Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 RPL7AP51-201ENST00000422016 760 ntBASIC6.07□□□□□ -1.44
TCRBV7S3A2A0A539 AC000095.2-201ENST00000424407 768 ntTSL 2 BASIC6.07□□□□□ -1.44
TCRBV7S3A2A0A539 HNRNPA1P18-201ENST00000433537 927 ntBASIC6.07□□□□□ -1.44
TCRBV7S3A2A0A539 AL513348.1-201ENST00000435554 440 ntTSL 3 BASIC6.07□□□□□ -1.44
TCRBV7S3A2A0A539 AC023141.3-201ENST00000436698 278 ntBASIC6.07□□□□□ -1.44
TCRBV7S3A2A0A539 AC096632.2-201ENST00000438139 1239 ntBASIC6.07□□□□□ -1.44
TCRBV7S3A2A0A539 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC6.07□□□□□ -1.44
TCRBV7S3A2A0A539 AL606490.8-201ENST00000441624 319 ntBASIC6.07□□□□□ -1.44
TCRBV7S3A2A0A539 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC6.07□□□□□ -1.44
TCRBV7S3A2A0A539 MORF4L1P4-201ENST00000450245 976 ntBASIC6.07□□□□□ -1.44
TCRBV7S3A2A0A539 AC002553.3-201ENST00000453002 341 ntBASIC6.07□□□□□ -1.44
TCRBV7S3A2A0A539 OSTCP1-201ENST00000455507 450 ntBASIC6.07□□□□□ -1.44
TCRBV7S3A2A0A539 AL603882.1-201ENST00000463059 681 ntBASIC6.07□□□□□ -1.44
TCRBV7S3A2A0A539 AC106822.1-201ENST00000502647 526 ntBASIC6.07□□□□□ -1.44
TCRBV7S3A2A0A539 LINC02492-201ENST00000502952 564 ntTSL 5 BASIC6.07□□□□□ -1.44
TCRBV7S3A2A0A539 MTND3P24-201ENST00000506306 329 ntBASIC6.07□□□□□ -1.44
TCRBV7S3A2A0A539 SPINK13-203ENST00000512953 1022 ntAPPRIS P2 TSL 2 BASIC6.07□□□□□ -1.44
TCRBV7S3A2A0A539 PMP2-202ENST00000519260 1264 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
TCRBV7S3A2A0A539 AC116917.1-201ENST00000520558 305 ntBASIC6.07□□□□□ -1.44
TCRBV7S3A2A0A539 AP003100.1-201ENST00000524772 832 ntTSL 3 BASIC6.07□□□□□ -1.44
TCRBV7S3A2A0A539 AP003049.1-201ENST00000529418 457 ntBASIC6.07□□□□□ -1.44
TCRBV7S3A2A0A539 SOX9-AS1-211ENST00000533179 460 ntTSL 3 BASIC6.07□□□□□ -1.44
TCRBV7S3A2A0A539 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC6.07□□□□□ -1.44
TCRBV7S3A2A0A539 MRPS21P8-201ENST00000569196 235 ntBASIC6.07□□□□□ -1.44
TCRBV7S3A2A0A539 AC106037.2-201ENST00000578583 447 ntTSL 5 BASIC6.07□□□□□ -1.44
TCRBV7S3A2A0A539 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC6.07□□□□□ -1.44
TCRBV7S3A2A0A539 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC6.07□□□□□ -1.44
TCRBV7S3A2A0A539 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC6.07□□□□□ -1.44
TCRBV7S3A2A0A539 AC098483.2-201ENST00000603158 454 ntBASIC6.07□□□□□ -1.44
TCRBV7S3A2A0A539 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC6.07□□□□□ -1.44
TCRBV7S3A2A0A539 AL512506.1-201ENST00000613918 449 ntBASIC6.07□□□□□ -1.44
TCRBV7S3A2A0A539 MIR6774-201ENST00000614651 70 ntBASIC6.07□□□□□ -1.44
TCRBV7S3A2A0A539 AL512652.1-201ENST00000619006 500 ntBASIC6.07□□□□□ -1.44
TCRBV7S3A2A0A539 AC009234.1-201ENST00000634985 895 ntTSL 5 BASIC6.07□□□□□ -1.44
TCRBV7S3A2A0A539 AC000095.2-202ENST00000637415 154 ntBASIC6.07□□□□□ -1.44
TCRBV7S3A2A0A539 AC119674.1-220ENST00000641502 1048 ntBASIC6.07□□□□□ -1.44
TCRBV7S3A2A0A539 DNAH2-201ENST00000389173 13505 ntAPPRIS P1 TSL 2 BASIC6.07□□□□□ -1.44
TCRBV7S3A2A0A539 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
TCRBV7S3A2A0A539 ZNF311-203ENST00000377179 2730 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
TCRBV7S3A2A0A539 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
TCRBV7S3A2A0A539 DCC-203ENST00000442544 10206 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
TCRBV7S3A2A0A539 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
TCRBV7S3A2A0A539 LINC01958-201ENST00000637749 1941 ntTSL 5 BASIC6.07□□□□□ -1.44
TCRBV7S3A2A0A539 DCN-204ENST00000425043 1438 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
TCRBV7S3A2A0A539 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC6.07□□□□□ -1.44
TCRBV7S3A2A0A539 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC6.07□□□□□ -1.44
TCRBV7S3A2A0A539 VEPH1-202ENST00000392832 3044 ntAPPRIS P1 TSL 2 BASIC6.07□□□□□ -1.44
TCRBV7S3A2A0A539 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC6.07□□□□□ -1.44
TCRBV7S3A2A0A539 LGI1-219ENST00000636155 1618 ntTSL 5 BASIC6.07□□□□□ -1.44
