Protein–RNA interactions for Protein: P01920

HLA-DQB1, HLA class II histocompatibility antigen, DQ beta 1 chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1P01920 AC011516.1-201ENST00000599129 180 ntTSL 3 BASIC5.03□□□□□ -1.6
HLA-DQB1P01920 AL445670.1-201ENST00000618889 801 ntBASIC5.03□□□□□ -1.6
HLA-DQB1P01920 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC5.03□□□□□ -1.6
HLA-DQB1P01920 MCM8-201ENST00000265187 3442 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
HLA-DQB1P01920 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
HLA-DQB1P01920 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
HLA-DQB1P01920 LGALS8-204ENST00000352231 1402 ntAPPRIS P4 TSL 2 BASIC5.03□□□□□ -1.6
HLA-DQB1P01920 C11orf1-203ENST00000529270 1437 ntTSL 2 BASIC5.03□□□□□ -1.6
HLA-DQB1P01920 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC5.03□□□□□ -1.6
HLA-DQB1P01920 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC5.03□□□□□ -1.6
HLA-DQB1P01920 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
HLA-DQB1P01920 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC5.03□□□□□ -1.6
HLA-DQB1P01920 SPANXN2-201ENST00000598475 1378 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
HLA-DQB1P01920 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
HLA-DQB1P01920 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
HLA-DQB1P01920 HSPD1P7-201ENST00000447985 1686 ntBASIC5.02□□□□□ -1.61
HLA-DQB1P01920 AP001157.1-201ENST00000550837 2339 ntBASIC5.02□□□□□ -1.61
HLA-DQB1P01920 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
HLA-DQB1P01920 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
HLA-DQB1P01920 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
HLA-DQB1P01920 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC5.02□□□□□ -1.61
HLA-DQB1P01920 PKN2-202ENST00000370513 2890 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
HLA-DQB1P01920 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
HLA-DQB1P01920 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
HLA-DQB1P01920 OR9K1P-201ENST00000326513 941 ntBASIC5.02□□□□□ -1.61
HLA-DQB1P01920 SEC61G-201ENST00000352861 462 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
HLA-DQB1P01920 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC5.02□□□□□ -1.61
HLA-DQB1P01920 TCEAL8-201ENST00000360000 1131 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
HLA-DQB1P01920 RN7SKP74-201ENST00000362849 309 ntBASIC5.02□□□□□ -1.61
HLA-DQB1P01920 TCEAL8-202ENST00000372685 1222 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
HLA-DQB1P01920 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
HLA-DQB1P01920 IGLV3-10-201ENST00000390315 382 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
HLA-DQB1P01920 U3.28-201ENST00000391249 210 ntBASIC5.02□□□□□ -1.61
HLA-DQB1P01920 GGA1-205ENST00000405147 575 ntTSL 4 BASIC5.02□□□□□ -1.61
HLA-DQB1P01920 ZNF37CP-201ENST00000406795 241 ntBASIC5.02□□□□□ -1.61
HLA-DQB1P01920 UBTFL2-201ENST00000411859 1191 ntBASIC5.02□□□□□ -1.61
HLA-DQB1P01920 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC5.02□□□□□ -1.61
HLA-DQB1P01920 AL360013.1-201ENST00000419031 858 ntBASIC5.02□□□□□ -1.61
HLA-DQB1P01920 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC5.02□□□□□ -1.61
HLA-DQB1P01920 ICA1L-210ENST00000425178 879 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
HLA-DQB1P01920 OR6R1P-201ENST00000431838 940 ntBASIC5.02□□□□□ -1.61
HLA-DQB1P01920 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC5.02□□□□□ -1.61
HLA-DQB1P01920 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC5.02□□□□□ -1.61
HLA-DQB1P01920 FBXW12-203ENST00000436231 1117 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
HLA-DQB1P01920 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC5.02□□□□□ -1.61
HLA-DQB1P01920 RPS12P17-201ENST00000438591 377 ntBASIC5.02□□□□□ -1.61
HLA-DQB1P01920 AL451164.3-201ENST00000441377 447 ntTSL 5 BASIC5.02□□□□□ -1.61
HLA-DQB1P01920 AC234771.4-201ENST00000441416 730 ntBASIC5.02□□□□□ -1.61
