Protein–RNA interactions for Protein: Q9H4D5

NXF3, Nuclear RNA export factor 3, humanhuman

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3Q9H4D5 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC6.38□□□□□ -1.39
NXF3Q9H4D5 AC023632.6-201ENST00000624338 2177 ntBASIC6.38□□□□□ -1.39
NXF3Q9H4D5 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
NXF3Q9H4D5 SLC2A14-203ENST00000431042 3458 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
NXF3Q9H4D5 AC005480.1-202ENST00000555916 3548 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
NXF3Q9H4D5 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC6.38□□□□□ -1.39
NXF3Q9H4D5 AC099506.1-201ENST00000567359 4037 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
NXF3Q9H4D5 AL158064.2-205ENST00000640346 4082 ntTSL 5 BASIC6.38□□□□□ -1.39
NXF3Q9H4D5 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
NXF3Q9H4D5 PLD1-202ENST00000351298 5604 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
NXF3Q9H4D5 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC6.37□□□□□ -1.39
NXF3Q9H4D5 AC113146.2-201ENST00000560743 1961 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
NXF3Q9H4D5 SRGAP1-207ENST00000631006 8406 ntTSL 5 BASIC6.37□□□□□ -1.39
NXF3Q9H4D5 MPP5-204ENST00000555925 5006 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
NXF3Q9H4D5 AL355377.1-201ENST00000621125 1653 ntBASIC6.37□□□□□ -1.39
NXF3Q9H4D5 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
NXF3Q9H4D5 PDGFRA-201ENST00000257290 6576 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
NXF3Q9H4D5 MIR323A-201ENST00000362199 86 ntBASIC6.37□□□□□ -1.39
NXF3Q9H4D5 RNA5SP394-201ENST00000364216 119 ntBASIC6.37□□□□□ -1.39
NXF3Q9H4D5 AC079355.1-201ENST00000421770 223 ntBASIC6.37□□□□□ -1.39
NXF3Q9H4D5 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC6.37□□□□□ -1.39
NXF3Q9H4D5 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
NXF3Q9H4D5 AL354793.1-201ENST00000446028 713 ntTSL 3 BASIC6.37□□□□□ -1.39
NXF3Q9H4D5 YWHAEP1-201ENST00000453697 763 ntBASIC6.37□□□□□ -1.39
NXF3Q9H4D5 RPL17P2-201ENST00000491913 451 ntBASIC6.37□□□□□ -1.39
NXF3Q9H4D5 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC6.37□□□□□ -1.39
NXF3Q9H4D5 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC6.37□□□□□ -1.39
NXF3Q9H4D5 OR4A42P-201ENST00000531397 938 ntBASIC6.37□□□□□ -1.39
NXF3Q9H4D5 VEPH1-219ENST00000537559 992 ntTSL 5 BASIC6.37□□□□□ -1.39
NXF3Q9H4D5 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC6.37□□□□□ -1.39
NXF3Q9H4D5 LINC02310-201ENST00000556762 572 ntTSL 4 BASIC6.37□□□□□ -1.39
NXF3Q9H4D5 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC6.37□□□□□ -1.39
NXF3Q9H4D5 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC6.37□□□□□ -1.39
NXF3Q9H4D5 AC010547.6-201ENST00000571789 193 ntBASIC6.37□□□□□ -1.39
NXF3Q9H4D5 SNORD95-201ENST00000579879 68 ntBASIC6.37□□□□□ -1.39
NXF3Q9H4D5 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC6.37□□□□□ -1.39
NXF3Q9H4D5 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC6.37□□□□□ -1.39
NXF3Q9H4D5 AL352984.2-201ENST00000611153 546 ntBASIC6.37□□□□□ -1.39
NXF3Q9H4D5 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC6.37□□□□□ -1.39
NXF3Q9H4D5 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC6.37□□□□□ -1.39
NXF3Q9H4D5 DTNA-207ENST00000444659 6343 ntAPPRIS ALT2 TSL 5 BASIC6.37□□□□□ -1.39
NXF3Q9H4D5 IFRD1-216ENST00000535603 3397 ntTSL 2 BASIC6.37□□□□□ -1.39
NXF3Q9H4D5 MR1-209ENST00000617803 7584 ntTSL 5 BASIC6.37□□□□□ -1.39
NXF3Q9H4D5 KCNQ3-205ENST00000621976 10659 ntAPPRIS ALT2 TSL 5 BASIC6.37□□□□□ -1.39
NXF3Q9H4D5 THAP12P9-201ENST00000503971 2360 ntBASIC6.37□□□□□ -1.39
NXF3Q9H4D5 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC6.37□□□□□ -1.39
NXF3Q9H4D5 TLR10-208ENST00000622002 3673 ntAPPRIS P1 TSL 3 BASIC6.37□□□□□ -1.39
NXF3Q9H4D5 ANO4-201ENST00000392977 3509 ntAPPRIS ALT2 TSL 2 BASIC6.37□□□□□ -1.39
NXF3Q9H4D5 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
