Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 RNA5SP441-201ENST00000516809 88 ntBASIC5.65□□□□□ -1.5
NKX2-2O95096 AC130365.2-201ENST00000525882 1201 ntBASIC5.65□□□□□ -1.5
NKX2-2O95096 OLR1-210ENST00000544577 924 ntTSL 5 BASIC5.65□□□□□ -1.5
NKX2-2O95096 MRPS21P9-201ENST00000571150 257 ntBASIC5.65□□□□□ -1.5
NKX2-2O95096 AC106037.2-201ENST00000578583 447 ntTSL 5 BASIC5.65□□□□□ -1.5
NKX2-2O95096 CBLN2-208ENST00000584764 543 ntTSL 4 BASIC5.65□□□□□ -1.5
NKX2-2O95096 AC119403.2-201ENST00000590960 598 ntBASIC5.65□□□□□ -1.5
NKX2-2O95096 AC083798.2-201ENST00000608756 1152 ntTSL 4 BASIC5.65□□□□□ -1.5
NKX2-2O95096 uc_338.31-201ENST00000615595 186 ntBASIC5.65□□□□□ -1.5
NKX2-2O95096 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC5.65□□□□□ -1.5
NKX2-2O95096 AP003499.2-201ENST00000624100 483 ntBASIC5.65□□□□□ -1.5
NKX2-2O95096 OR56A4-203ENST00000641279 1209 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
NKX2-2O95096 ALB-220ENST00000621628 1606 ntTSL 5 BASIC5.65□□□□□ -1.51
NKX2-2O95096 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
NKX2-2O95096 AC007278.1-201ENST00000450893 1327 ntTSL 3 BASIC5.65□□□□□ -1.51
NKX2-2O95096 DPCR1-202ENST00000462446 5314 ntAPPRIS P2 TSL 5 BASIC5.65□□□□□ -1.51
NKX2-2O95096 MYPN-202ENST00000358913 6013 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
NKX2-2O95096 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC5.65□□□□□ -1.51
NKX2-2O95096 RXFP1-211ENST00000613319 3771 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
NKX2-2O95096 SRGAP1-207ENST00000631006 8406 ntTSL 5 BASIC5.65□□□□□ -1.51
NKX2-2O95096 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC5.65□□□□□ -1.51
NKX2-2O95096 DDX6P1-205ENST00000441966 1436 ntBASIC5.65□□□□□ -1.51
NKX2-2O95096 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC5.65□□□□□ -1.51
NKX2-2O95096 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC5.65□□□□□ -1.51
NKX2-2O95096 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
NKX2-2O95096 ZNF532-201ENST00000336078 6696 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
NKX2-2O95096 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
NKX2-2O95096 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC5.64□□□□□ -1.51
NKX2-2O95096 AC137056.2-201ENST00000624055 1958 ntBASIC5.64□□□□□ -1.51
NKX2-2O95096 DAZ2-204ENST00000382431 3637 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
NKX2-2O95096 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC5.64□□□□□ -1.51
NKX2-2O95096 DOCK9-208ENST00000448493 7887 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
NKX2-2O95096 ACOD1-202ENST00000449753 2097 ntAPPRIS ALT2 TSL 3 BASIC5.64□□□□□ -1.51
NKX2-2O95096 NUP37-201ENST00000251074 1203 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
NKX2-2O95096 RNU1-59P-201ENST00000364829 162 ntBASIC5.64□□□□□ -1.51
NKX2-2O95096 RNA5-8SP5-201ENST00000365304 152 ntBASIC5.64□□□□□ -1.51
NKX2-2O95096 SNORA70.9-201ENST00000384370 135 ntBASIC5.64□□□□□ -1.51
NKX2-2O95096 RN7SKP166-201ENST00000410812 305 ntBASIC5.64□□□□□ -1.51
NKX2-2O95096 AL096829.1-201ENST00000413677 457 ntBASIC5.64□□□□□ -1.51
NKX2-2O95096 MTND4LP17-201ENST00000414607 293 ntBASIC5.64□□□□□ -1.51
NKX2-2O95096 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC5.64□□□□□ -1.51
NKX2-2O95096 AL139158.1-201ENST00000424719 340 ntBASIC5.64□□□□□ -1.51
NKX2-2O95096 AL008723.2-201ENST00000426354 562 ntTSL 4 BASIC5.64□□□□□ -1.51
NKX2-2O95096 EIF2S2P3-201ENST00000428356 999 ntBASIC5.64□□□□□ -1.51
NKX2-2O95096 CCNB1IP1P1-201ENST00000428976 839 ntBASIC5.64□□□□□ -1.51
NKX2-2O95096 RPSAP65-201ENST00000429660 595 ntBASIC5.64□□□□□ -1.51
NKX2-2O95096 AC108479.1-201ENST00000431142 427 ntBASIC5.64□□□□□ -1.51
NKX2-2O95096 FAM53B-AS1-201ENST00000432699 558 ntTSL 2 BASIC5.64□□□□□ -1.51
NKX2-2O95096 AC074367.1-201ENST00000438685 1125 ntBASIC5.64□□□□□ -1.51
NKX2-2O95096 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC5.64□□□□□ -1.51
