Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 Metazoa_SRP.38-201ENST00000615981 254 ntBASIC5.89□□□□□ -1.47
PDLIM5Q96HC4 RFPL4AP6-201ENST00000616792 846 ntBASIC5.89□□□□□ -1.47
PDLIM5Q96HC4 AC073488.6-201ENST00000632293 754 ntBASIC5.89□□□□□ -1.47
PDLIM5Q96HC4 AL357140.4-201ENST00000636827 412 ntBASIC5.89□□□□□ -1.47
PDLIM5Q96HC4 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC5.89□□□□□ -1.47
PDLIM5Q96HC4 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
PDLIM5Q96HC4 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC5.89□□□□□ -1.47
PDLIM5Q96HC4 USP40-202ENST00000409945 1946 ntTSL 2 BASIC5.89□□□□□ -1.47
PDLIM5Q96HC4 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
PDLIM5Q96HC4 BTG4-203ENST00000525791 1394 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
PDLIM5Q96HC4 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
PDLIM5Q96HC4 PGBD4-201ENST00000397766 6612 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
PDLIM5Q96HC4 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC5.89□□□□□ -1.47
PDLIM5Q96HC4 THRB-203ENST00000396671 7506 ntAPPRIS P2 TSL 5 BASIC5.89□□□□□ -1.47
PDLIM5Q96HC4 GNL2P1-201ENST00000451274 2190 ntBASIC5.89□□□□□ -1.47
PDLIM5Q96HC4 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC5.89□□□□□ -1.47
PDLIM5Q96HC4 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
PDLIM5Q96HC4 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC5.89□□□□□ -1.47
PDLIM5Q96HC4 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC5.89□□□□□ -1.47
PDLIM5Q96HC4 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC5.89□□□□□ -1.47
PDLIM5Q96HC4 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC5.88□□□□□ -1.47
PDLIM5Q96HC4 ZNF532-201ENST00000336078 6696 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
PDLIM5Q96HC4 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC5.88□□□□□ -1.47
PDLIM5Q96HC4 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC5.88□□□□□ -1.47
PDLIM5Q96HC4 DCC-202ENST00000412726 9525 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
PDLIM5Q96HC4 TMEM31-201ENST00000319560 728 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
PDLIM5Q96HC4 RNA5SP211-201ENST00000365516 117 ntBASIC5.88□□□□□ -1.47
PDLIM5Q96HC4 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
PDLIM5Q96HC4 IFNB1-201ENST00000380232 859 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
PDLIM5Q96HC4 ST7-204ENST00000393444 2113 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
PDLIM5Q96HC4 DNAJA1P3-201ENST00000399417 1194 ntBASIC5.88□□□□□ -1.47
PDLIM5Q96HC4 AL132875.1-201ENST00000403623 949 ntBASIC5.88□□□□□ -1.47
PDLIM5Q96HC4 RPA3-204ENST00000406109 434 ntTSL 3 BASIC5.88□□□□□ -1.47
PDLIM5Q96HC4 AL512622.1-201ENST00000414106 481 ntTSL 3 BASIC5.88□□□□□ -1.47
PDLIM5Q96HC4 AL109610.1-201ENST00000414598 431 ntTSL 3 BASIC5.88□□□□□ -1.47
PDLIM5Q96HC4 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC5.88□□□□□ -1.47
PDLIM5Q96HC4 PTP4A1P1-201ENST00000420539 515 ntBASIC5.88□□□□□ -1.47
PDLIM5Q96HC4 NMD3P2-201ENST00000421815 761 ntBASIC5.88□□□□□ -1.47
PDLIM5Q96HC4 ICA1L-210ENST00000425178 879 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
PDLIM5Q96HC4 AC092651.1-201ENST00000426110 312 ntBASIC5.88□□□□□ -1.47
PDLIM5Q96HC4 GAPDHP59-201ENST00000435908 267 ntBASIC5.88□□□□□ -1.47
PDLIM5Q96HC4 AC096632.2-201ENST00000438139 1239 ntBASIC5.88□□□□□ -1.47
PDLIM5Q96HC4 KRT8P51-201ENST00000438938 274 ntBASIC5.88□□□□□ -1.47
PDLIM5Q96HC4 AL136988.2-201ENST00000440729 861 ntTSL 3 BASIC5.88□□□□□ -1.47
PDLIM5Q96HC4 HMGB1P7-201ENST00000450921 612 ntBASIC5.88□□□□□ -1.47
PDLIM5Q96HC4 LINC01456-201ENST00000453902 708 ntTSL 3 BASIC5.88□□□□□ -1.47
PDLIM5Q96HC4 RN7SL254P-201ENST00000460609 284 ntBASIC5.88□□□□□ -1.47
PDLIM5Q96HC4 AC012123.2-201ENST00000485809 248 ntBASIC5.88□□□□□ -1.47
PDLIM5Q96HC4 RPL29P23-201ENST00000486188 442 ntBASIC5.88□□□□□ -1.47
