Protein–RNA interactions for Protein: Q96JB5

CDK5RAP3, CDK5 regulatory subunit-associated protein 3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3Q96JB5 CSNK1G1-202ENST00000561349 1756 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
CDK5RAP3Q96JB5 UQCC1-208ENST00000397554 3638 ntTSL 2 BASIC6.98□□□□□ -1.29
CDK5RAP3Q96JB5 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC6.98□□□□□ -1.29
CDK5RAP3Q96JB5 RNU4-39P-201ENST00000362455 127 ntBASIC6.98□□□□□ -1.29
CDK5RAP3Q96JB5 AL360271.1-201ENST00000395679 510 ntBASIC6.98□□□□□ -1.29
CDK5RAP3Q96JB5 MTND4LP17-201ENST00000414607 293 ntBASIC6.98□□□□□ -1.29
CDK5RAP3Q96JB5 AC018878.1-201ENST00000419904 433 ntTSL 3 BASIC6.98□□□□□ -1.29
CDK5RAP3Q96JB5 ARAFP1-201ENST00000422172 605 ntBASIC6.98□□□□□ -1.29
CDK5RAP3Q96JB5 UBE2V1P6-201ENST00000430840 422 ntBASIC6.98□□□□□ -1.29
CDK5RAP3Q96JB5 IGLV3-4-201ENST00000432300 244 ntBASIC6.98□□□□□ -1.29
CDK5RAP3Q96JB5 HCG14-201ENST00000444986 413 ntTSL 2 BASIC6.98□□□□□ -1.29
CDK5RAP3Q96JB5 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC6.98□□□□□ -1.29
CDK5RAP3Q96JB5 HIGD1AP16-201ENST00000450986 258 ntBASIC6.98□□□□□ -1.29
CDK5RAP3Q96JB5 RPL7L1P3-201ENST00000455249 689 ntBASIC6.98□□□□□ -1.29
CDK5RAP3Q96JB5 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC6.98□□□□□ -1.29
CDK5RAP3Q96JB5 AL022319.1-201ENST00000458183 1167 ntBASIC6.98□□□□□ -1.29
CDK5RAP3Q96JB5 RN7SL552P-201ENST00000462094 276 ntBASIC6.98□□□□□ -1.29
CDK5RAP3Q96JB5 AC092590.1-201ENST00000471672 737 ntTSL 3 BASIC6.98□□□□□ -1.29
CDK5RAP3Q96JB5 SH2D1A-203ENST00000477673 461 ntTSL 2 BASIC6.98□□□□□ -1.29
CDK5RAP3Q96JB5 PPP1R11P1-201ENST00000486095 376 ntBASIC6.98□□□□□ -1.29
CDK5RAP3Q96JB5 SNX18P25-201ENST00000510539 758 ntBASIC6.98□□□□□ -1.29
CDK5RAP3Q96JB5 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC6.98□□□□□ -1.29
CDK5RAP3Q96JB5 NPM1P52-201ENST00000518264 846 ntBASIC6.98□□□□□ -1.29
CDK5RAP3Q96JB5 AP001858.2-201ENST00000536213 601 ntBASIC6.98□□□□□ -1.29
CDK5RAP3Q96JB5 AC078922.1-201ENST00000547547 434 ntTSL 3 BASIC6.98□□□□□ -1.29
CDK5RAP3Q96JB5 AC123567.2-202ENST00000550759 446 ntTSL 3 BASIC6.98□□□□□ -1.29
CDK5RAP3Q96JB5 AC022523.1-201ENST00000560360 364 ntTSL 5 BASIC6.98□□□□□ -1.29
CDK5RAP3Q96JB5 RN7SL230P-201ENST00000580835 303 ntBASIC6.98□□□□□ -1.29
CDK5RAP3Q96JB5 AC099654.15-201ENST00000639802 509 ntBASIC6.98□□□□□ -1.29
CDK5RAP3Q96JB5 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
CDK5RAP3Q96JB5 AP003486.1-201ENST00000525716 3994 ntBASIC6.98□□□□□ -1.29
CDK5RAP3Q96JB5 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC6.98□□□□□ -1.29
CDK5RAP3Q96JB5 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC6.98□□□□□ -1.29
