Protein–RNA interactions for Protein: Q9BY12

SCAPER, S phase cyclin A-associated protein in the endoplasmic reticulum, humanhuman

Predictions only

Length 1,400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPERQ9BY12 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC8.81□□□□□ -1
SCAPERQ9BY12 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC8.81□□□□□ -1
SCAPERQ9BY12 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC8.81□□□□□ -1
SCAPERQ9BY12 PPATP2-201ENST00000605635 508 ntBASIC8.81□□□□□ -1
SCAPERQ9BY12 AL049539.1-201ENST00000611964 459 ntBASIC8.81□□□□□ -1
SCAPERQ9BY12 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC8.81□□□□□ -1
SCAPERQ9BY12 HSDL2-201ENST00000398803 2983 ntTSL 1 (best) BASIC8.81□□□□□ -1
SCAPERQ9BY12 IPO8-209ENST00000544829 3212 ntTSL 2 BASIC8.81□□□□□ -1
SCAPERQ9BY12 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC8.81□□□□□ -1
SCAPERQ9BY12 AC007938.2-201ENST00000604666 2634 ntBASIC8.81□□□□□ -1
SCAPERQ9BY12 IL20-202ENST00000367098 1553 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
SCAPERQ9BY12 AC011369.2-201ENST00000624423 1567 ntBASIC8.81□□□□□ -1
SCAPERQ9BY12 ZNF462-201ENST00000277225 10414 ntAPPRIS P2 TSL 1 (best) BASIC8.81□□□□□ -1
SCAPERQ9BY12 DDX6-208ENST00000620157 6152 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
SCAPERQ9BY12 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC8.81□□□□□ -1
SCAPERQ9BY12 AL627309.5-201ENST00000484859 4860 ntTSL 5 BASIC8.81□□□□□ -1
SCAPERQ9BY12 MID1-205ENST00000380785 6092 ntAPPRIS P1 TSL 2 BASIC8.81□□□□□ -1
SCAPERQ9BY12 AC105749.1-201ENST00000631338 2008 ntBASIC8.81□□□□□ -1
SCAPERQ9BY12 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC8.8□□□□□ -1
SCAPERQ9BY12 ZNF292-202ENST00000369577 10610 ntAPPRIS P2 TSL 1 (best) BASIC8.8□□□□□ -1
SCAPERQ9BY12 RPL7P39-201ENST00000481157 744 ntBASIC8.8□□□□□ -1
SCAPERQ9BY12 AC090638.1-201ENST00000498296 909 ntBASIC8.8□□□□□ -1
SCAPERQ9BY12 AC147055.3-201ENST00000510547 851 ntBASIC8.8□□□□□ -1
SCAPERQ9BY12 KCTD9P4-201ENST00000526766 1166 ntBASIC8.8□□□□□ -1
SCAPERQ9BY12 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC8.8□□□□□ -1
SCAPERQ9BY12 AC087477.5-202ENST00000560242 389 ntTSL 3 BASIC8.8□□□□□ -1
SCAPERQ9BY12 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC8.8□□□□□ -1
SCAPERQ9BY12 TTN-AS1-219ENST00000586707 834 ntTSL 5 BASIC8.8□□□□□ -1
SCAPERQ9BY12 MIR6820-201ENST00000611508 62 ntBASIC8.8□□□□□ -1
SCAPERQ9BY12 GPN1-205ENST00000458167 1618 ntTSL 2 BASIC8.8□□□□□ -1
SCAPERQ9BY12 PDZRN4-201ENST00000298919 3411 ntTSL 2 BASIC8.8□□□□□ -1
SCAPERQ9BY12 USP32-214ENST00000592339 4045 ntTSL 1 (best) BASIC8.8□□□□□ -1
