Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 AC021269.1-201ENST00000526860 705 ntBASIC3.11□□□□□ -1.91
CHKB-CPT1BH3BT56 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC3.11□□□□□ -1.91
CHKB-CPT1BH3BT56 AP000851.1-202ENST00000542119 743 ntTSL 3 BASIC3.11□□□□□ -1.91
CHKB-CPT1BH3BT56 C12orf73-203ENST00000546540 590 ntTSL 2 BASIC3.11□□□□□ -1.91
CHKB-CPT1BH3BT56 AC011595.1-201ENST00000548901 753 ntTSL 3 BASIC3.11□□□□□ -1.91
CHKB-CPT1BH3BT56 RACGAP1-216ENST00000548961 387 ntTSL 3 BASIC3.11□□□□□ -1.91
CHKB-CPT1BH3BT56 LINC02457-201ENST00000552992 596 ntTSL 4 BASIC3.11□□□□□ -1.91
CHKB-CPT1BH3BT56 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC3.11□□□□□ -1.91
CHKB-CPT1BH3BT56 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC3.11□□□□□ -1.91
CHKB-CPT1BH3BT56 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC3.11□□□□□ -1.91
CHKB-CPT1BH3BT56 AC024267.3-201ENST00000579673 562 ntTSL 5 BASIC3.11□□□□□ -1.91
CHKB-CPT1BH3BT56 RN7SL711P-201ENST00000579731 299 ntBASIC3.11□□□□□ -1.91
CHKB-CPT1BH3BT56 AC110603.1-201ENST00000580645 468 ntTSL 3 BASIC3.11□□□□□ -1.91
CHKB-CPT1BH3BT56 AC134669.1-201ENST00000581275 672 ntBASIC3.11□□□□□ -1.91
CHKB-CPT1BH3BT56 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC3.11□□□□□ -1.91
CHKB-CPT1BH3BT56 AL050343.1-203ENST00000586761 1290 ntTSL 3 BASIC3.11□□□□□ -1.91
CHKB-CPT1BH3BT56 AC008991.2-201ENST00000587850 487 ntTSL 3 BASIC3.11□□□□□ -1.91
CHKB-CPT1BH3BT56 AL161725.1-210ENST00000590240 1224 ntTSL 5 BASIC3.11□□□□□ -1.91
CHKB-CPT1BH3BT56 LINC01533-204ENST00000590719 435 ntTSL 5 BASIC3.11□□□□□ -1.91
CHKB-CPT1BH3BT56 AC104984.6-201ENST00000591928 360 ntTSL 3 BASIC3.11□□□□□ -1.91
CHKB-CPT1BH3BT56 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
CHKB-CPT1BH3BT56 AC019257.2-201ENST00000605539 497 ntBASIC3.11□□□□□ -1.91
CHKB-CPT1BH3BT56 NQO2-209ENST00000606474 470 ntTSL 3 BASIC3.11□□□□□ -1.91
CHKB-CPT1BH3BT56 RN7SKP290-201ENST00000606842 195 ntBASIC3.11□□□□□ -1.91
CHKB-CPT1BH3BT56 AL591686.2-201ENST00000608241 475 ntTSL 4 BASIC3.11□□□□□ -1.91
CHKB-CPT1BH3BT56 MIR663AHG-230ENST00000609012 708 ntTSL 5 BASIC3.11□□□□□ -1.91
CHKB-CPT1BH3BT56 AC010632.3-201ENST00000611377 369 ntBASIC3.11□□□□□ -1.91
CHKB-CPT1BH3BT56 AC037198.3-201ENST00000616754 526 ntBASIC3.11□□□□□ -1.91
CHKB-CPT1BH3BT56 AC018558.4-201ENST00000622153 281 ntBASIC3.11□□□□□ -1.91
CHKB-CPT1BH3BT56 AC073263.3-201ENST00000624449 858 ntBASIC3.11□□□□□ -1.91
CHKB-CPT1BH3BT56 CYP2C8-213ENST00000628935 924 ntTSL 5 BASIC3.11□□□□□ -1.91
CHKB-CPT1BH3BT56 TEX41-293ENST00000630451 690 ntTSL 5 BASIC3.11□□□□□ -1.91
CHKB-CPT1BH3BT56 AC073488.6-201ENST00000632293 754 ntBASIC3.11□□□□□ -1.91
