Protein–RNA interactions for Protein: Q9NP66

HMG20A, High mobility group protein 20A, humanhuman

Predictions only

Length 347 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20AQ9NP66 ENPP7P11-201ENST00000505915 627 ntBASIC5.34□□□□□ -1.55
HMG20AQ9NP66 AC004063.1-201ENST00000508358 547 ntTSL 4 BASIC5.34□□□□□ -1.55
HMG20AQ9NP66 AC093325.1-201ENST00000508378 326 ntBASIC5.34□□□□□ -1.55
HMG20AQ9NP66 AC093664.1-201ENST00000511779 289 ntBASIC5.34□□□□□ -1.55
HMG20AQ9NP66 RNU6ATAC39P-201ENST00000516309 149 ntBASIC5.34□□□□□ -1.55
HMG20AQ9NP66 TPT1-AS1-207ENST00000520310 563 ntTSL 5 BASIC5.34□□□□□ -1.55
HMG20AQ9NP66 AC099805.1-205ENST00000521794 837 ntTSL 2 BASIC5.34□□□□□ -1.55
HMG20AQ9NP66 AC022509.1-202ENST00000537525 494 ntTSL 4 BASIC5.34□□□□□ -1.55
HMG20AQ9NP66 AC079793.1-201ENST00000553076 713 ntTSL 4 BASIC5.34□□□□□ -1.55
HMG20AQ9NP66 MIR9-3HG-211ENST00000561037 779 ntTSL 5 BASIC5.34□□□□□ -1.55
HMG20AQ9NP66 AC027796.1-201ENST00000575593 512 ntBASIC5.34□□□□□ -1.55
HMG20AQ9NP66 AL589863.1-201ENST00000595383 631 ntBASIC5.34□□□□□ -1.55
HMG20AQ9NP66 AL513327.3-201ENST00000602618 469 ntBASIC5.34□□□□□ -1.55
HMG20AQ9NP66 IGKV2OR2-7D-201ENST00000603664 304 ntBASIC5.34□□□□□ -1.55
HMG20AQ9NP66 IGKV2OR2-7-201ENST00000604652 304 ntBASIC5.34□□□□□ -1.55
HMG20AQ9NP66 MIR6883-201ENST00000614952 78 ntBASIC5.34□□□□□ -1.55
HMG20AQ9NP66 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
HMG20AQ9NP66 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC5.34□□□□□ -1.55
HMG20AQ9NP66 AC011755.1-201ENST00000623763 2049 ntBASIC5.34□□□□□ -1.55
HMG20AQ9NP66 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC5.34□□□□□ -1.55
HMG20AQ9NP66 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC5.34□□□□□ -1.55
HMG20AQ9NP66 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC5.34□□□□□ -1.55
HMG20AQ9NP66 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
HMG20AQ9NP66 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
HMG20AQ9NP66 TMEM267-201ENST00000397080 2338 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
HMG20AQ9NP66 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
HMG20AQ9NP66 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC5.34□□□□□ -1.56
HMG20AQ9NP66 CENPN-203ENST00000393335 1556 ntTSL 2 BASIC5.33□□□□□ -1.56
HMG20AQ9NP66 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
HMG20AQ9NP66 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC5.33□□□□□ -1.56
HMG20AQ9NP66 PMCHL2-202ENST00000450213 1917 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
HMG20AQ9NP66 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC5.33□□□□□ -1.56
HMG20AQ9NP66 HHLA3-201ENST00000359875 898 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
HMG20AQ9NP66 SPP1-202ENST00000360804 1196 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
HMG20AQ9NP66 MIR188-201ENST00000385034 86 ntBASIC5.33□□□□□ -1.56
HMG20AQ9NP66 AL033519.1-201ENST00000407266 307 ntBASIC5.33□□□□□ -1.56
HMG20AQ9NP66 PLGLB1-202ENST00000409310 960 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
HMG20AQ9NP66 SULT1C2-204ENST00000409880 1206 ntTSL 3 BASIC5.33□□□□□ -1.56
HMG20AQ9NP66 NUTM2A-AS1-203ENST00000413961 501 ntTSL 3 BASIC5.33□□□□□ -1.56
HMG20AQ9NP66 SLC8A1-AS1-202ENST00000417875 344 ntTSL 2 BASIC5.33□□□□□ -1.56
HMG20AQ9NP66 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC5.33□□□□□ -1.56
HMG20AQ9NP66 FBXW12-203ENST00000436231 1117 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
HMG20AQ9NP66 AL355390.2-201ENST00000446691 880 ntTSL 5 BASIC5.33□□□□□ -1.56
HMG20AQ9NP66 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC5.33□□□□□ -1.56
HMG20AQ9NP66 RN7SL643P-201ENST00000471845 291 ntBASIC5.33□□□□□ -1.56
HMG20AQ9NP66 AP003385.3-201ENST00000472498 287 ntBASIC5.33□□□□□ -1.56
HMG20AQ9NP66 TFDP2-211ENST00000479040 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
HMG20AQ9NP66 RAB7A-205ENST00000485280 507 ntTSL 3 BASIC5.33□□□□□ -1.56
