Protein–RNA interactions for Protein: Q9UNS2

COPS3, COP9 signalosome complex subunit 3, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3Q9UNS2 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
COPS3Q9UNS2 LINC01484-201ENST00000517733 555 ntTSL 4 BASIC5.32□□□□□ -1.56
COPS3Q9UNS2 IGKV1OR22-1-201ENST00000521497 360 ntBASIC5.32□□□□□ -1.56
COPS3Q9UNS2 AC104248.1-201ENST00000522244 481 ntTSL 3 BASIC5.32□□□□□ -1.56
COPS3Q9UNS2 ASB8-203ENST00000535988 679 ntTSL 2 BASIC5.32□□□□□ -1.56
COPS3Q9UNS2 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC5.32□□□□□ -1.56
COPS3Q9UNS2 TDGP1-201ENST00000543961 1229 ntBASIC5.32□□□□□ -1.56
COPS3Q9UNS2 AC022523.1-201ENST00000560360 364 ntTSL 5 BASIC5.32□□□□□ -1.56
COPS3Q9UNS2 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC5.32□□□□□ -1.56
COPS3Q9UNS2 AC009121.2-202ENST00000572706 505 ntTSL 3 BASIC5.32□□□□□ -1.56
COPS3Q9UNS2 AC104984.1-201ENST00000581633 697 ntTSL 3 BASIC5.32□□□□□ -1.56
COPS3Q9UNS2 AC012593.1-208ENST00000587791 696 ntTSL 5 BASIC5.32□□□□□ -1.56
COPS3Q9UNS2 AC107993.1-201ENST00000591343 684 ntBASIC5.32□□□□□ -1.56
COPS3Q9UNS2 AC092067.1-201ENST00000592929 488 ntTSL 3 BASIC5.32□□□□□ -1.56
COPS3Q9UNS2 GAPDHP41-201ENST00000613707 975 ntBASIC5.32□□□□□ -1.56
COPS3Q9UNS2 AP003072.5-201ENST00000623872 773 ntBASIC5.32□□□□□ -1.56
COPS3Q9UNS2 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
COPS3Q9UNS2 AL596218.1-201ENST00000634239 1140 ntTSL 5 BASIC5.32□□□□□ -1.56
COPS3Q9UNS2 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC5.32□□□□□ -1.56
COPS3Q9UNS2 AC141930.3-201ENST00000640435 762 ntTSL 5 BASIC5.32□□□□□ -1.56
COPS3Q9UNS2 LINC02008-201ENST00000470263 1951 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
COPS3Q9UNS2 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
COPS3Q9UNS2 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC5.32□□□□□ -1.56
COPS3Q9UNS2 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
COPS3Q9UNS2 AC120036.2-201ENST00000509729 1474 ntBASIC5.32□□□□□ -1.56
COPS3Q9UNS2 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
COPS3Q9UNS2 ING3-204ENST00000431467 1447 ntTSL 2 BASIC5.31□□□□□ -1.56
COPS3Q9UNS2 THAP12P9-201ENST00000503971 2360 ntBASIC5.31□□□□□ -1.56
COPS3Q9UNS2 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC5.31□□□□□ -1.56
COPS3Q9UNS2 RPL17-C18orf32-203ENST00000584895 1440 ntAPPRIS P1 TSL 3 BASIC5.31□□□□□ -1.56
COPS3Q9UNS2 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
COPS3Q9UNS2 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
COPS3Q9UNS2 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
COPS3Q9UNS2 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC5.31□□□□□ -1.56
COPS3Q9UNS2 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC5.31□□□□□ -1.56
COPS3Q9UNS2 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
COPS3Q9UNS2 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC5.31□□□□□ -1.56
COPS3Q9UNS2 FPGT-TNNI3K-201ENST00000370893 1195 ntTSL 2 BASIC5.31□□□□□ -1.56
COPS3Q9UNS2 NUDT5-203ENST00000378940 1126 ntTSL 5 BASIC5.31□□□□□ -1.56
COPS3Q9UNS2 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
COPS3Q9UNS2 MYL6P5-201ENST00000412707 459 ntBASIC5.31□□□□□ -1.56
COPS3Q9UNS2 AP006748.1-201ENST00000418874 346 ntTSL 3 BASIC5.31□□□□□ -1.56
COPS3Q9UNS2 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC5.31□□□□□ -1.56
COPS3Q9UNS2 AC007966.1-201ENST00000421998 1179 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
COPS3Q9UNS2 LINC01762-201ENST00000423907 454 ntTSL 5 BASIC5.31□□□□□ -1.56
COPS3Q9UNS2 ZNF880-203ENST00000424032 558 ntTSL 4 BASIC5.31□□□□□ -1.56
COPS3Q9UNS2 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC5.31□□□□□ -1.56
COPS3Q9UNS2 BX276092.6-201ENST00000430476 250 ntBASIC5.31□□□□□ -1.56
COPS3Q9UNS2 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC5.31□□□□□ -1.56