NXF3Q9H4D5 KIF27-202ENST00000334204 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
NXF3Q9H4D5 ADAM7-204ENST00000520720 1870 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
NXF3Q9H4D5 CNTN1-204ENST00000547849 3125 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
NXF3Q9H4D5 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
NXF3Q9H4D5 NBEA-207ENST00000537702 4089 ntTSL 2 BASIC6.36□□□□□ -1.39
NXF3Q9H4D5 MIA3-201ENST00000340535 2735 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
NXF3Q9H4D5 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
NXF3Q9H4D5 HCG18-237ENST00000444126 4605 ntTSL 5 BASIC6.36□□□□□ -1.39
NXF3Q9H4D5 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC6.36□□□□□ -1.39
NXF3Q9H4D5 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC6.36□□□□□ -1.39
NXF3Q9H4D5 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
NXF3Q9H4D5 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
NXF3Q9H4D5 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
NXF3Q9H4D5 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
NXF3Q9H4D5 OR2W4P-201ENST00000406496 926 ntBASIC6.36□□□□□ -1.39
NXF3Q9H4D5 LINC01762-201ENST00000423907 454 ntTSL 5 BASIC6.36□□□□□ -1.39
NXF3Q9H4D5 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC6.36□□□□□ -1.39
NXF3Q9H4D5 CUBNP2-201ENST00000443534 1139 ntBASIC6.36□□□□□ -1.39
NXF3Q9H4D5 AC115223.1-201ENST00000466377 870 ntBASIC6.36□□□□□ -1.39
NXF3Q9H4D5 RPSAP37-201ENST00000470913 821 ntBASIC6.36□□□□□ -1.39
NXF3Q9H4D5 SNHG12-207ENST00000475441 444 ntTSL 3 BASIC6.36□□□□□ -1.39
NXF3Q9H4D5 PFN1P6-201ENST00000476786 399 ntBASIC6.36□□□□□ -1.39
NXF3Q9H4D5 AC093719.1-201ENST00000480427 441 ntBASIC6.36□□□□□ -1.39
NXF3Q9H4D5 AC099521.1-201ENST00000482557 334 ntBASIC6.36□□□□□ -1.39
NXF3Q9H4D5 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC6.36□□□□□ -1.39
NXF3Q9H4D5 RN7SKP288-201ENST00000516227 268 ntBASIC6.36□□□□□ -1.39
NXF3Q9H4D5 LINC01602-201ENST00000522992 2109 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
NXF3Q9H4D5 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC6.36□□□□□ -1.39
NXF3Q9H4D5 AP001496.3-201ENST00000580230 913 ntBASIC6.36□□□□□ -1.39
NXF3Q9H4D5 AL589745.2-201ENST00000616366 555 ntTSL 4 BASIC6.36□□□□□ -1.39
NXF3Q9H4D5 RN7SL544P-201ENST00000617232 284 ntBASIC6.36□□□□□ -1.39
NXF3Q9H4D5 RN7SL763P-201ENST00000620922 284 ntBASIC6.36□□□□□ -1.39
NXF3Q9H4D5 CU638689.1-201ENST00000623225 897 ntTSL 3 BASIC6.36□□□□□ -1.39
NXF3Q9H4D5 CU634019.4-201ENST00000623347 897 ntTSL 3 BASIC6.36□□□□□ -1.39
NXF3Q9H4D5 AC087565.3-203ENST00000641018 837 ntBASIC6.36□□□□□ -1.39
NXF3Q9H4D5 OR51Q1-202ENST00000641085 1096 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
NXF3Q9H4D5 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
NXF3Q9H4D5 DLG2-207ENST00000398309 7890 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
NXF3Q9H4D5 MAGEB16-204ENST00000399989 1818 ntAPPRIS P2 TSL 5 BASIC6.36□□□□□ -1.39
NXF3Q9H4D5 CHRM3-AS2-201ENST00000427859 2431 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
NXF3Q9H4D5 BTN3A2-203ENST00000396934 3672 ntAPPRIS ALT2 TSL 2 BASIC6.36□□□□□ -1.39
NXF3Q9H4D5 AC093829.1-201ENST00000506662 1618 ntBASIC6.36□□□□□ -1.39
NXF3Q9H4D5 AC011504.1-201ENST00000623331 4103 ntBASIC6.35□□□□□ -1.39
NXF3Q9H4D5 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC6.35□□□□□ -1.39
NXF3Q9H4D5 CASC11-201ENST00000502463 3301 ntTSL 2 BASIC6.35□□□□□ -1.39
NXF3Q9H4D5 TMEM200A-202ENST00000392429 5017 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
NXF3Q9H4D5 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC6.35□□□□□ -1.39
NXF3Q9H4D5 MDN1-205ENST00000629399 17400 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
NXF3Q9H4D5 CDKAL1-202ENST00000378610 3115 ntAPPRIS P1 TSL 2 BASIC6.35□□□□□ -1.39
NXF3Q9H4D5 ENTPD1-AS1-202ENST00000416301 4241 ntTSL 2 BASIC6.35□□□□□ -1.39
NXF3Q9H4D5 C5orf64-203ENST00000505642 2970 ntTSL 2 BASIC6.35□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 110.9 ms