Protein–RNA interactions for Protein: Q9HD45

TM9SF3, Transmembrane 9 superfamily member 3, humanhuman

Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3Q9HD45 AL590399.3-202ENST00000448491 495 ntTSL 5 BASIC6.12□□□□□ -1.43
TM9SF3Q9HD45 DDX18P6-201ENST00000450119 1997 ntBASIC6.12□□□□□ -1.43
TM9SF3Q9HD45 VN1R38P-201ENST00000450265 887 ntBASIC6.12□□□□□ -1.43
TM9SF3Q9HD45 VPS25P1-201ENST00000455691 508 ntBASIC6.12□□□□□ -1.43
TM9SF3Q9HD45 RANP2-201ENST00000456833 229 ntBASIC6.12□□□□□ -1.43
TM9SF3Q9HD45 RNF19BPY-201ENST00000458209 1550 ntBASIC6.12□□□□□ -1.43
TM9SF3Q9HD45 B4GALT4-AS1-201ENST00000470790 544 ntTSL 5 BASIC6.12□□□□□ -1.43
TM9SF3Q9HD45 LINC01214-201ENST00000471222 335 ntTSL 5 BASIC6.12□□□□□ -1.43
TM9SF3Q9HD45 PROS2P-201ENST00000474651 1951 ntBASIC6.12□□□□□ -1.43
TM9SF3Q9HD45 RN7SL273P-201ENST00000481561 299 ntBASIC6.12□□□□□ -1.43
TM9SF3Q9HD45 AC117386.2-203ENST00000489690 557 ntTSL 3 BASIC6.12□□□□□ -1.43
TM9SF3Q9HD45 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
TM9SF3Q9HD45 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC6.12□□□□□ -1.43
TM9SF3Q9HD45 BICD1-206ENST00000551086 423 ntTSL 3 BASIC6.12□□□□□ -1.43
TM9SF3Q9HD45 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC6.12□□□□□ -1.43
TM9SF3Q9HD45 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC6.12□□□□□ -1.43
TM9SF3Q9HD45 STARD6-202ENST00000577499 696 ntTSL 2 BASIC6.12□□□□□ -1.43
TM9SF3Q9HD45 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC6.12□□□□□ -1.43
TM9SF3Q9HD45 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC6.12□□□□□ -1.43
TM9SF3Q9HD45 NPIPB1P-202ENST00000588786 828 ntBASIC6.12□□□□□ -1.43
TM9SF3Q9HD45 MIR6768-201ENST00000610734 72 ntBASIC6.12□□□□□ -1.43
TM9SF3Q9HD45 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC6.12□□□□□ -1.43
TM9SF3Q9HD45 AL136228.1-201ENST00000622221 319 ntBASIC6.12□□□□□ -1.43
TM9SF3Q9HD45 AC011369.2-201ENST00000624423 1567 ntBASIC6.12□□□□□ -1.43
TM9SF3Q9HD45 AL139220.2-221ENST00000628123 395 ntTSL 5 BASIC6.12□□□□□ -1.43
TM9SF3Q9HD45 AP002008.2-205ENST00000637111 1091 ntTSL 5 BASIC6.12□□□□□ -1.43
TM9SF3Q9HD45 5S_rRNA.28-201ENST00000638107 119 ntBASIC6.12□□□□□ -1.43
TM9SF3Q9HD45 MBNL2-202ENST00000345429 4669 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
TM9SF3Q9HD45 LINC01415-201ENST00000587320 4071 ntTSL 2 BASIC6.12□□□□□ -1.43
TM9SF3Q9HD45 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
TM9SF3Q9HD45 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC6.12□□□□□ -1.43
TM9SF3Q9HD45 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
TM9SF3Q9HD45 SLC1A2-202ENST00000395750 11538 ntAPPRIS ALT1 TSL 1 (best) BASIC6.11□□□□□ -1.43
TM9SF3Q9HD45 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC6.11□□□□□ -1.43
TM9SF3Q9HD45 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
TM9SF3Q9HD45 AC011815.2-201ENST00000618230 2021 ntBASIC6.11□□□□□ -1.43
TM9SF3Q9HD45 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC6.11□□□□□ -1.43
TM9SF3Q9HD45 RAD54B-201ENST00000297592 1879 ntTSL 2 BASIC6.11□□□□□ -1.43
TM9SF3Q9HD45 SNW1-205ENST00000555761 1855 ntTSL 2 BASIC6.11□□□□□ -1.43
TM9SF3Q9HD45 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC6.11□□□□□ -1.43
TM9SF3Q9HD45 AC011416.1-201ENST00000514947 1732 ntBASIC6.11□□□□□ -1.43
TM9SF3Q9HD45 AF287957.1-201ENST00000607368 1595 ntBASIC6.11□□□□□ -1.43
TM9SF3Q9HD45 CRP-204ENST00000368112 787 ntTSL 2 BASIC6.11□□□□□ -1.43
TM9SF3Q9HD45 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC6.11□□□□□ -1.43
TM9SF3Q9HD45 NDUFS5P5-201ENST00000437256 321 ntBASIC6.11□□□□□ -1.43
TM9SF3Q9HD45 LINC02096-201ENST00000445035 953 ntTSL 5 BASIC6.11□□□□□ -1.43
TM9SF3Q9HD45 UBFD1P1-201ENST00000473259 814 ntBASIC6.11□□□□□ -1.43
TM9SF3Q9HD45 AC027544.3-201ENST00000535082 757 ntBASIC6.11□□□□□ -1.43
TM9SF3Q9HD45 MAGOHB-204ENST00000539554 666 ntTSL 3 BASIC6.11□□□□□ -1.43
TM9SF3Q9HD45 LINC00871-204ENST00000556886 866 ntTSL 3 BASIC6.11□□□□□ -1.43
TM9SF3Q9HD45 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC6.11□□□□□ -1.43