CHKB-CPT1BH3BT56 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
CHKB-CPT1BH3BT56 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC3.11□□□□□ -1.91
CHKB-CPT1BH3BT56 AC007382.1-201ENST00000624376 2618 ntBASIC3.11□□□□□ -1.91
CHKB-CPT1BH3BT56 AC022417.1-201ENST00000624768 1303 ntBASIC3.11□□□□□ -1.91
CHKB-CPT1BH3BT56 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC3.11□□□□□ -1.91
CHKB-CPT1BH3BT56 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC3.11□□□□□ -1.91
CHKB-CPT1BH3BT56 SOHLH2-202ENST00000379881 2193 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
CHKB-CPT1BH3BT56 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
CHKB-CPT1BH3BT56 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
CHKB-CPT1BH3BT56 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC3.11□□□□□ -1.91
CHKB-CPT1BH3BT56 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC3.11□□□□□ -1.91
CHKB-CPT1BH3BT56 ZNF85-202ENST00000328178 2296 ntAPPRIS P2 TSL 1 (best) BASIC3.1□□□□□ -1.91
CHKB-CPT1BH3BT56 NPIPB15-201ENST00000429990 1428 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
CHKB-CPT1BH3BT56 SCARNA15-201ENST00000607520 4325 ntBASIC3.1□□□□□ -1.91
CHKB-CPT1BH3BT56 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC3.1□□□□□ -1.91
CHKB-CPT1BH3BT56 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC3.1□□□□□ -1.91
CHKB-CPT1BH3BT56 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
CHKB-CPT1BH3BT56 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
CHKB-CPT1BH3BT56 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC3.1□□□□□ -1.91
CHKB-CPT1BH3BT56 CCL2-201ENST00000225831 741 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
CHKB-CPT1BH3BT56 OR1D2-201ENST00000331459 939 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
CHKB-CPT1BH3BT56 ATF3-201ENST00000336937 482 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
CHKB-CPT1BH3BT56 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
CHKB-CPT1BH3BT56 RNA5SP28-201ENST00000363841 119 ntBASIC3.1□□□□□ -1.91
CHKB-CPT1BH3BT56 RNA5SP396-201ENST00000364834 120 ntBASIC3.1□□□□□ -1.91
CHKB-CPT1BH3BT56 RN7SKP189-201ENST00000365042 330 ntBASIC3.1□□□□□ -1.91
CHKB-CPT1BH3BT56 SNORA70.5-201ENST00000365519 135 ntBASIC3.1□□□□□ -1.91
CHKB-CPT1BH3BT56 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
CHKB-CPT1BH3BT56 GCG-201ENST00000375497 799 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
CHKB-CPT1BH3BT56 TPT1-204ENST00000379060 764 ntTSL 5 BASIC3.1□□□□□ -1.91
CHKB-CPT1BH3BT56 IFNA14-201ENST00000380222 990 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
CHKB-CPT1BH3BT56 MSRB1P1-201ENST00000396851 354 ntBASIC3.1□□□□□ -1.91
CHKB-CPT1BH3BT56 LAP3P1-201ENST00000403648 294 ntBASIC3.1□□□□□ -1.91
CHKB-CPT1BH3BT56 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
CHKB-CPT1BH3BT56 RN7SKP166-201ENST00000410812 305 ntBASIC3.1□□□□□ -1.91
CHKB-CPT1BH3BT56 RN7SKP270-201ENST00000411297 312 ntBASIC3.1□□□□□ -1.91
CHKB-CPT1BH3BT56 MYL6P5-201ENST00000412707 459 ntBASIC3.1□□□□□ -1.91
CHKB-CPT1BH3BT56 RPS14P4-201ENST00000415880 418 ntBASIC3.1□□□□□ -1.91
CHKB-CPT1BH3BT56 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC3.1□□□□□ -1.91
CHKB-CPT1BH3BT56 ATG4AP1-201ENST00000416893 538 ntBASIC3.1□□□□□ -1.91
CHKB-CPT1BH3BT56 AL031005.1-201ENST00000416959 723 ntTSL 3 BASIC3.1□□□□□ -1.91
CHKB-CPT1BH3BT56 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC3.1□□□□□ -1.91
CHKB-CPT1BH3BT56 AL139184.1-202ENST00000422303 222 ntBASIC3.1□□□□□ -1.91
CHKB-CPT1BH3BT56 SNHG26-202ENST00000422542 1106 ntTSL 3 BASIC3.1□□□□□ -1.91
CHKB-CPT1BH3BT56 IPMKP1-201ENST00000425988 855 ntBASIC3.1□□□□□ -1.91
CHKB-CPT1BH3BT56 RANP5-201ENST00000427731 655 ntBASIC3.1□□□□□ -1.91
CHKB-CPT1BH3BT56 AC016766.1-201ENST00000429636 714 ntTSL 3 BASIC3.1□□□□□ -1.91
CHKB-CPT1BH3BT56 FAF2P1-201ENST00000429974 1298 ntBASIC3.1□□□□□ -1.91
CHKB-CPT1BH3BT56 AC242426.1-201ENST00000435270 960 ntBASIC3.1□□□□□ -1.91
CHKB-CPT1BH3BT56 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
CHKB-CPT1BH3BT56 BMS1P10-201ENST00000443754 1120 ntBASIC3.1□□□□□ -1.91
CHKB-CPT1BH3BT56 GEMIN8P3-201ENST00000445417 720 ntBASIC3.1□□□□□ -1.91
CHKB-CPT1BH3BT56 AC026391.1-201ENST00000450677 537 ntTSL 3 BASIC3.1□□□□□ -1.91
CHKB-CPT1BH3BT56 RPL26P30-201ENST00000453533 435 ntBASIC3.1□□□□□ -1.91
CHKB-CPT1BH3BT56 FRG2FP-204ENST00000453982 852 ntBASIC3.1□□□□□ -1.91
CHKB-CPT1BH3BT56 AC073130.1-202ENST00000454897 587 ntTSL 2 BASIC3.1□□□□□ -1.91
CHKB-CPT1BH3BT56 AL096803.1-201ENST00000456921 1021 ntBASIC3.1□□□□□ -1.91
CHKB-CPT1BH3BT56 RN7SKP198-201ENST00000459286 306 ntBASIC3.1□□□□□ -1.91
CHKB-CPT1BH3BT56 AC099340.1-201ENST00000475247 599 ntBASIC3.1□□□□□ -1.91
CHKB-CPT1BH3BT56 FAM107B-217ENST00000478076 790 ntAPPRIS P1 TSL 4 BASIC3.1□□□□□ -1.91
CHKB-CPT1BH3BT56 AC026254.1-201ENST00000479473 431 ntBASIC3.1□□□□□ -1.91
CHKB-CPT1BH3BT56 PFN2-209ENST00000481275 560 ntTSL 4 BASIC3.1□□□□□ -1.91
CHKB-CPT1BH3BT56 LINC02025-201ENST00000488348 360 ntTSL 3 BASIC3.1□□□□□ -1.91
CHKB-CPT1BH3BT56 AC073358.1-201ENST00000505671 684 ntBASIC3.1□□□□□ -1.91
CHKB-CPT1BH3BT56 HMGB3P16-201ENST00000508037 287 ntBASIC3.1□□□□□ -1.91
CHKB-CPT1BH3BT56 AC027315.1-201ENST00000511592 469 ntTSL 3 BASIC3.1□□□□□ -1.91
CHKB-CPT1BH3BT56 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC3.1□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 157.1 ms