CDK5RAP3Q96JB5 C5orf64-203ENST00000505642 2970 ntTSL 2 BASIC6.98□□□□□ -1.29
CDK5RAP3Q96JB5 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC6.98□□□□□ -1.29
CDK5RAP3Q96JB5 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC6.98□□□□□ -1.29
CDK5RAP3Q96JB5 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC6.98□□□□□ -1.29
CDK5RAP3Q96JB5 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
CDK5RAP3Q96JB5 PKN2-202ENST00000370513 2890 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
CDK5RAP3Q96JB5 GBA3-206ENST00000610628 2154 ntAPPRIS ALT2 TSL 5 BASIC6.98□□□□□ -1.29
CDK5RAP3Q96JB5 ZNF227-201ENST00000313040 3043 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
CDK5RAP3Q96JB5 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
CDK5RAP3Q96JB5 AC087258.1-203ENST00000545400 1629 ntTSL 2 BASIC6.98□□□□□ -1.29
CDK5RAP3Q96JB5 RXFP1-211ENST00000613319 3771 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
CDK5RAP3Q96JB5 ERI2-206ENST00000563117 2903 ntTSL 2 BASIC6.97□□□□□ -1.29
CDK5RAP3Q96JB5 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC6.97□□□□□ -1.29
CDK5RAP3Q96JB5 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
CDK5RAP3Q96JB5 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC6.97□□□□□ -1.29
CDK5RAP3Q96JB5 AP000547.3-204ENST00000588548 2523 ntBASIC6.97□□□□□ -1.29
CDK5RAP3Q96JB5 AL442128.2-201ENST00000620246 1824 ntBASIC6.97□□□□□ -1.29
CDK5RAP3Q96JB5 ZNF184-202ENST00000377419 2899 ntAPPRIS P1 TSL 4 BASIC6.97□□□□□ -1.29
CDK5RAP3Q96JB5 TEK-202ENST00000406359 3935 ntTSL 2 BASIC6.97□□□□□ -1.29
CDK5RAP3Q96JB5 TNP1-201ENST00000236979 407 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
CDK5RAP3Q96JB5 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
CDK5RAP3Q96JB5 TINAG-203ENST00000370869 782 ntTSL 3 BASIC6.97□□□□□ -1.29
CDK5RAP3Q96JB5 SSX3-202ENST00000376893 800 ntTSL 2 BASIC6.97□□□□□ -1.29
CDK5RAP3Q96JB5 SLC3A1-203ENST00000409294 792 ntTSL 2 BASIC6.97□□□□□ -1.29
CDK5RAP3Q96JB5 AL451081.1-201ENST00000413159 245 ntTSL 3 BASIC6.97□□□□□ -1.29
CDK5RAP3Q96JB5 VN1R31P-201ENST00000417498 730 ntBASIC6.97□□□□□ -1.29
CDK5RAP3Q96JB5 AL121823.1-201ENST00000418369 741 ntTSL 3 BASIC6.97□□□□□ -1.29
CDK5RAP3Q96JB5 AC074035.1-201ENST00000420725 1184 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
CDK5RAP3Q96JB5 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC6.97□□□□□ -1.29
CDK5RAP3Q96JB5 LCE6A-201ENST00000431011 628 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
CDK5RAP3Q96JB5 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
CDK5RAP3Q96JB5 AC000124.1-201ENST00000448311 957 ntTSL 2 BASIC6.97□□□□□ -1.29
CDK5RAP3Q96JB5 AC073594.1-201ENST00000462065 364 ntBASIC6.97□□□□□ -1.29
CDK5RAP3Q96JB5 AC018450.1-202ENST00000465880 529 ntTSL 4 BASIC6.97□□□□□ -1.29