HMG20AQ9NP66 AC105389.1-201ENST00000510602 561 ntTSL 4 BASIC5.33□□□□□ -1.56
HMG20AQ9NP66 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC5.33□□□□□ -1.56
HMG20AQ9NP66 AC011396.2-201ENST00000515598 582 ntTSL 3 BASIC5.33□□□□□ -1.56
HMG20AQ9NP66 IGHV4-55-201ENST00000520889 368 ntBASIC5.33□□□□□ -1.56
HMG20AQ9NP66 AC131935.1-201ENST00000524621 333 ntBASIC5.33□□□□□ -1.56
HMG20AQ9NP66 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC5.33□□□□□ -1.56
HMG20AQ9NP66 TMEM106C-215ENST00000550552 776 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
HMG20AQ9NP66 AC078778.2-201ENST00000553061 567 ntTSL 5 BASIC5.33□□□□□ -1.56
HMG20AQ9NP66 MIR4472-2-201ENST00000582069 67 ntBASIC5.33□□□□□ -1.56
HMG20AQ9NP66 RN7SL475P-201ENST00000583379 298 ntBASIC5.33□□□□□ -1.56
HMG20AQ9NP66 AC005332.4-201ENST00000592752 579 ntBASIC5.33□□□□□ -1.56
HMG20AQ9NP66 OR7A8P-201ENST00000595427 913 ntBASIC5.33□□□□□ -1.56
HMG20AQ9NP66 DYNLL1P1-201ENST00000595442 269 ntBASIC5.33□□□□□ -1.56
HMG20AQ9NP66 AC010326.3-201ENST00000597780 679 ntTSL 5 BASIC5.33□□□□□ -1.56
HMG20AQ9NP66 NDUFB9P1-201ENST00000604683 510 ntBASIC5.33□□□□□ -1.56
HMG20AQ9NP66 U91328.4-201ENST00000608919 517 ntBASIC5.33□□□□□ -1.56
HMG20AQ9NP66 AL008582.1-201ENST00000609612 442 ntBASIC5.33□□□□□ -1.56
HMG20AQ9NP66 AC241377.1-201ENST00000619797 406 ntBASIC5.33□□□□□ -1.56
HMG20AQ9NP66 AL137067.2-201ENST00000621202 131 ntBASIC5.33□□□□□ -1.56
HMG20AQ9NP66 MIR6503-201ENST00000622884 86 ntBASIC5.33□□□□□ -1.56
HMG20AQ9NP66 AC068213.1-201ENST00000625124 226 ntBASIC5.33□□□□□ -1.56
HMG20AQ9NP66 CLUHP10-201ENST00000631979 980 ntBASIC5.33□□□□□ -1.56
HMG20AQ9NP66 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC5.33□□□□□ -1.56
HMG20AQ9NP66 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC5.32□□□□□ -1.56
HMG20AQ9NP66 OFD1P8Y-201ENST00000449148 1433 ntBASIC5.32□□□□□ -1.56
HMG20AQ9NP66 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC5.32□□□□□ -1.56
HMG20AQ9NP66 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
HMG20AQ9NP66 SMG1P4-204ENST00000523028 4131 ntBASIC5.32□□□□□ -1.56
HMG20AQ9NP66 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
HMG20AQ9NP66 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC5.32□□□□□ -1.56
HMG20AQ9NP66 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
HMG20AQ9NP66 LTA4H-209ENST00000552789 2025 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
HMG20AQ9NP66 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
HMG20AQ9NP66 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
HMG20AQ9NP66 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
HMG20AQ9NP66 RN7SKP74-201ENST00000362849 309 ntBASIC5.32□□□□□ -1.56
HMG20AQ9NP66 RN7SKP257-201ENST00000364525 309 ntBASIC5.32□□□□□ -1.56
HMG20AQ9NP66 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
HMG20AQ9NP66 SNORD94-201ENST00000386037 137 ntBASIC5.32□□□□□ -1.56
HMG20AQ9NP66 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC5.32□□□□□ -1.56
HMG20AQ9NP66 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC5.32□□□□□ -1.56
HMG20AQ9NP66 CRYZL1-217ENST00000445393 824 ntTSL 5 BASIC5.32□□□□□ -1.56
HMG20AQ9NP66 AC009518.1-201ENST00000452219 559 ntTSL 4 BASIC5.32□□□□□ -1.56
HMG20AQ9NP66 AL034369.1-201ENST00000453808 477 ntBASIC5.32□□□□□ -1.56
HMG20AQ9NP66 L29074.1-201ENST00000456072 534 ntTSL 5 BASIC5.32□□□□□ -1.56
HMG20AQ9NP66 MTCO1P55-201ENST00000489829 745 ntBASIC5.32□□□□□ -1.56
HMG20AQ9NP66 AC018639.1-201ENST00000492994 442 ntBASIC5.32□□□□□ -1.56
HMG20AQ9NP66 CCDC11P1-201ENST00000503137 1162 ntBASIC5.32□□□□□ -1.56
HMG20AQ9NP66 AC114324.2-202ENST00000503812 134 ntBASIC5.32□□□□□ -1.56
HMG20AQ9NP66 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC5.32□□□□□ -1.56
HMG20AQ9NP66 AC108159.1-201ENST00000505408 489 ntTSL 3 BASIC5.32□□□□□ -1.56
HMG20AQ9NP66 GAPDHP62-201ENST00000515313 990 ntBASIC5.32□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 112.2 ms