TM9SF3Q9HD45 MRO-208ENST00000588444 866 ntTSL 3 BASIC6.11□□□□□ -1.43
TM9SF3Q9HD45 LINC01198-204ENST00000594153 552 ntTSL 3 BASIC6.11□□□□□ -1.43
TM9SF3Q9HD45 AC006924.1-201ENST00000610750 559 ntBASIC6.11□□□□□ -1.43
TM9SF3Q9HD45 MIR6793-201ENST00000612376 63 ntBASIC6.11□□□□□ -1.43
TM9SF3Q9HD45 AC084816.1-204ENST00000628326 631 ntTSL 5 BASIC6.11□□□□□ -1.43
TM9SF3Q9HD45 AC012564.1-201ENST00000636802 557 ntTSL 4 BASIC6.11□□□□□ -1.43
TM9SF3Q9HD45 AL357060.1-201ENST00000638039 977 ntTSL 5 BASIC6.11□□□□□ -1.43
TM9SF3Q9HD45 THAP6-201ENST00000311638 3549 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
TM9SF3Q9HD45 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
TM9SF3Q9HD45 MYBL1-206ENST00000524176 2148 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
TM9SF3Q9HD45 ZNF607-202ENST00000395835 4003 ntAPPRIS ALT2 TSL 2 BASIC6.11□□□□□ -1.43
TM9SF3Q9HD45 AHNAK2-201ENST00000333244 18254 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
TM9SF3Q9HD45 PTPN3-202ENST00000374541 6703 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
TM9SF3Q9HD45 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
TM9SF3Q9HD45 DAZ2-204ENST00000382431 3637 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
TM9SF3Q9HD45 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC6.11□□□□□ -1.43
TM9SF3Q9HD45 TMEM200A-202ENST00000392429 5017 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
TM9SF3Q9HD45 ARHGEF9-229ENST00000637040 5001 ntTSL 5 BASIC6.1□□□□□ -1.43
TM9SF3Q9HD45 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
TM9SF3Q9HD45 SOS1-201ENST00000395038 4123 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
TM9SF3Q9HD45 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC6.1□□□□□ -1.43
TM9SF3Q9HD45 MEPE-209ENST00000560249 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
TM9SF3Q9HD45 FSCB-201ENST00000340446 2938 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
TM9SF3Q9HD45 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
TM9SF3Q9HD45 C16orf87-202ENST00000394806 6640 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
TM9SF3Q9HD45 ZNF329-201ENST00000358067 3290 ntAPPRIS P1 TSL 2 BASIC6.1□□□□□ -1.43
TM9SF3Q9HD45 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC6.1□□□□□ -1.43
TM9SF3Q9HD45 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC6.1□□□□□ -1.43
TM9SF3Q9HD45 LDHC-201ENST00000280704 1256 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
TM9SF3Q9HD45 RN7SKP292-201ENST00000365522 317 ntBASIC6.1□□□□□ -1.43
TM9SF3Q9HD45 EEF1B2P8-201ENST00000414101 671 ntBASIC6.1□□□□□ -1.43
TM9SF3Q9HD45 HNRNPA1P18-201ENST00000433537 927 ntBASIC6.1□□□□□ -1.43
TM9SF3Q9HD45 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC6.1□□□□□ -1.43
TM9SF3Q9HD45 TRIM60P16-201ENST00000444048 694 ntBASIC6.1□□□□□ -1.43
TM9SF3Q9HD45 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC6.1□□□□□ -1.43
TM9SF3Q9HD45 AP006222.1-205ENST00000450734 457 ntBASIC6.1□□□□□ -1.43
TM9SF3Q9HD45 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC6.1□□□□□ -1.43
TM9SF3Q9HD45 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC6.1□□□□□ -1.43
TM9SF3Q9HD45 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
TM9SF3Q9HD45 AP001972.1-201ENST00000529215 506 ntTSL 2 BASIC6.1□□□□□ -1.43
TM9SF3Q9HD45 AP000851.1-202ENST00000542119 743 ntTSL 3 BASIC6.1□□□□□ -1.43
TM9SF3Q9HD45 AC092865.1-201ENST00000544395 1023 ntBASIC6.1□□□□□ -1.43
TM9SF3Q9HD45 LINC02451-201ENST00000546982 565 ntTSL 4 BASIC6.1□□□□□ -1.43
TM9SF3Q9HD45 AL121579.2-201ENST00000555466 590 ntBASIC6.1□□□□□ -1.43
TM9SF3Q9HD45 AC020978.7-201ENST00000575953 1187 ntBASIC6.1□□□□□ -1.43
TM9SF3Q9HD45 AC005244.1-201ENST00000582566 339 ntBASIC6.1□□□□□ -1.43
TM9SF3Q9HD45 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC6.1□□□□□ -1.43
TM9SF3Q9HD45 MIR6809-201ENST00000612189 116 ntBASIC6.1□□□□□ -1.43
TM9SF3Q9HD45 AC079298.3-203ENST00000623269 555 ntTSL 3 BASIC6.1□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms