Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 AP000654.1-201ENST00000602510 1192 ntTSL 5 BASIC5.26□□□□□ -1.57
RHBDD3Q9Y3P4 AP001823.1-201ENST00000604056 1003 ntBASIC5.26□□□□□ -1.57
RHBDD3Q9Y3P4 AC015849.6-201ENST00000605454 474 ntBASIC5.26□□□□□ -1.57
RHBDD3Q9Y3P4 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC5.26□□□□□ -1.57
RHBDD3Q9Y3P4 OSTC-205ENST00000613215 876 ntTSL 2 BASIC5.26□□□□□ -1.57
RHBDD3Q9Y3P4 AC015819.1-201ENST00000613588 663 ntBASIC5.26□□□□□ -1.57
RHBDD3Q9Y3P4 MIR6813-201ENST00000621638 56 ntBASIC5.26□□□□□ -1.57
RHBDD3Q9Y3P4 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC5.26□□□□□ -1.57
RHBDD3Q9Y3P4 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
RHBDD3Q9Y3P4 OR4N5-202ENST00000641086 2187 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
RHBDD3Q9Y3P4 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
RHBDD3Q9Y3P4 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
RHBDD3Q9Y3P4 AP002004.1-203ENST00000531091 1768 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
RHBDD3Q9Y3P4 MLH1-206ENST00000435176 2428 ntTSL 2 BASIC5.26□□□□□ -1.57
RHBDD3Q9Y3P4 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC5.26□□□□□ -1.57
RHBDD3Q9Y3P4 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
RHBDD3Q9Y3P4 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
RHBDD3Q9Y3P4 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC5.26□□□□□ -1.57
RHBDD3Q9Y3P4 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
RHBDD3Q9Y3P4 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
RHBDD3Q9Y3P4 CBLB-205ENST00000407712 1493 ntTSL 2 BASIC5.26□□□□□ -1.57
RHBDD3Q9Y3P4 AC015799.1-201ENST00000622996 3122 ntBASIC5.26□□□□□ -1.57
RHBDD3Q9Y3P4 Z95114.1-201ENST00000624264 14574 ntBASIC5.25□□□□□ -1.57
RHBDD3Q9Y3P4 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
RHBDD3Q9Y3P4 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC5.25□□□□□ -1.57
RHBDD3Q9Y3P4 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
RHBDD3Q9Y3P4 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
RHBDD3Q9Y3P4 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
RHBDD3Q9Y3P4 LINC02010-202ENST00000471638 1829 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
RHBDD3Q9Y3P4 AL161756.3-201ENST00000641216 2071 ntBASIC5.25□□□□□ -1.57
RHBDD3Q9Y3P4 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
RHBDD3Q9Y3P4 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC5.25□□□□□ -1.57
RHBDD3Q9Y3P4 MTRNR2L3-201ENST00000543500 1539 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
RHBDD3Q9Y3P4 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
RHBDD3Q9Y3P4 OR4N2-201ENST00000315947 924 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
RHBDD3Q9Y3P4 TINAG-203ENST00000370869 782 ntTSL 3 BASIC5.25□□□□□ -1.57
RHBDD3Q9Y3P4 AC000095.2-201ENST00000424407 768 ntTSL 2 BASIC5.25□□□□□ -1.57
RHBDD3Q9Y3P4 DPYD-IT1-201ENST00000424982 401 ntTSL 3 BASIC5.25□□□□□ -1.57
RHBDD3Q9Y3P4 LCE6A-201ENST00000431011 628 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
RHBDD3Q9Y3P4 PSMD10P2-201ENST00000432890 672 ntBASIC5.25□□□□□ -1.57
RHBDD3Q9Y3P4 OR3D1P-201ENST00000438288 955 ntBASIC5.25□□□□□ -1.57
RHBDD3Q9Y3P4 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC5.25□□□□□ -1.57
RHBDD3Q9Y3P4 AC093719.1-201ENST00000480427 441 ntBASIC5.25□□□□□ -1.57
RHBDD3Q9Y3P4 RPL12P30-201ENST00000488389 499 ntBASIC5.25□□□□□ -1.57
RHBDD3Q9Y3P4 AC124893.1-201ENST00000496247 545 ntTSL 5 BASIC5.25□□□□□ -1.57
RHBDD3Q9Y3P4 ST13P12-201ENST00000508958 1094 ntBASIC5.25□□□□□ -1.57
RHBDD3Q9Y3P4 LINC02196-201ENST00000512838 568 ntTSL 4 BASIC5.25□□□□□ -1.57
RHBDD3Q9Y3P4 KCTD9P6-201ENST00000522306 950 ntBASIC5.25□□□□□ -1.57
RHBDD3Q9Y3P4 NPIPB14P-203ENST00000532298 987 ntBASIC5.25□□□□□ -1.57