NKX2-2O95096 MTND2P25-201ENST00000449028 610 ntBASIC5.64□□□□□ -1.51
NKX2-2O95096 BUD31P2-201ENST00000449374 300 ntBASIC5.64□□□□□ -1.51
NKX2-2O95096 MTND3P24-201ENST00000506306 329 ntBASIC5.64□□□□□ -1.51
NKX2-2O95096 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC5.64□□□□□ -1.51
NKX2-2O95096 CR383658.1-201ENST00000514609 734 ntBASIC5.64□□□□□ -1.51
NKX2-2O95096 SUMO2P19-201ENST00000518920 295 ntBASIC5.64□□□□□ -1.51
NKX2-2O95096 AC084125.1-201ENST00000525461 429 ntTSL 3 BASIC5.64□□□□□ -1.51
NKX2-2O95096 AC022075.3-201ENST00000539009 649 ntTSL 3 BASIC5.64□□□□□ -1.51
NKX2-2O95096 ETFRF1-202ENST00000553788 708 ntTSL 3 BASIC5.64□□□□□ -1.51
NKX2-2O95096 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
NKX2-2O95096 AL136520.1-202ENST00000555494 763 ntBASIC5.64□□□□□ -1.51
NKX2-2O95096 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC5.64□□□□□ -1.51
NKX2-2O95096 AC005544.1-201ENST00000584277 460 ntTSL 3 BASIC5.64□□□□□ -1.51
NKX2-2O95096 AC127024.4-201ENST00000585212 308 ntTSL 5 BASIC5.64□□□□□ -1.51
NKX2-2O95096 MIR132-201ENST00000591554 101 ntBASIC5.64□□□□□ -1.51
NKX2-2O95096 LINC01999-201ENST00000592917 646 ntTSL 2 BASIC5.64□□□□□ -1.51
NKX2-2O95096 LINC01198-204ENST00000594153 552 ntTSL 3 BASIC5.64□□□□□ -1.51
NKX2-2O95096 Z98949.1-228ENST00000595093 798 ntTSL 5 BASIC5.64□□□□□ -1.51
NKX2-2O95096 AL133247.2-201ENST00000603236 482 ntBASIC5.64□□□□□ -1.51
NKX2-2O95096 AC067838.1-201ENST00000606064 577 ntBASIC5.64□□□□□ -1.51
NKX2-2O95096 AC005828.7-201ENST00000607331 556 ntBASIC5.64□□□□□ -1.51
NKX2-2O95096 U1.25-201ENST00000614085 162 ntBASIC5.64□□□□□ -1.51
NKX2-2O95096 AC096861.1-201ENST00000616652 240 ntBASIC5.64□□□□□ -1.51
NKX2-2O95096 CKLF-CMTM1-206ENST00000616804 678 ntAPPRIS ALT2 TSL 2 BASIC5.64□□□□□ -1.51
NKX2-2O95096 U1.34-201ENST00000618578 162 ntBASIC5.64□□□□□ -1.51
NKX2-2O95096 AC241377.1-201ENST00000619797 406 ntBASIC5.64□□□□□ -1.51
NKX2-2O95096 U1.31-201ENST00000620022 160 ntBASIC5.64□□□□□ -1.51
NKX2-2O95096 AP002371.2-201ENST00000624450 503 ntBASIC5.64□□□□□ -1.51
NKX2-2O95096 TEX41-293ENST00000630451 690 ntTSL 5 BASIC5.64□□□□□ -1.51
NKX2-2O95096 AC073488.6-201ENST00000632293 754 ntBASIC5.64□□□□□ -1.51
NKX2-2O95096 AL357140.4-201ENST00000636827 412 ntBASIC5.64□□□□□ -1.51
NKX2-2O95096 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC5.64□□□□□ -1.51
NKX2-2O95096 EEF1A1P30-201ENST00000429708 1315 ntBASIC5.64□□□□□ -1.51
NKX2-2O95096 AGBL1-201ENST00000441037 3551 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
NKX2-2O95096 SSH1-202ENST00000326495 13040 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
NKX2-2O95096 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC5.64□□□□□ -1.51
NKX2-2O95096 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC5.64□□□□□ -1.51
NKX2-2O95096 AC027575.3-201ENST00000583058 2747 ntBASIC5.64□□□□□ -1.51
NKX2-2O95096 DYNC2LI1-201ENST00000260605 1399 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
NKX2-2O95096 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
NKX2-2O95096 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
NKX2-2O95096 LCP1-201ENST00000323076 3787 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
NKX2-2O95096 PIH1D3-203ENST00000535523 1926 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
NKX2-2O95096 KLHL2-210ENST00000538127 2907 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
NKX2-2O95096 AASDH-203ENST00000502617 3004 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
NKX2-2O95096 ERMARD-202ENST00000366772 2003 ntTSL 5 BASIC5.64□□□□□ -1.51
NKX2-2O95096 APOL6-201ENST00000409652 10121 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
NKX2-2O95096 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
NKX2-2O95096 AC005725.1-201ENST00000577346 2607 ntBASIC5.63□□□□□ -1.51
NKX2-2O95096 CNOT4-205ENST00000423368 3297 ntAPPRIS ALT1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 72.8 ms