TCRBV7S3A2A0A539 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC6.06□□□□□ -1.44
TCRBV7S3A2A0A539 LINC02388-201ENST00000550678 1975 ntTSL 2 BASIC6.06□□□□□ -1.44
TCRBV7S3A2A0A539 HEPH-206ENST00000441993 4310 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
TCRBV7S3A2A0A539 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
TCRBV7S3A2A0A539 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
TCRBV7S3A2A0A539 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
TCRBV7S3A2A0A539 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
TCRBV7S3A2A0A539 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC6.06□□□□□ -1.44
TCRBV7S3A2A0A539 RNA5SP211-201ENST00000365516 117 ntBASIC6.06□□□□□ -1.44
TCRBV7S3A2A0A539 AL357078.2-201ENST00000416486 427 ntBASIC6.06□□□□□ -1.44
TCRBV7S3A2A0A539 RCC2P2-201ENST00000422174 918 ntBASIC6.06□□□□□ -1.44
TCRBV7S3A2A0A539 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC6.06□□□□□ -1.44
TCRBV7S3A2A0A539 MRPS33P4-201ENST00000434892 317 ntBASIC6.06□□□□□ -1.44
TCRBV7S3A2A0A539 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC6.06□□□□□ -1.44
TCRBV7S3A2A0A539 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
TCRBV7S3A2A0A539 FTLP8-201ENST00000446770 267 ntBASIC6.06□□□□□ -1.44
TCRBV7S3A2A0A539 AP000547.1-201ENST00000454360 617 ntBASIC6.06□□□□□ -1.44
TCRBV7S3A2A0A539 AC104164.1-201ENST00000460282 590 ntBASIC6.06□□□□□ -1.44
TCRBV7S3A2A0A539 AC004890.1-201ENST00000461005 181 ntBASIC6.06□□□□□ -1.44
TCRBV7S3A2A0A539 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
TCRBV7S3A2A0A539 NPM1P28-201ENST00000492269 840 ntBASIC6.06□□□□□ -1.44
TCRBV7S3A2A0A539 OR7E99P-201ENST00000505750 922 ntBASIC6.06□□□□□ -1.44
TCRBV7S3A2A0A539 AC090541.1-201ENST00000519803 467 ntTSL 3 BASIC6.06□□□□□ -1.44
TCRBV7S3A2A0A539 TMEM68-213ENST00000522576 826 ntTSL 2 BASIC6.06□□□□□ -1.44
TCRBV7S3A2A0A539 OR56A7P-201ENST00000524865 941 ntBASIC6.06□□□□□ -1.44
TCRBV7S3A2A0A539 AP003080.1-202ENST00000526526 915 ntBASIC6.06□□□□□ -1.44
TCRBV7S3A2A0A539 AP001000.1-201ENST00000526843 742 ntBASIC6.06□□□□□ -1.44
TCRBV7S3A2A0A539 AL137224.1-201ENST00000527984 389 ntTSL 2 BASIC6.06□□□□□ -1.44
TCRBV7S3A2A0A539 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC6.06□□□□□ -1.44
TCRBV7S3A2A0A539 AC090424.1-201ENST00000535243 736 ntBASIC6.06□□□□□ -1.44
TCRBV7S3A2A0A539 LINC02420-201ENST00000543387 741 ntTSL 5 BASIC6.06□□□□□ -1.44
TCRBV7S3A2A0A539 AC126615.2-201ENST00000553003 515 ntBASIC6.06□□□□□ -1.44
TCRBV7S3A2A0A539 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
TCRBV7S3A2A0A539 AC020915.3-201ENST00000595301 550 ntTSL 5 BASIC6.06□□□□□ -1.44
TCRBV7S3A2A0A539 AC012370.2-201ENST00000597541 1080 ntTSL 5 BASIC6.06□□□□□ -1.44
TCRBV7S3A2A0A539 AC084036.1-201ENST00000609190 508 ntBASIC6.06□□□□□ -1.44
TCRBV7S3A2A0A539 AL135999.3-201ENST00000610501 812 ntBASIC6.06□□□□□ -1.44
TCRBV7S3A2A0A539 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC6.06□□□□□ -1.44
TCRBV7S3A2A0A539 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC6.06□□□□□ -1.44
TCRBV7S3A2A0A539 OR12D2-207ENST00000642051 1496 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
TCRBV7S3A2A0A539 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
TCRBV7S3A2A0A539 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC6.06□□□□□ -1.44
TCRBV7S3A2A0A539 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC6.06□□□□□ -1.44
TCRBV7S3A2A0A539 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
TCRBV7S3A2A0A539 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC6.06□□□□□ -1.44
TCRBV7S3A2A0A539 SMAD5-211ENST00000545279 7012 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
TCRBV7S3A2A0A539 RBMY1HP-201ENST00000382759 1389 ntBASIC6.06□□□□□ -1.44
TCRBV7S3A2A0A539 SRGAP1-207ENST00000631006 8406 ntTSL 5 BASIC6.05□□□□□ -1.44
TCRBV7S3A2A0A539 THRB-203ENST00000396671 7506 ntAPPRIS P2 TSL 5 BASIC6.05□□□□□ -1.44
TCRBV7S3A2A0A539 AL669831.5-218ENST00000591702 1873 ntBASIC6.05□□□□□ -1.44
TCRBV7S3A2A0A539 MYO5A-209ENST00000553916 5989 ntTSL 5 BASIC6.05□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 97.5 ms