COPS3Q9UNS2 AC016582.1-203ENST00000433142 502 ntTSL 3 BASIC5.31□□□□□ -1.56
COPS3Q9UNS2 PSMD8P1-201ENST00000436275 769 ntBASIC5.31□□□□□ -1.56
COPS3Q9UNS2 AL136460.1-201ENST00000442389 473 ntTSL 3 BASIC5.31□□□□□ -1.56
COPS3Q9UNS2 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC5.31□□□□□ -1.56
COPS3Q9UNS2 WDR82P2-201ENST00000444540 928 ntBASIC5.31□□□□□ -1.56
COPS3Q9UNS2 ZNF619P1-201ENST00000446539 752 ntBASIC5.31□□□□□ -1.56
COPS3Q9UNS2 RPS18P1-201ENST00000447840 458 ntBASIC5.31□□□□□ -1.56
COPS3Q9UNS2 AL356309.2-201ENST00000454034 719 ntTSL 5 BASIC5.31□□□□□ -1.56
COPS3Q9UNS2 BX276092.8-201ENST00000455722 250 ntBASIC5.31□□□□□ -1.56
COPS3Q9UNS2 CT45A5-201ENST00000487941 1161 ntAPPRIS P1 TSL 2 BASIC5.31□□□□□ -1.56
COPS3Q9UNS2 MOSPD2-206ENST00000497603 775 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
COPS3Q9UNS2 AC010445.1-201ENST00000507674 440 ntTSL 5 BASIC5.31□□□□□ -1.56
COPS3Q9UNS2 RNU2-45P-201ENST00000516068 187 ntBASIC5.31□□□□□ -1.56
COPS3Q9UNS2 COX6C-205ENST00000520468 1098 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
COPS3Q9UNS2 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC5.31□□□□□ -1.56
COPS3Q9UNS2 AC090283.1-201ENST00000582101 265 ntTSL 3 BASIC5.31□□□□□ -1.56
COPS3Q9UNS2 AC025809.1-201ENST00000585336 560 ntTSL 4 BASIC5.31□□□□□ -1.56
COPS3Q9UNS2 MIR212-201ENST00000586026 110 ntBASIC5.31□□□□□ -1.56
COPS3Q9UNS2 AP001823.1-201ENST00000604056 1003 ntBASIC5.31□□□□□ -1.56
COPS3Q9UNS2 LINC02112-203ENST00000606169 419 ntTSL 5 BASIC5.31□□□□□ -1.56
COPS3Q9UNS2 AL137246.1-201ENST00000607072 977 ntBASIC5.31□□□□□ -1.56
COPS3Q9UNS2 AL161457.2-204ENST00000609241 869 ntTSL 5 BASIC5.31□□□□□ -1.56
COPS3Q9UNS2 CKLF-CMTM1-206ENST00000616804 678 ntAPPRIS ALT2 TSL 2 BASIC5.31□□□□□ -1.56
COPS3Q9UNS2 AL122023.1-201ENST00000622847 530 ntBASIC5.31□□□□□ -1.56
COPS3Q9UNS2 AF067845.4-201ENST00000633198 480 ntTSL 3 BASIC5.31□□□□□ -1.56
COPS3Q9UNS2 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
COPS3Q9UNS2 AC027279.4-201ENST00000624371 2072 ntBASIC5.31□□□□□ -1.56
COPS3Q9UNS2 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
COPS3Q9UNS2 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC5.31□□□□□ -1.56
COPS3Q9UNS2 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
COPS3Q9UNS2 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
COPS3Q9UNS2 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC5.31□□□□□ -1.56
COPS3Q9UNS2 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
COPS3Q9UNS2 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
COPS3Q9UNS2 AC018809.2-201ENST00000602436 3823 ntBASIC5.3□□□□□ -1.56
COPS3Q9UNS2 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
COPS3Q9UNS2 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
COPS3Q9UNS2 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
COPS3Q9UNS2 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
COPS3Q9UNS2 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
COPS3Q9UNS2 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
COPS3Q9UNS2 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
COPS3Q9UNS2 AC020656.2-201ENST00000613291 5309 ntBASIC5.3□□□□□ -1.56
COPS3Q9UNS2 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
COPS3Q9UNS2 AMN1-208ENST00000537562 1538 ntTSL 5 BASIC5.3□□□□□ -1.56
COPS3Q9UNS2 AC126755.2-201ENST00000545114 1522 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
COPS3Q9UNS2 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC5.3□□□□□ -1.56
COPS3Q9UNS2 OR4N2-201ENST00000315947 924 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
COPS3Q9UNS2 XAGE5-201ENST00000351072 478 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
COPS3Q9UNS2 RN7SKP128-201ENST00000364270 303 ntBASIC5.3□□□□□ -1.56
COPS3Q9UNS2 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC5.3□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 74.6 ms