HLA-DQB1P01920 AC136489.1-203ENST00000450246 736 ntTSL 5 BASIC5.02□□□□□ -1.61
HLA-DQB1P01920 OR52E3P-201ENST00000452083 936 ntBASIC5.02□□□□□ -1.61
HLA-DQB1P01920 RPL31P11-202ENST00000454082 372 ntBASIC5.02□□□□□ -1.61
HLA-DQB1P01920 AC104164.1-201ENST00000460282 590 ntBASIC5.02□□□□□ -1.61
HLA-DQB1P01920 AC005165.2-201ENST00000466070 380 ntBASIC5.02□□□□□ -1.61
HLA-DQB1P01920 AP003385.3-201ENST00000472498 287 ntBASIC5.02□□□□□ -1.61
HLA-DQB1P01920 OR7E22P-201ENST00000478335 1035 ntBASIC5.02□□□□□ -1.61
HLA-DQB1P01920 RN7SL104P-201ENST00000498686 293 ntBASIC5.02□□□□□ -1.61
HLA-DQB1P01920 AC108063.1-201ENST00000513586 414 ntTSL 3 BASIC5.02□□□□□ -1.61
HLA-DQB1P01920 RAD21-204ENST00000518055 896 ntTSL 2 BASIC5.02□□□□□ -1.61
HLA-DQB1P01920 AC021269.1-201ENST00000526860 705 ntBASIC5.02□□□□□ -1.61
HLA-DQB1P01920 AP004607.5-201ENST00000532034 217 ntBASIC5.02□□□□□ -1.61
HLA-DQB1P01920 AC005833.3-202ENST00000544741 770 ntAPPRIS P1 TSL 3 BASIC5.02□□□□□ -1.61
HLA-DQB1P01920 BICD1-206ENST00000551086 423 ntTSL 3 BASIC5.02□□□□□ -1.61
HLA-DQB1P01920 Z98949.1-228ENST00000595093 798 ntTSL 5 BASIC5.02□□□□□ -1.61
HLA-DQB1P01920 OR7A8P-201ENST00000595427 913 ntBASIC5.02□□□□□ -1.61
HLA-DQB1P01920 AC036176.3-201ENST00000602456 418 ntBASIC5.02□□□□□ -1.61
HLA-DQB1P01920 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC5.02□□□□□ -1.61
HLA-DQB1P01920 Metazoa_SRP.66-201ENST00000615609 282 ntBASIC5.02□□□□□ -1.61
HLA-DQB1P01920 MIR6811-201ENST00000620409 58 ntBASIC5.02□□□□□ -1.61
HLA-DQB1P01920 AC016542.2-201ENST00000624201 619 ntBASIC5.02□□□□□ -1.61
HLA-DQB1P01920 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
HLA-DQB1P01920 AC025574.1-201ENST00000554784 1653 ntBASIC5.02□□□□□ -1.61
HLA-DQB1P01920 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
HLA-DQB1P01920 AL442128.2-201ENST00000620246 1824 ntBASIC5.02□□□□□ -1.61
HLA-DQB1P01920 PTPRD-AS1-201ENST00000430766 1959 ntTSL 2 BASIC5.02□□□□□ -1.61
HLA-DQB1P01920 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC5.02□□□□□ -1.61
HLA-DQB1P01920 PAPD4-203ENST00000428308 2204 ntAPPRIS P3 TSL 2 BASIC5.01□□□□□ -1.61
HLA-DQB1P01920 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
HLA-DQB1P01920 ANTXR2-204ENST00000404191 1469 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
HLA-DQB1P01920 EIF3EP1-201ENST00000433978 1316 ntBASIC5.01□□□□□ -1.61
HLA-DQB1P01920 CEACAM1-213ENST00000599389 1342 ntTSL 5 BASIC5.01□□□□□ -1.61
HLA-DQB1P01920 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
HLA-DQB1P01920 AL121839.2-201ENST00000565058 6943 ntBASIC5.01□□□□□ -1.61
HLA-DQB1P01920 SPATA9-201ENST00000274432 1100 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
HLA-DQB1P01920 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
HLA-DQB1P01920 OR4Q3-201ENST00000331723 942 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
HLA-DQB1P01920 RNA5SP485-201ENST00000365053 119 ntBASIC5.01□□□□□ -1.61
HLA-DQB1P01920 SAMD13-203ENST00000370670 565 ntAPPRIS P1 TSL 4 BASIC5.01□□□□□ -1.61
HLA-DQB1P01920 AC003045.1-201ENST00000398779 713 ntBASIC5.01□□□□□ -1.61
HLA-DQB1P01920 MIR1266-201ENST00000408125 84 ntBASIC5.01□□□□□ -1.61
HLA-DQB1P01920 LINC00354-201ENST00000412119 347 ntTSL 5 BASIC5.01□□□□□ -1.61
HLA-DQB1P01920 LIX1L-AS1-202ENST00000412239 570 ntTSL 2 BASIC5.01□□□□□ -1.61
HLA-DQB1P01920 OR52N3P-201ENST00000413417 934 ntBASIC5.01□□□□□ -1.61
HLA-DQB1P01920 GNG5P5-201ENST00000420444 220 ntBASIC5.01□□□□□ -1.61
HLA-DQB1P01920 AC099677.3-201ENST00000427081 395 ntBASIC5.01□□□□□ -1.61
HLA-DQB1P01920 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC5.01□□□□□ -1.61
HLA-DQB1P01920 NPM1P25-201ENST00000429734 854 ntBASIC5.01□□□□□ -1.61
HLA-DQB1P01920 AC094019.1-201ENST00000434678 472 ntBASIC5.01□□□□□ -1.61
HLA-DQB1P01920 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC5.01□□□□□ -1.61
HLA-DQB1P01920 COX4I1P2-201ENST00000447446 547 ntBASIC5.01□□□□□ -1.61
HLA-DQB1P01920 AC097359.1-201ENST00000447946 463 ntBASIC5.01□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 82 ms