SCAPERQ9BY12 ZNF652-201ENST00000362063 5988 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
SCAPERQ9BY12 AC087516.1-201ENST00000561236 2428 ntBASIC8.8□□□□□ -1
SCAPERQ9BY12 HSD17B13-201ENST00000302219 2269 ntTSL 1 (best) BASIC8.8□□□□□ -1
SCAPERQ9BY12 SYTL2-220ENST00000529581 1910 ntTSL 2 BASIC8.8□□□□□ -1
SCAPERQ9BY12 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC8.8□□□□□ -1
SCAPERQ9BY12 DCP1A-206ENST00000610213 5994 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
SCAPERQ9BY12 INTS2-207ENST00000617492 5805 ntTSL 5 BASIC8.8□□□□□ -1
SCAPERQ9BY12 ZNF720-202ENST00000398696 1339 ntTSL 4 BASIC8.8□□□□□ -1
SCAPERQ9BY12 AC093010.2-202ENST00000493033 3023 ntTSL 2 BASIC8.8□□□□□ -1
SCAPERQ9BY12 SATL1-202ENST00000509231 2224 ntTSL 1 (best) BASIC8.8□□□□□ -1
SCAPERQ9BY12 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC8.8□□□□□ -1
SCAPERQ9BY12 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
SCAPERQ9BY12 FAM32BP-201ENST00000344033 333 ntBASIC8.8□□□□□ -1
SCAPERQ9BY12 RNA5SP319-201ENST00000362768 119 ntBASIC8.8□□□□□ -1
SCAPERQ9BY12 MIR765-201ENST00000390226 114 ntBASIC8.8□□□□□ -1
SCAPERQ9BY12 LINC01687-201ENST00000416327 795 ntTSL 3 BASIC8.8□□□□□ -1
SCAPERQ9BY12 ELOCP3-201ENST00000439303 348 ntBASIC8.8□□□□□ -1
SCAPERQ9BY12 AL663074.2-201ENST00000440621 479 ntBASIC8.8□□□□□ -1
SCAPERQ9BY12 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC8.8□□□□□ -1
SCAPERQ9BY12 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC8.8□□□□□ -1
SCAPERQ9BY12 AC021678.3-201ENST00000517893 476 ntBASIC8.8□□□□□ -1
SCAPERQ9BY12 AL049779.2-201ENST00000553847 315 ntBASIC8.8□□□□□ -1
SCAPERQ9BY12 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC8.8□□□□□ -1
SCAPERQ9BY12 Metazoa_SRP.170-201ENST00000616060 254 ntBASIC8.8□□□□□ -1
SCAPERQ9BY12 FAM240A-201ENST00000444264 1826 ntAPPRIS P2 TSL 2 BASIC8.8□□□□□ -1
SCAPERQ9BY12 FAM240A-202ENST00000640551 1826 ntAPPRIS ALT2 TSL 2 BASIC8.8□□□□□ -1
SCAPERQ9BY12 PHEX-AS1-201ENST00000424650 1906 ntTSL 2 BASIC8.79□□□□□ -1
SCAPERQ9BY12 DPY19L3-202ENST00000392250 5998 ntAPPRIS P1 TSL 5 BASIC8.79□□□□□ -1
SCAPERQ9BY12 NSUN4-208ENST00000498008 3867 ntTSL 2 BASIC8.79□□□□□ -1
SCAPERQ9BY12 ITPR1-202ENST00000354582 10242 ntTSL 5 BASIC8.79□□□□□ -1
SCAPERQ9BY12 KCNAB1-212ENST00000490337 3122 ntTSL 1 (best) BASIC8.79□□□□□ -1
SCAPERQ9BY12 SEMA3A-204ENST00000436949 2550 ntAPPRIS P1 TSL 5 BASIC8.79□□□□□ -1
SCAPERQ9BY12 ADGRL3-206ENST00000507164 4982 ntTSL 5 BASIC8.79□□□□□ -1
SCAPERQ9BY12 AC010401.2-201ENST00000575137 4934 ntBASIC8.79□□□□□ -1
SCAPERQ9BY12 IARS-213ENST00000627121 4587 ntTSL 5 BASIC8.79□□□□□ -1