PDLIM5Q96HC4 RN7SKP288-201ENST00000516227 268 ntBASIC5.88□□□□□ -1.47
PDLIM5Q96HC4 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC5.88□□□□□ -1.47
PDLIM5Q96HC4 FAU-203ENST00000525297 355 ntTSL 5 BASIC5.88□□□□□ -1.47
PDLIM5Q96HC4 BCAS2P1-201ENST00000528022 632 ntBASIC5.88□□□□□ -1.47
PDLIM5Q96HC4 AP003033.2-201ENST00000528901 805 ntBASIC5.88□□□□□ -1.47
PDLIM5Q96HC4 AP000722.1-201ENST00000531176 775 ntTSL 3 BASIC5.88□□□□□ -1.47
PDLIM5Q96HC4 MRPS21P8-201ENST00000569196 235 ntBASIC5.88□□□□□ -1.47
PDLIM5Q96HC4 AL163952.1-202ENST00000569625 600 ntBASIC5.88□□□□□ -1.47
PDLIM5Q96HC4 TEX41-218ENST00000596540 882 ntTSL 5 BASIC5.88□□□□□ -1.47
PDLIM5Q96HC4 uc_338.29-201ENST00000615099 168 ntBASIC5.88□□□□□ -1.47
PDLIM5Q96HC4 AL512652.1-201ENST00000619006 500 ntBASIC5.88□□□□□ -1.47
PDLIM5Q96HC4 MIR6813-201ENST00000621638 56 ntBASIC5.88□□□□□ -1.47
PDLIM5Q96HC4 AC025262.3-201ENST00000623666 360 ntBASIC5.88□□□□□ -1.47
PDLIM5Q96HC4 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC5.88□□□□□ -1.47
PDLIM5Q96HC4 AP001153.1-201ENST00000641024 338 ntBASIC5.88□□□□□ -1.47
PDLIM5Q96HC4 MAGI2-222ENST00000636039 5671 ntTSL 5 BASIC5.88□□□□□ -1.47
PDLIM5Q96HC4 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
PDLIM5Q96HC4 RASSF8-216ENST00000615708 1328 ntTSL 5 BASIC5.88□□□□□ -1.47
PDLIM5Q96HC4 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
PDLIM5Q96HC4 FCGR3B-208ENST00000613418 2251 ntTSL 5 BASIC5.88□□□□□ -1.47
PDLIM5Q96HC4 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
PDLIM5Q96HC4 RBM22-202ENST00000447771 1386 ntTSL 2 BASIC5.88□□□□□ -1.47
PDLIM5Q96HC4 AC016747.4-201ENST00000462959 1383 ntTSL 2 BASIC5.88□□□□□ -1.47
PDLIM5Q96HC4 WDR95P-201ENST00000425638 1542 ntBASIC5.88□□□□□ -1.47
PDLIM5Q96HC4 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC5.88□□□□□ -1.47
PDLIM5Q96HC4 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
PDLIM5Q96HC4 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC5.88□□□□□ -1.47
PDLIM5Q96HC4 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
PDLIM5Q96HC4 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
PDLIM5Q96HC4 DDX6-207ENST00000617381 2883 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
PDLIM5Q96HC4 P2RY14-202ENST00000424796 1780 ntAPPRIS P1 TSL 2 BASIC5.88□□□□□ -1.47
PDLIM5Q96HC4 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
PDLIM5Q96HC4 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC5.87□□□□□ -1.47
PDLIM5Q96HC4 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC5.87□□□□□ -1.47
PDLIM5Q96HC4 ANK2-201ENST00000264366 11775 ntAPPRIS ALT2 TSL 5 BASIC5.87□□□□□ -1.47
PDLIM5Q96HC4 AL731532.1-201ENST00000623972 4236 ntBASIC5.87□□□□□ -1.47
PDLIM5Q96HC4 ZNF311-203ENST00000377179 2730 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
PDLIM5Q96HC4 TERB2-201ENST00000340827 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
PDLIM5Q96HC4 LIX1L-AS1-202ENST00000412239 570 ntTSL 2 BASIC5.87□□□□□ -1.47
PDLIM5Q96HC4 RPL35AP3-201ENST00000414680 288 ntBASIC5.87□□□□□ -1.47
PDLIM5Q96HC4 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC5.87□□□□□ -1.47
PDLIM5Q96HC4 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC5.87□□□□□ -1.47
PDLIM5Q96HC4 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC5.87□□□□□ -1.47
PDLIM5Q96HC4 NPSR1-AS1-206ENST00000439852 710 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
PDLIM5Q96HC4 RPL5P7-201ENST00000444235 813 ntBASIC5.87□□□□□ -1.47
PDLIM5Q96HC4 AC097463.1-201ENST00000447288 481 ntBASIC5.87□□□□□ -1.47
PDLIM5Q96HC4 AL590399.3-202ENST00000448491 495 ntTSL 5 BASIC5.87□□□□□ -1.47
PDLIM5Q96HC4 OR6C72P-201ENST00000451403 892 ntBASIC5.87□□□□□ -1.47
PDLIM5Q96HC4 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC5.87□□□□□ -1.47
PDLIM5Q96HC4 OSTCP1-201ENST00000455507 450 ntBASIC5.87□□□□□ -1.47
PDLIM5Q96HC4 AC104164.1-201ENST00000460282 590 ntBASIC5.87□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 68.4 ms