RHBDD3Q9Y3P4 BTG1P1-201ENST00000540396 508 ntBASIC5.25□□□□□ -1.57
RHBDD3Q9Y3P4 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
RHBDD3Q9Y3P4 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
RHBDD3Q9Y3P4 BMS1P16-201ENST00000556075 1147 ntBASIC5.25□□□□□ -1.57
RHBDD3Q9Y3P4 MT1CP-201ENST00000567054 174 ntBASIC5.25□□□□□ -1.57
RHBDD3Q9Y3P4 AC025857.2-201ENST00000602711 238 ntBASIC5.25□□□□□ -1.57
RHBDD3Q9Y3P4 AC091769.2-201ENST00000605385 479 ntTSL 4 BASIC5.25□□□□□ -1.57
RHBDD3Q9Y3P4 HTR1DP1-201ENST00000616500 888 ntBASIC5.25□□□□□ -1.57
RHBDD3Q9Y3P4 REV3L-214ENST00000619481 969 ntTSL 5 BASIC5.25□□□□□ -1.57
RHBDD3Q9Y3P4 AL512356.3-201ENST00000623005 461 ntBASIC5.25□□□□□ -1.57
RHBDD3Q9Y3P4 PSMD10P2-203ENST00000627340 914 ntTSL 5 BASIC5.25□□□□□ -1.57
RHBDD3Q9Y3P4 LINC01435-220ENST00000630847 714 ntTSL 5 BASIC5.25□□□□□ -1.57
RHBDD3Q9Y3P4 AC000095.2-202ENST00000637415 154 ntBASIC5.25□□□□□ -1.57
RHBDD3Q9Y3P4 5S_rRNA.29-201ENST00000641250 107 ntBASIC5.25□□□□□ -1.57
RHBDD3Q9Y3P4 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC5.25□□□□□ -1.57
RHBDD3Q9Y3P4 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
RHBDD3Q9Y3P4 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
RHBDD3Q9Y3P4 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
RHBDD3Q9Y3P4 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
RHBDD3Q9Y3P4 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC5.25□□□□□ -1.57
RHBDD3Q9Y3P4 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
RHBDD3Q9Y3P4 AC008163.1-201ENST00000636281 1455 ntTSL 5 BASIC5.25□□□□□ -1.57
RHBDD3Q9Y3P4 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
RHBDD3Q9Y3P4 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
RHBDD3Q9Y3P4 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC5.25□□□□□ -1.57
RHBDD3Q9Y3P4 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
RHBDD3Q9Y3P4 FHL5-201ENST00000326771 2031 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
RHBDD3Q9Y3P4 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
RHBDD3Q9Y3P4 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
RHBDD3Q9Y3P4 H3F3A-201ENST00000366813 1308 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
RHBDD3Q9Y3P4 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC5.24□□□□□ -1.57
RHBDD3Q9Y3P4 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC5.24□□□□□ -1.57
RHBDD3Q9Y3P4 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
RHBDD3Q9Y3P4 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
RHBDD3Q9Y3P4 WDR95P-201ENST00000425638 1542 ntBASIC5.24□□□□□ -1.57
RHBDD3Q9Y3P4 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC5.24□□□□□ -1.57
RHBDD3Q9Y3P4 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
RHBDD3Q9Y3P4 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
RHBDD3Q9Y3P4 LINC02086-202ENST00000492522 2091 ntTSL 5 BASIC5.24□□□□□ -1.57
RHBDD3Q9Y3P4 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
RHBDD3Q9Y3P4 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC5.24□□□□□ -1.57
RHBDD3Q9Y3P4 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
RHBDD3Q9Y3P4 IFNA10-201ENST00000357374 963 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
RHBDD3Q9Y3P4 U3.10-201ENST00000364459 214 ntBASIC5.24□□□□□ -1.57
RHBDD3Q9Y3P4 MIR188-201ENST00000385034 86 ntBASIC5.24□□□□□ -1.57
RHBDD3Q9Y3P4 SULT1C2-204ENST00000409880 1206 ntTSL 3 BASIC5.24□□□□□ -1.57
RHBDD3Q9Y3P4 RNA5SP156-201ENST00000410250 110 ntBASIC5.24□□□□□ -1.57
RHBDD3Q9Y3P4 AL160163.1-201ENST00000417465 403 ntTSL 3 BASIC5.24□□□□□ -1.57
RHBDD3Q9Y3P4 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC5.24□□□□□ -1.57
RHBDD3Q9Y3P4 AL590004.3-202ENST00000445883 451 ntBASIC5.24□□□□□ -1.57
RHBDD3Q9Y3P4 RPL23AP60-201ENST00000450011 454 ntBASIC5.24□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 157.5 ms