SCAPERQ9BY12 KALRN-204ENST00000360013 10806 ntAPPRIS P5 TSL 5 BASIC8.79□□□□□ -1
SCAPERQ9BY12 TTC39B-208ENST00000512701 10483 ntAPPRIS P3 TSL 2 BASIC8.79□□□□□ -1
SCAPERQ9BY12 GAPDHP42-201ENST00000406848 981 ntBASIC8.79□□□□□ -1
SCAPERQ9BY12 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC8.79□□□□□ -1
SCAPERQ9BY12 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC8.79□□□□□ -1
SCAPERQ9BY12 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC8.79□□□□□ -1
SCAPERQ9BY12 AC000095.2-201ENST00000424407 768 ntTSL 2 BASIC8.79□□□□□ -1
SCAPERQ9BY12 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC8.79□□□□□ -1
SCAPERQ9BY12 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC8.79□□□□□ -1
SCAPERQ9BY12 AL022237.1-201ENST00000446663 358 ntBASIC8.79□□□□□ -1
SCAPERQ9BY12 AC087672.1-201ENST00000479876 766 ntBASIC8.79□□□□□ -1
SCAPERQ9BY12 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC8.79□□□□□ -1
SCAPERQ9BY12 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC8.79□□□□□ -1
SCAPERQ9BY12 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC8.79□□□□□ -1
SCAPERQ9BY12 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC8.79□□□□□ -1
SCAPERQ9BY12 AC133644.2-201ENST00000608142 540 ntBASIC8.79□□□□□ -1
SCAPERQ9BY12 ADA2-210ENST00000610390 4137 ntTSL 5 BASIC8.79□□□□□ -1
SCAPERQ9BY12 LINC01505-205ENST00000636028 2298 ntTSL 5 BASIC8.79□□□□□ -1
SCAPERQ9BY12 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC8.78□□□□□ -1
SCAPERQ9BY12 OR5A2-201ENST00000302040 6318 ntAPPRIS P1 BASIC8.78□□□□□ -1
SCAPERQ9BY12 MEIOC-202ENST00000409464 4067 ntAPPRIS ALT2 TSL 2 BASIC8.78□□□□□ -1
SCAPERQ9BY12 ALS2-201ENST00000264276 6644 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
SCAPERQ9BY12 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC8.78□□□□□ -1
SCAPERQ9BY12 EYA3-204ENST00000436342 5943 ntTSL 2 BASIC8.78□□□□□ -1
SCAPERQ9BY12 MDGA2-201ENST00000357362 2965 ntTSL 5 BASIC8.78□□□□□ -1
SCAPERQ9BY12 AL161912.4-201ENST00000623889 2468 ntBASIC8.78□□□□□ -1
SCAPERQ9BY12 TRRAP-207ENST00000628380 12644 ntAPPRIS ALT2 TSL 5 BASIC8.78□□□□□ -1
SCAPERQ9BY12 SCOC-204ENST00000394205 1964 ntTSL 2 BASIC8.78□□□□□ -1
SCAPERQ9BY12 BRD7P6-201ENST00000431406 1860 ntBASIC8.78□□□□□ -1
SCAPERQ9BY12 NOX4-211ENST00000528341 1899 ntTSL 2 BASIC8.78□□□□□ -1
SCAPERQ9BY12 NBPF12-204ENST00000613714 2701 ntTSL 5 BASIC8.78□□□□□ -1
SCAPERQ9BY12 AC068189.1-201ENST00000501164 2632 ntTSL 2 BASIC8.78□□□□□ -1
SCAPERQ9BY12 NBPF11-202ENST00000614015 4630 ntAPPRIS P2 TSL 2 BASIC8.78□□□□□ -1
Retrieved 100 of 98,524 protein–RNA pairs in 85.7 ms