CDK5RAP3Q96JB5 AC015908.1-201ENST00000478739 476 ntBASIC6.97□□□□□ -1.29
CDK5RAP3Q96JB5 AC104629.1-201ENST00000494226 508 ntBASIC6.97□□□□□ -1.29
CDK5RAP3Q96JB5 AC113367.2-201ENST00000505749 160 ntBASIC6.97□□□□□ -1.29
CDK5RAP3Q96JB5 GUSBP9-201ENST00000510138 584 ntBASIC6.97□□□□□ -1.29
CDK5RAP3Q96JB5 AC124854.1-201ENST00000512210 511 ntTSL 3 BASIC6.97□□□□□ -1.29
CDK5RAP3Q96JB5 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC6.97□□□□□ -1.29
CDK5RAP3Q96JB5 AC093763.1-201ENST00000512464 699 ntTSL 3 BASIC6.97□□□□□ -1.29
CDK5RAP3Q96JB5 AC116917.1-201ENST00000520558 305 ntBASIC6.97□□□□□ -1.29
CDK5RAP3Q96JB5 AC090115.2-201ENST00000548060 883 ntBASIC6.97□□□□□ -1.29
CDK5RAP3Q96JB5 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC6.97□□□□□ -1.29
CDK5RAP3Q96JB5 AL157871.6-201ENST00000553954 206 ntTSL 2 BASIC6.97□□□□□ -1.29
CDK5RAP3Q96JB5 AL139354.1-201ENST00000554319 645 ntTSL 5 BASIC6.97□□□□□ -1.29
CDK5RAP3Q96JB5 TSSK4-207ENST00000556621 896 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
CDK5RAP3Q96JB5 AC009063.2-203ENST00000567860 745 ntTSL 2 BASIC6.97□□□□□ -1.29
CDK5RAP3Q96JB5 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC6.97□□□□□ -1.29
CDK5RAP3Q96JB5 TTC39C-AS1-201ENST00000579713 817 ntTSL 5 BASIC6.97□□□□□ -1.29
CDK5RAP3Q96JB5 TTN-AS1-219ENST00000586707 834 ntTSL 5 BASIC6.97□□□□□ -1.29
CDK5RAP3Q96JB5 RNU6-84P-201ENST00000607737 102 ntBASIC6.97□□□□□ -1.29
CDK5RAP3Q96JB5 AC004921.1-201ENST00000608884 733 ntTSL 5 BASIC6.97□□□□□ -1.29
CDK5RAP3Q96JB5 AL161457.2-204ENST00000609241 869 ntTSL 5 BASIC6.97□□□□□ -1.29
CDK5RAP3Q96JB5 AC022106.1-201ENST00000612834 766 ntBASIC6.97□□□□□ -1.29
CDK5RAP3Q96JB5 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC6.97□□□□□ -1.29
CDK5RAP3Q96JB5 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
CDK5RAP3Q96JB5 AC024651.2-201ENST00000562480 2098 ntBASIC6.97□□□□□ -1.29
CDK5RAP3Q96JB5 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
CDK5RAP3Q96JB5 AL133243.2-201ENST00000610331 1621 ntBASIC6.97□□□□□ -1.29
CDK5RAP3Q96JB5 SOS1-201ENST00000395038 4123 ntAPPRIS ALT2 TSL 5 BASIC6.97□□□□□ -1.29
CDK5RAP3Q96JB5 AKAP17BP-201ENST00000431706 2719 ntBASIC6.97□□□□□ -1.29
CDK5RAP3Q96JB5 ODF2-205ENST00000393527 3653 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
CDK5RAP3Q96JB5 KIAA2012-205ENST00000541917 3543 ntAPPRIS P2 TSL 5 BASIC6.97□□□□□ -1.29
CDK5RAP3Q96JB5 ZNF727-201ENST00000456806 1679 ntAPPRIS P1 TSL 4 BASIC6.96□□□□□ -1.29
CDK5RAP3Q96JB5 CABYR-207ENST00000486759 1664 ntAPPRIS P4 TSL 5 BASIC6.96□□□□□ -1.29
CDK5RAP3Q96JB5 NRG3-202ENST00000372142 3136 ntAPPRIS ALT2 TSL 1 (best) BASIC6.96□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 76.2 ms