK2-202ENST00000508447 2149 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
APOBP04114 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
APOBP04114 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
APOBP04114 SCAF11-205ENST00000465950 5296 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
APOBP04114 ADGRL3-209ENST00000508693 5009 ntTSL 5 BASIC3.45□□□□□ -1.86
APOBP04114 OR2T6-202ENST00000641644 4670 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
APOBP04114 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC3.45□□□□□ -1.86
APOBP04114 LINC01920-201ENST00000441356 2528 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
APOBP04114 GPN1-203ENST00000424214 1725 ntTSL 2 BASIC3.45□□□□□ -1.86
APOBP04114 AC013442.1-201ENST00000397347 228 ntBASIC3.45□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 85.2 ms